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The map label for this gene is 156937880

Identifier: 156937880

GI number: 156937880

Start: 974410

End: 975261

Strand: Reverse

Name: 156937880

Synonym: Igni_1092

Alternate gene names: NA

Gene position: 975261-974410 (Counterclockwise)

Preceding gene: 156937883

Following gene: 156937879

Centisome position: 75.16

GC content: 55.99

Gene sequence:

>852_bases
ATGCCCTTCCAGATAGACCGGCTTAGGTTCGGGCCGGCGGGGATACCGAACTCCGCGAAGAAGAGGAACGTGATAGAGGG
AATAAAGAGAGTGAAGGAACTTGGGTTGGACGCCATGGAGCTTGAGTTCGTCAGGGGAGTTAGGATGAGTGAGGAGAAGG
CCAGGGAGGCGGGCAAGGTGGCTAGGGAGCTGGACGTGGTGTTGACCGCCCACGCCCCTTACTACGTAAACCTCGCCTCG
CCGGAGGAGGAGAAGAGGAAGAGGAGCATAGAGTACATAGTCCAAAGCGCTAAGGTCCTCCACGCCGCCGGAGGGTGGAG
CGTGGTCTTCCACCCCGGGTGGTACATGAAGAAGGCCCCCTCCGTAGTGTACAAGAGGATCAGGGACGCCTTGGCGGAGG
TAGTGGAGAGGGTGAAGGAGCTCGGGCTGGACGTGTGGATAAGGCCAGAAACTATGGAGCTGAAGAGCAAGTTCGGCTCA
CTGGACGAGGTCATAAAGCTATCCCAAGAGTTCGACATAGTGCTCCCCTGCGTGGACTTCGCCCACTTGAGGTACAGGGA
GGGCTGGAACAGCAAGGAGGAGTTTAGGGCGGTCCTCGAGAAGCTGGAGAAGGAGTTGGGAAGGTTCGCCTTGGACAACA
TGCACATTCACGTCTCCGGGATAAAGCTGGACAAGCACGGAACCCACTTGAACTTGGAGGAGTCAGACATGAGGTGGAAA
GAGTTACTGGAGGTGTTGAAGGAGTTCAACGTTAAGGGAGTTCTCATAAGTGAGTCACCGAACTTGGAGGAGGACGCGGT
AATGATGAAGAAGTACTGGTACCAACTGTCAATATTTACTCCCGCGGGCTGA

Upstream 100 bases:

>100_bases
AACGACTTCCACTTCGACGTCCCCGCGAGGGCCTCGGACGGGACTTTAGAAGGCTTTTCGAATTAAAGTTAGGCCGGCCT
AAGGCCTCGCGGGCGACCTC

Downstream 100 bases:

>100_bases
GAGTTTTTAGGGACAAGGGGATGCACGAGACCTTAAAGAAGATAATAGAAATAGTTGAGGCCCACGACGAGTGGAGGCAC
CAAACGATAAACCTCATAGC

Product: endonuclease IV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MPFQIDRLRFGPAGIPNSAKKRNVIEGIKRVKELGLDAMELEFVRGVRMSEEKAREAGKVARELDVVLTAHAPYYVNLAS
PEEEKRKRSIEYIVQSAKVLHAAGGWSVVFHPGWYMKKAPSVVYKRIRDALAEVVERVKELGLDVWIRPETMELKSKFGS
LDEVIKLSQEFDIVLPCVDFAHLRYREGWNSKEEFRAVLEKLEKELGRFALDNMHIHVSGIKLDKHGTHLNLEESDMRWK
ELLEVLKEFNVKGVLISESPNLEEDAVMMKKYWYQLSIFTPAG

Sequences:

>Translated_283_residues
MPFQIDRLRFGPAGIPNSAKKRNVIEGIKRVKELGLDAMELEFVRGVRMSEEKAREAGKVARELDVVLTAHAPYYVNLAS
PEEEKRKRSIEYIVQSAKVLHAAGGWSVVFHPGWYMKKAPSVVYKRIRDALAEVVERVKELGLDVWIRPETMELKSKFGS
LDEVIKLSQEFDIVLPCVDFAHLRYREGWNSKEEFRAVLEKLEKELGRFALDNMHIHVSGIKLDKHGTHLNLEESDMRWK
ELLEVLKEFNVKGVLISESPNLEEDAVMMKKYWYQLSIFTPAG
>Mature_282_residues
PFQIDRLRFGPAGIPNSAKKRNVIEGIKRVKELGLDAMELEFVRGVRMSEEKAREAGKVARELDVVLTAHAPYYVNLASP
EEEKRKRSIEYIVQSAKVLHAAGGWSVVFHPGWYMKKAPSVVYKRIRDALAEVVERVKELGLDVWIRPETMELKSKFGSL
DEVIKLSQEFDIVLPCVDFAHLRYREGWNSKEEFRAVLEKLEKELGRFALDNMHIHVSGIKLDKHGTHLNLEESDMRWKE
LLEVLKEFNVKGVLISESPNLEEDAVMMKKYWYQLSIFTPAG

Specific function: Unknown

COG id: COG0648

COG function: function code L; Endonuclease IV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001719
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: 3.1.21.2

Molecular weight: Translated: 32608; Mature: 32477

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFQIDRLRFGPAGIPNSAKKRNVIEGIKRVKELGLDAMELEFVRGVRMSEEKAREAGKV
CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
ARELDVVLTAHAPYYVNLASPEEEKRKRSIEYIVQSAKVLHAAGGWSVVFHPGWYMKKAP
HHHHHEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCHHHCH
SVVYKRIRDALAEVVERVKELGLDVWIRPETMELKSKFGSLDEVIKLSQEFDIVLPCVDF
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHCCCEEECHHHH
AHLRYREGWNSKEEFRAVLEKLEKELGRFALDNMHIHVSGIKLDKHGTHLNLEESDMRWK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCHHHHHHH
ELLEVLKEFNVKGVLISESPNLEEDAVMMKKYWYQLSIFTPAG
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEEEEEECCCC
>Mature Secondary Structure 
PFQIDRLRFGPAGIPNSAKKRNVIEGIKRVKELGLDAMELEFVRGVRMSEEKAREAGKV
CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
ARELDVVLTAHAPYYVNLASPEEEKRKRSIEYIVQSAKVLHAAGGWSVVFHPGWYMKKAP
HHHHHEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCCHHHCH
SVVYKRIRDALAEVVERVKELGLDVWIRPETMELKSKFGSLDEVIKLSQEFDIVLPCVDF
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHCCCEEECHHHH
AHLRYREGWNSKEEFRAVLEKLEKELGRFALDNMHIHVSGIKLDKHGTHLNLEESDMRWK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCHHHHHHH
ELLEVLKEFNVKGVLISESPNLEEDAVMMKKYWYQLSIFTPAG
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]