| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937831
Identifier: 156937831
GI number: 156937831
Start: 929696
End: 930160
Strand: Reverse
Name: 156937831
Synonym: Igni_1042
Alternate gene names: NA
Gene position: 930160-929696 (Counterclockwise)
Preceding gene: 156937833
Following gene: 156937830
Centisome position: 71.69
GC content: 56.34
Gene sequence:
>465_bases TTGCGGGGGCGCTCAAACCATAAAGCCTTCCCTTCGAGCCCGTTCGAGGAAGGGGCCATGAGGTTAGTCTTGGTGAAGTA CGATCCGGAGACCGGCGCGAACGCCGTTGTTATAAAGGGCGACATGAACGAGGTGGTGAGGCAGAAGGCCATAGCCGCAT TGAAGGACGAGTGGAAGCCCGAGAGCAAGGACTTTATGATAATGGGGGACTTCGTGGAGTTCGAGTACGAGCTCCCCTTG ACCCCGGAGCAGTACGAAGCGCTGAGCAAGTACGACATGAGGAAGGAGGGGAAGGTAGCGGTGGTGAAGGTGCCTTACTT CGTCATAACCTTCCCCAAGTACGCCTACCAAGGCTCCCCCTACGTAGTTTACTTGGTAGCTCCTTACTTGGACGAGGAAA AGCTTGAGGAGTTAAAGGAGATGGCCGAGCAAGTCTCGGAGGAGGCGTCCAAGCCCCCCGAGTGA
Upstream 100 bases:
>100_bases CCAGGCCGTCGCTGTAGGTGGTATGCACGTGGAGGTCTGCCTTTAGAGCGCGCAAAATGAACCCCACTGAGATTCCGACT TCATTTAAATTTAAGTGACG
Downstream 100 bases:
>100_bases CGTTTTAGAAGCTCAGACCACAACGGTCCCACGGGAAACGCCGTCTTGAGGCTAGTAGAGTTGTTGAAGGTCGATATGAA GGGAAGGATTACCATACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MRGRSNHKAFPSSPFEEGAMRLVLVKYDPETGANAVVIKGDMNEVVRQKAIAALKDEWKPESKDFMIMGDFVEFEYELPL TPEQYEALSKYDMRKEGKVAVVKVPYFVITFPKYAYQGSPYVVYLVAPYLDEEKLEELKEMAEQVSEEASKPPE
Sequences:
>Translated_154_residues MRGRSNHKAFPSSPFEEGAMRLVLVKYDPETGANAVVIKGDMNEVVRQKAIAALKDEWKPESKDFMIMGDFVEFEYELPL TPEQYEALSKYDMRKEGKVAVVKVPYFVITFPKYAYQGSPYVVYLVAPYLDEEKLEELKEMAEQVSEEASKPPE >Mature_154_residues MRGRSNHKAFPSSPFEEGAMRLVLVKYDPETGANAVVIKGDMNEVVRQKAIAALKDEWKPESKDFMIMGDFVEFEYELPL TPEQYEALSKYDMRKEGKVAVVKVPYFVITFPKYAYQGSPYVVYLVAPYLDEEKLEELKEMAEQVSEEASKPPE
Specific function: Unknown
COG id: COG5399
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17656; Mature: 17656
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRSNHKAFPSSPFEEGAMRLVLVKYDPETGANAVVIKGDMNEVVRQKAIAALKDEWKP CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC ESKDFMIMGDFVEFEYELPLTPEQYEALSKYDMRKEGKVAVVKVPYFVITFPKYAYQGSP CCCCEEEEECEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCEEEEECCHHHCCCCC YVVYLVAPYLDEEKLEELKEMAEQVSEEASKPPE EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRGRSNHKAFPSSPFEEGAMRLVLVKYDPETGANAVVIKGDMNEVVRQKAIAALKDEWKP CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC ESKDFMIMGDFVEFEYELPLTPEQYEALSKYDMRKEGKVAVVKVPYFVITFPKYAYQGSP CCCCEEEEECEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCEEEEECCHHHCCCCC YVVYLVAPYLDEEKLEELKEMAEQVSEEASKPPE EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA