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The map label for this gene is yggR [C]

Identifier: 156937799

GI number: 156937799

Start: 899589

End: 901295

Strand: Direct

Name: yggR [C]

Synonym: Igni_1009

Alternate gene names: 156937799

Gene position: 899589-901295 (Clockwise)

Preceding gene: 156937798

Following gene: 156937800

Centisome position: 69.33

GC content: 56.41

Gene sequence:

>1707_bases
TTGGACCGGGGAATAATGCCCACCTTAGCTGAGGTTATAGAGAGCGTCCAAAGGAACTTGGCCGAACTCGCGGAGAGGAT
CAGGGCCAAGAAGCCGGCGGCGGACGTGCTGGAGAGGGCGAGGAGGGAGGGGAGCGGGACGGCGGCGGTGGCGGAGGGGG
GAGCCAGGGTCTTTAGGAGCCTAATACCCCCCGAGAGGCTGATAGACTTCTACTCCGTTAGGCCTCCCTACAGCTACGTA
TTGGTCTACATAGACGAGGAGGACAGGATGAGGTACCACACCATAGAGCCCGTCCTCACCCGGAGGGAGCTCGCGGGGCT
GCTTAGGCTCAAGTCCTTGCTCTACCAAGAGTTCCACGCGAGGGCCGACATACTGAGGGAAACTGTCAAGAACCCGTTGG
AGGCCGGGAGGCTGATAGCTCAAACGGTCAGGAGGATGGCGAGGGACTACGGCCTCAAGCTTCCGGCATTAAGCGTGGAG
AAGATAACTTACTACATAGTGAGGGACACCGTCGGCTACGGGCCCATGGACGTCATAATCAACGACCCGGCGATAGAGGA
CATCTTCTGCGACGGCACCAACTTACCCATATACGTGTGGCACCAGAAGTACGAGTGGCTCAGGAGCAACGTGGTCTGGA
TAGACGAGGACGAGCTGGTGAGGTACGTGAGGAAGTTGGCCGTGAGGGCGGGCAAGGAGCTTAGCTACGCCCAGCCCATA
CTGGACGGCGCCATACCCCCTTGGAAGTATAGGCTCCACGCCACGCACCCAATAGTCACTTATCGAGGGCCCTCCTTCAC
GATAAGGAAGTTCCGCGAGAACCCATTCACCTTGCCCGAGCTCGTTAGGCTCGGGACCATCTCACCCGAAATCGCCGCTT
ACTTGTGGATACTCGTGGACTCCATAAACTCCGCTCTAGTAGTGGGGGCCATGGCCTCTGGGAAAACAACAATGCTAAAC
GCGATCGCTATGATGATACCTCCGGAGAGCAAGATAGTCACCGCAGAGGACACCCCGGAGATAAGGCTCCCCCACGAGAA
CTGGGTAGCTATGGTTACTAGGCCCTCCAACGAGCCCGGCGTAGCCAACATAACTTTGTACGACTTGTTGAAGTCAGCTT
TGAGGCAGAGGCCGGAGTTCATCATCGTAGGAGAGATACGAGGCGAGGAAGCCTTCACCTTCTTCCAAGCGGTCTCCGTG
GGCCACGGGGGCTTGGGGACGGTTCACGGAGAAACTATAGACGCTGCGATAAAGAGGCTAATTACCAAACCTATGGACGT
GCCTAAGGGACTTATACCGTCGGTGAAGGTATTCATTCACATGGCTAGGGTTAAGTACGGCGGCAAGATAGTTAGGAGGG
CGCTGGAGGTAAGGGAAATAATTACCTTGGACGAGAGGGGAGACCTAGTTATGAGCACCGCCTTCAAGTGGGACTACGAG
ACCGACACGTGGAAGGAGGCCCAACACTTGTACCTAATTGAGGACGCGGCCCAGAAGATGCTCATGGACTATCACCAGCT
GTACAACGAGATGAAGAGGAGGGCTGTTGTCATAAAGTGGATGGTGTGGAGGGAGAAAACGTCCGTAAAGGACGTAATGG
AAATAACGAGGAAGTATAGGAGGAACCCCAACGCGGTCTACACTCAAGTAGCCTCGGAGCTGAGGGTGTCGGGGCTGGTG
GAGGAGCTGGAGGTGCTCCCGATATGA

Upstream 100 bases:

>100_bases
CTTGTCCCCAAAAAGTCTTCTTCACTGCCAGCGCCACCTTCGCGGCGGCGGCGACTATAGCGTTAGTAGCTATACTTAAA
GGGAGGGTCGGCAGAAACGT

Downstream 100 bases:

>100_bases
GCACCAAGGTAGTTTTAGAAGAGATCCTCGCGAAGTACGAAAGGAAGAAAAAGAAGGAGCTGGAGGCGCCGAGCCAAATA
TTCTACATCATGTATAGGAT

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MDRGIMPTLAEVIESVQRNLAELAERIRAKKPAADVLERARREGSGTAAVAEGGARVFRSLIPPERLIDFYSVRPPYSYV
LVYIDEEDRMRYHTIEPVLTRRELAGLLRLKSLLYQEFHARADILRETVKNPLEAGRLIAQTVRRMARDYGLKLPALSVE
KITYYIVRDTVGYGPMDVIINDPAIEDIFCDGTNLPIYVWHQKYEWLRSNVVWIDEDELVRYVRKLAVRAGKELSYAQPI
LDGAIPPWKYRLHATHPIVTYRGPSFTIRKFRENPFTLPELVRLGTISPEIAAYLWILVDSINSALVVGAMASGKTTMLN
AIAMMIPPESKIVTAEDTPEIRLPHENWVAMVTRPSNEPGVANITLYDLLKSALRQRPEFIIVGEIRGEEAFTFFQAVSV
GHGGLGTVHGETIDAAIKRLITKPMDVPKGLIPSVKVFIHMARVKYGGKIVRRALEVREIITLDERGDLVMSTAFKWDYE
TDTWKEAQHLYLIEDAAQKMLMDYHQLYNEMKRRAVVIKWMVWREKTSVKDVMEITRKYRRNPNAVYTQVASELRVSGLV
EELEVLPI

Sequences:

>Translated_568_residues
MDRGIMPTLAEVIESVQRNLAELAERIRAKKPAADVLERARREGSGTAAVAEGGARVFRSLIPPERLIDFYSVRPPYSYV
LVYIDEEDRMRYHTIEPVLTRRELAGLLRLKSLLYQEFHARADILRETVKNPLEAGRLIAQTVRRMARDYGLKLPALSVE
KITYYIVRDTVGYGPMDVIINDPAIEDIFCDGTNLPIYVWHQKYEWLRSNVVWIDEDELVRYVRKLAVRAGKELSYAQPI
LDGAIPPWKYRLHATHPIVTYRGPSFTIRKFRENPFTLPELVRLGTISPEIAAYLWILVDSINSALVVGAMASGKTTMLN
AIAMMIPPESKIVTAEDTPEIRLPHENWVAMVTRPSNEPGVANITLYDLLKSALRQRPEFIIVGEIRGEEAFTFFQAVSV
GHGGLGTVHGETIDAAIKRLITKPMDVPKGLIPSVKVFIHMARVKYGGKIVRRALEVREIITLDERGDLVMSTAFKWDYE
TDTWKEAQHLYLIEDAAQKMLMDYHQLYNEMKRRAVVIKWMVWREKTSVKDVMEITRKYRRNPNAVYTQVASELRVSGLV
EELEVLPI
>Mature_568_residues
MDRGIMPTLAEVIESVQRNLAELAERIRAKKPAADVLERARREGSGTAAVAEGGARVFRSLIPPERLIDFYSVRPPYSYV
LVYIDEEDRMRYHTIEPVLTRRELAGLLRLKSLLYQEFHARADILRETVKNPLEAGRLIAQTVRRMARDYGLKLPALSVE
KITYYIVRDTVGYGPMDVIINDPAIEDIFCDGTNLPIYVWHQKYEWLRSNVVWIDEDELVRYVRKLAVRAGKELSYAQPI
LDGAIPPWKYRLHATHPIVTYRGPSFTIRKFRENPFTLPELVRLGTISPEIAAYLWILVDSINSALVVGAMASGKTTMLN
AIAMMIPPESKIVTAEDTPEIRLPHENWVAMVTRPSNEPGVANITLYDLLKSALRQRPEFIIVGEIRGEEAFTFFQAVSV
GHGGLGTVHGETIDAAIKRLITKPMDVPKGLIPSVKVFIHMARVKYGGKIVRRALEVREIITLDERGDLVMSTAFKWDYE
TDTWKEAQHLYLIEDAAQKMLMDYHQLYNEMKRRAVVIKWMVWREKTSVKDVMEITRKYRRNPNAVYTQVASELRVSGLV
EELEVLPI

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 64941; Mature: 64941

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRGIMPTLAEVIESVQRNLAELAERIRAKKPAADVLERARREGSGTAAVAEGGARVFRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHH
LIPPERLIDFYSVRPPYSYVLVYIDEEDRMRYHTIEPVLTRRELAGLLRLKSLLYQEFHA
HCCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RADILRETVKNPLEAGRLIAQTVRRMARDYGLKLPALSVEKITYYIVRDTVGYGPMDVII
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHEEEEEEECCCCCCCEEEEE
NDPAIEDIFCDGTNLPIYVWHQKYEWLRSNVVWIDEDELVRYVRKLAVRAGKELSYAQPI
CCCCCCCEEECCCCCCEEEEEHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCHHHHHH
LDGAIPPWKYRLHATHPIVTYRGPSFTIRKFRENPFTLPELVRLGTISPEIAAYLWILVD
HHCCCCCCEEEEEECCCEEEECCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
SINSALVVGAMASGKTTMLNAIAMMIPPESKIVTAEDTPEIRLPHENWVAMVTRPSNEPG
HCCCCEEEEECCCCCHHHHHHHHHEECCCCCEEEECCCCCEECCCCCCEEEEECCCCCCC
VANITLYDLLKSALRQRPEFIIVGEIRGEEAFTFFQAVSVGHGGLGTVHGETIDAAIKRL
EEEEEHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ITKPMDVPKGLIPSVKVFIHMARVKYGGKIVRRALEVREIITLDERGDLVMSTAFKWDYE
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCC
TDTWKEAQHLYLIEDAAQKMLMDYHQLYNEMKRRAVVIKWMVWREKTSVKDVMEITRKYR
CCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHEEEHHEEHHCCCCHHHHHHHHHHHC
RNPNAVYTQVASELRVSGLVEELEVLPI
CCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRGIMPTLAEVIESVQRNLAELAERIRAKKPAADVLERARREGSGTAAVAEGGARVFRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHH
LIPPERLIDFYSVRPPYSYVLVYIDEEDRMRYHTIEPVLTRRELAGLLRLKSLLYQEFHA
HCCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RADILRETVKNPLEAGRLIAQTVRRMARDYGLKLPALSVEKITYYIVRDTVGYGPMDVII
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHEEEEEEECCCCCCCEEEEE
NDPAIEDIFCDGTNLPIYVWHQKYEWLRSNVVWIDEDELVRYVRKLAVRAGKELSYAQPI
CCCCCCCEEECCCCCCEEEEEHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCCCHHHHHH
LDGAIPPWKYRLHATHPIVTYRGPSFTIRKFRENPFTLPELVRLGTISPEIAAYLWILVD
HHCCCCCCEEEEEECCCEEEECCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHH
SINSALVVGAMASGKTTMLNAIAMMIPPESKIVTAEDTPEIRLPHENWVAMVTRPSNEPG
HCCCCEEEEECCCCCHHHHHHHHHEECCCCCEEEECCCCCEECCCCCCEEEEECCCCCCC
VANITLYDLLKSALRQRPEFIIVGEIRGEEAFTFFQAVSVGHGGLGTVHGETIDAAIKRL
EEEEEHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ITKPMDVPKGLIPSVKVFIHMARVKYGGKIVRRALEVREIITLDERGDLVMSTAFKWDYE
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCC
TDTWKEAQHLYLIEDAAQKMLMDYHQLYNEMKRRAVVIKWMVWREKTSVKDVMEITRKYR
CCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHEEEHHEEHHCCCCHHHHHHHHHHHC
RNPNAVYTQVASELRVSGLVEELEVLPI
CCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]