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The map label for this gene is gap [H]

Identifier: 156937791

GI number: 156937791

Start: 890769

End: 891827

Strand: Direct

Name: gap [H]

Synonym: Igni_1001

Alternate gene names: 156937791

Gene position: 890769-891827 (Clockwise)

Preceding gene: 156937790

Following gene: 156937792

Centisome position: 68.65

GC content: 56.56

Gene sequence:

>1059_bases
TTGAGCGTTAAGGTCGCAGTCAACGGCTTCGGTACTATAGGCAAGAGGGTAGCTGAGGCCGTACTAAAACAAGACGACAT
GACCCTCGTGGGGGTCACGAAGACCAAGCCGGATTACTTGGCAATGATAGCCTCCCGCATGGGCTCGCTCTATGTGCCCG
AAGACAGGGTAGAGAAGTTCCAGAAGGCTGGAATAGAGGTACAAGGAACCTTGAAGGACTTGCTCGAGAAGGTCGACCTC
GTCGTCGACGCCACCCCAGGGGGCGTGGGTAAGGAGTACAAGCCCCTCTACGAGAAGTTCGGAGTGAAAGCCATATTCCA
AGGCGGTGAGAAACACGAGGTCGCGGGCTTCTCGTTCTCGACGCTGTGCAACTACGAGGAGGCGGAGGGGAAGCAGTTCG
CCAGGGTGGTGTCTTGTAACACCACCGGCCTGTTGAGGCTCATATGCGCGTTAAGAAACCACTTCAAAGTGAAGAGCGTC
AGGGCGACCATAATTAGGAGGGGGGCCGATCCGGCGGAGACTAAGAAGGGACCCATAAACGCCATAGTCCCCAACCCGGT
TACCTTGCCCAGCCACCACGGCGTGGACGTCAGAACGGTCTTGCCGGACTTGGACGTCCAGACGGTCGCCGCGGTGGTGC
CGACTACGATAATGCACTCGCACGTACTGAACGTGAGGTTCGAGGAGCCCGTGACCAGAGAGGACGTCTTGAAGGTTCTT
GAAGAAGCTCCCAGGATACTGGTAATCCCCTCCGAACTGAGCGGGGTGAAGGACACCGCTAAGATAATCGAACTCGCCAG
GGACGTCGGGAGGAAGAGGTACGACTTATACGAGCTGGCGATATACGAGGAGAGCGTGAGCGTGGAGGGCGACGAGCTGT
TCCTCATGCAAGCCGTCCACCAAGAAAGCATAGTCACCCCGGAGAACGTAGATGCAATTAGGGCCCTCACGGGCTTGGTC
AGCAAGGAAGAGAGCCTGAAGAAGACCGACTCCACCTTAGGTATAGTCAGATCCTTCTCGGAGCTGATAGAACGTGCGGC
TTCCAACTACGGTAAGTAA

Upstream 100 bases:

>100_bases
CGCTCACCGCTCGCTCTGGGACGGCGTCCTCACACCCCGCGCCTCCTGGGAGGAGAAAGCTGAAGAGTTAGGAGTGTCTC
CCTCTAACGGAGGTCAGCCC

Downstream 100 bases:

>100_bases
TTTTTACCCGAGTTAGGCATTCCTAACGGGGTCTCGGATGTGCTACTCCATAGCCGTGGTGGGCCAGCCTAACGTCGGTA
AGTCTACTTTCATAAACGTC

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSVKVAVNGFGTIGKRVAEAVLKQDDMTLVGVTKTKPDYLAMIASRMGSLYVPEDRVEKFQKAGIEVQGTLKDLLEKVDL
VVDATPGGVGKEYKPLYEKFGVKAIFQGGEKHEVAGFSFSTLCNYEEAEGKQFARVVSCNTTGLLRLICALRNHFKVKSV
RATIIRRGADPAETKKGPINAIVPNPVTLPSHHGVDVRTVLPDLDVQTVAAVVPTTIMHSHVLNVRFEEPVTREDVLKVL
EEAPRILVIPSELSGVKDTAKIIELARDVGRKRYDLYELAIYEESVSVEGDELFLMQAVHQESIVTPENVDAIRALTGLV
SKEESLKKTDSTLGIVRSFSELIERAASNYGK

Sequences:

>Translated_352_residues
MSVKVAVNGFGTIGKRVAEAVLKQDDMTLVGVTKTKPDYLAMIASRMGSLYVPEDRVEKFQKAGIEVQGTLKDLLEKVDL
VVDATPGGVGKEYKPLYEKFGVKAIFQGGEKHEVAGFSFSTLCNYEEAEGKQFARVVSCNTTGLLRLICALRNHFKVKSV
RATIIRRGADPAETKKGPINAIVPNPVTLPSHHGVDVRTVLPDLDVQTVAAVVPTTIMHSHVLNVRFEEPVTREDVLKVL
EEAPRILVIPSELSGVKDTAKIIELARDVGRKRYDLYELAIYEESVSVEGDELFLMQAVHQESIVTPENVDAIRALTGLV
SKEESLKKTDSTLGIVRSFSELIERAASNYGK
>Mature_351_residues
SVKVAVNGFGTIGKRVAEAVLKQDDMTLVGVTKTKPDYLAMIASRMGSLYVPEDRVEKFQKAGIEVQGTLKDLLEKVDLV
VDATPGGVGKEYKPLYEKFGVKAIFQGGEKHEVAGFSFSTLCNYEEAEGKQFARVVSCNTTGLLRLICALRNHFKVKSVR
ATIIRRGADPAETKKGPINAIVPNPVTLPSHHGVDVRTVLPDLDVQTVAAVVPTTIMHSHVLNVRFEEPVTREDVLKVLE
EAPRILVIPSELSGVKDTAKIIELARDVGRKRYDLYELAIYEESVSVEGDELFLMQAVHQESIVTPENVDAIRALTGLVS
KEESLKKTDSTLGIVRSFSELIERAASNYGK

Specific function: Unknown

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006436
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]

EC number: =1.2.1.59 [H]

Molecular weight: Translated: 38618; Mature: 38487

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00071 GAPDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKVAVNGFGTIGKRVAEAVLKQDDMTLVGVTKTKPDYLAMIASRMGSLYVPEDRVEKF
CEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHH
QKAGIEVQGTLKDLLEKVDLVVDATPGGVGKEYKPLYEKFGVKAIFQGGEKHEVAGFSFS
HHCCCEEEHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCEECCCCHH
TLCNYEEAEGKQFARVVSCNTTGLLRLICALRNHFKVKSVRATIIRRGADPAETKKGPIN
HHCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCC
AIVPNPVTLPSHHGVDVRTVLPDLDVQTVAAVVPTTIMHSHVLNVRFEEPVTREDVLKVL
EECCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
EEAPRILVIPSELSGVKDTAKIIELARDVGRKRYDLYELAIYEESVSVEGDELFLMQAVH
HHCCCEEEECCHHCCCHHHHHHHHHHHHHCHHHHHHHHEEEECCCCCCCCCHHHHHHHHH
QESIVTPENVDAIRALTGLVSKEESLKKTDSTLGIVRSFSELIERAASNYGK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVKVAVNGFGTIGKRVAEAVLKQDDMTLVGVTKTKPDYLAMIASRMGSLYVPEDRVEKF
EEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHH
QKAGIEVQGTLKDLLEKVDLVVDATPGGVGKEYKPLYEKFGVKAIFQGGEKHEVAGFSFS
HHCCCEEEHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCEECCCCHH
TLCNYEEAEGKQFARVVSCNTTGLLRLICALRNHFKVKSVRATIIRRGADPAETKKGPIN
HHCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCC
AIVPNPVTLPSHHGVDVRTVLPDLDVQTVAAVVPTTIMHSHVLNVRFEEPVTREDVLKVL
EECCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
EEAPRILVIPSELSGVKDTAKIIELARDVGRKRYDLYELAIYEESVSVEGDELFLMQAVH
HHCCCEEEECCHHCCCHHHHHHHHHHHHHCHHHHHHHHEEEECCCCCCCCCHHHHHHHHH
QESIVTPENVDAIRALTGLVSKEESLKKTDSTLGIVRSFSELIERAASNYGK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA