Click here to switch to the map view.

The map label for this gene is 156937782

Identifier: 156937782

GI number: 156937782

Start: 883799

End: 884656

Strand: Direct

Name: 156937782

Synonym: Igni_0992

Alternate gene names: NA

Gene position: 883799-884656 (Clockwise)

Preceding gene: 156937778

Following gene: 156937790

Centisome position: 68.11

GC content: 59.32

Gene sequence:

>858_bases
ATGCTCGTAAGGCCCCCTGCCGTCGCTGGGACCTTCTACCCGGCCGACGCCGAGGAGCTGATTAGACTGATAGAGTGGAG
CTTCACCCACCCCCTGGGACCCGGAGAGGTTCCAGAAGTCAGCCCCGTGAGGAGGAAGGCTAGCGTCGGTTACATGGTGC
CCCACGCGGGCTACATCTACTCCGGCCCCGTAGCCGCTTGGAGCTACTACCACTTGGCCCAAGAGGGGGCGCCCGAGACG
GTAGTGATAATTGGCCCCAACCACACCGGCTTGGGACCGGCCGTATCGGTAATGCCCCCGAGCATTTGGGAGACCCCGCT
GGGGGGCGTGAAGACGGACGATGAGGCCATAAGCGAGCTCCTAAAAGTGAGTAACGTGGTCGAGGAGGACTACAGCGCCC
ACGCCTACGAGCACAGCTTGGAGGTGCAACTCCCGTTCCTACAGTACCTCTTCGGCGACTCCTTCAGGATAGTGCCGATA
GTTATGAAGGTCCAGACCCCTTCGGTGGCGAGGCTGTTAATGCAATCCATAAAGGAAGCCATGGAGAACTTAGGGAGGGA
CTACGTAGTCCTCTCCTCCTCAGACTTGAACCACTACGAGCCCCACGACATTACCGTAGAGAAAGATATGCTGGCGCTCG
AGAAGATAGTGAACTTAGACCCGGAGGGCCTTCAAGAGGTCTTGGTGAAGTACGACATAAGCATGTGCGGCCCCGGCCCG
GTTATGGTCAACATGTACTTGGACAAGGAGTACGGCGCGGAGAGGGCGATCTTGCTCAAGCACGCCACGTCCGGGGACAC
TTCCGGCGACAAGAGCGCGGTAGTAGGGTACGCGGCGGTCAAGTTCCCCTTGCCTTAA

Upstream 100 bases:

>100_bases
AGACCTTCAGCAAGGGTGGACCCCTCGCGAGAAGGGGGCGGCGCTTAATGGGGCTTCAACAAAATAACTTCGCCTCCGCG
CCCCTCATGGGATGGAAAAA

Downstream 100 bases:

>100_bases
GGGCCTCCGCGGTCAGCCTCAAACCCTCTTCCAAGCTAACCCTAGGCCTCCACCCGAAGGCCGCCAGCTTCGTGACGTCT
GCAACGCTAACCCTCACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLVRPPAVAGTFYPADAEELIRLIEWSFTHPLGPGEVPEVSPVRRKASVGYMVPHAGYIYSGPVAAWSYYHLAQEGAPET
VVIIGPNHTGLGPAVSVMPPSIWETPLGGVKTDDEAISELLKVSNVVEEDYSAHAYEHSLEVQLPFLQYLFGDSFRIVPI
VMKVQTPSVARLLMQSIKEAMENLGRDYVVLSSSDLNHYEPHDITVEKDMLALEKIVNLDPEGLQEVLVKYDISMCGPGP
VMVNMYLDKEYGAERAILLKHATSGDTSGDKSAVVGYAAVKFPLP

Sequences:

>Translated_285_residues
MLVRPPAVAGTFYPADAEELIRLIEWSFTHPLGPGEVPEVSPVRRKASVGYMVPHAGYIYSGPVAAWSYYHLAQEGAPET
VVIIGPNHTGLGPAVSVMPPSIWETPLGGVKTDDEAISELLKVSNVVEEDYSAHAYEHSLEVQLPFLQYLFGDSFRIVPI
VMKVQTPSVARLLMQSIKEAMENLGRDYVVLSSSDLNHYEPHDITVEKDMLALEKIVNLDPEGLQEVLVKYDISMCGPGP
VMVNMYLDKEYGAERAILLKHATSGDTSGDKSAVVGYAAVKFPLP
>Mature_285_residues
MLVRPPAVAGTFYPADAEELIRLIEWSFTHPLGPGEVPEVSPVRRKASVGYMVPHAGYIYSGPVAAWSYYHLAQEGAPET
VVIIGPNHTGLGPAVSVMPPSIWETPLGGVKTDDEAISELLKVSNVVEEDYSAHAYEHSLEVQLPFLQYLFGDSFRIVPI
VMKVQTPSVARLLMQSIKEAMENLGRDYVVLSSSDLNHYEPHDITVEKDMLALEKIVNLDPEGLQEVLVKYDISMCGPGP
VMVNMYLDKEYGAERAILLKHATSGDTSGDKSAVVGYAAVKFPLP

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family

Homologues:

Organism=Homo sapiens, GI7705720, Length=300, Percent_Identity=24, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25146594, Length=258, Percent_Identity=25.968992248062, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI32566861, Length=258, Percent_Identity=25.968992248062, Blast_Score=82, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6322467, Length=213, Percent_Identity=26.2910798122066, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21357419, Length=307, Percent_Identity=27.6872964169381, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y992_IGNH4 (A8AB69)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435578.1
- ProteinModelPortal:   A8AB69
- SMR:   A8AB69
- STRING:   A8AB69
- GeneID:   5563068
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0992
- eggNOG:   arNOG05614
- HOGENOM:   HBG575564
- OMA:   GPNHTGY
- BioCyc:   IHOS453591:IGNI_0992-MONOMER
- HAMAP:   MF_00055
- InterPro:   IPR020619
- InterPro:   IPR002737
- PANTHER:   PTHR11060

Pfam domain/function: PF01875 Memo

EC number: NA

Molecular weight: Translated: 31194; Mature: 31194

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRPPAVAGTFYPADAEELIRLIEWSFTHPLGPGEVPEVSPVRRKASVGYMVPHAGYIY
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEECCCCCEEE
SGPVAAWSYYHLAQEGAPETVVIIGPNHTGLGPAVSVMPPSIWETPLGGVKTDDEAISEL
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCHHHCCCCCCCCCCHHHHHHH
LKVSNVVEEDYSAHAYEHSLEVQLPFLQYLFGDSFRIVPIVMKVQTPSVARLLMQSIKEA
HHHHHHHHHHHHHHHECCEEEEEEHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHH
MENLGRDYVVLSSSDLNHYEPHDITVEKDMLALEKIVNLDPEGLQEVLVKYDISMCGPGP
HHHCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
VMVNMYLDKEYGAERAILLKHATSGDTSGDKSAVVGYAAVKFPLP
EEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MLVRPPAVAGTFYPADAEELIRLIEWSFTHPLGPGEVPEVSPVRRKASVGYMVPHAGYIY
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEECCCCCEEE
SGPVAAWSYYHLAQEGAPETVVIIGPNHTGLGPAVSVMPPSIWETPLGGVKTDDEAISEL
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCHHHCCCCCCCCCCHHHHHHH
LKVSNVVEEDYSAHAYEHSLEVQLPFLQYLFGDSFRIVPIVMKVQTPSVARLLMQSIKEA
HHHHHHHHHHHHHHHECCEEEEEEHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHH
MENLGRDYVVLSSSDLNHYEPHDITVEKDMLALEKIVNLDPEGLQEVLVKYDISMCGPGP
HHHCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
VMVNMYLDKEYGAERAILLKHATSGDTSGDKSAVVGYAAVKFPLP
EEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA