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The map label for this gene is 156937754

Identifier: 156937754

GI number: 156937754

Start: 856364

End: 857716

Strand: Direct

Name: 156937754

Synonym: Igni_0963

Alternate gene names: NA

Gene position: 856364-857716 (Clockwise)

Preceding gene: 156937753

Following gene: 156937755

Centisome position: 66.0

GC content: 56.84

Gene sequence:

>1353_bases
TTGGTAGAGATCAGGGAAGTGAAGGAGCTGCCGAAGCGCGAGGAAGTTAGGGTGGGATTCCACACCCACATAAAGGGCCT
CGGACTCGACGAAAAAGGGAAGGCCAAGAAGGTGGCCGACGGCCTCGTAGGCCAAGAGGAGGCCAGGGAGGCCCTCGGAG
TGGTCGCACAGATGGTAAAAGAGGGTAAGATGGCGGGCAAGGGAGTATTAATAGTTGGCCCTCCGGGGACGGGCAAGACT
GCGCTCGCGGTCGGCCTGGCCAAGGAGTTGGGCGAAGACACTCCCTTCGTAGCTATGGGCGGTTCCGAAATAATGGGGAG
CCAGAGGAAGGGAGAACTGCTCATGCAAGCGATGAGGAGGTCTATAGGCGTCAGGGTAAAGGAGAAGAGGACCGTTTACG
AGGGCGTAGTAAGGGACATAAAGTACCGCGTCAGCCGCCACCCCTTCAACCCCTACATCAAGGTGCCTAGAGAAGCAGTA
ATCACGCTCGAGACCACCGACGACAGGGTAACCCTAACCGTCGACGAGGACATAGCCGTCCAGTTGAGGCAACTCGGAGT
GCGGAAGGGCGACATAATAGCCATAGACGCGGAGACCGGTAGGGTCTACAAGCTCGGCAGGGCGAGGGAGGAGAGCGACG
TCGGCGGCATAAAGCTCGTCAGGGAAGTGAAGGTGCCGGAGGGACCGGTCAAAAAGGAGAAGGAAATAGTGTATACTCTC
ACCTTACACGACTTGGACACCTACTTCGCCGCCCAGCAAGCGCCGATCAGCTTGTTGGCGGGCCTGGGCCCGGAGAGCGT
CACGGACGAGGTGAGGAAACAAGTCGACAAGATGGTCTCGGAGTGGGTGAAGCAAGGGAGGGCGGAGCTCGTTCCGGGCG
TCTTGTTCATAGACGACGCTCACTTGCTTGACCTAGAGACCTTCAGCTTCTTGTCAAGGGCTATGGAAAAGGAACTCGCG
CCGATAATCGTTCTAGCCACCAACAGAGGGAAGGCGAAGATAAGGGGCACGGACGAGGAAGCTCCCCACGGCATACCCCT
CGACATGCTGGACAGGTTACTAATAATTAGGACTAGACCGTACACCAGGTCTGAGATTGAAGAGATATTGAAGATCAGGG
CAGAAGAGGAAGGGGTCAAGCTTTCCAAAGAGGCTCTAGAGAAGCTTGCCGAAATGGGCGAGGCGAGGAGCTTGCGCTAT
GCGATAAACTTGTTGCAGCCAGCTTACACCATAGCTAAGATGAACGGAAGGGACGTGGTGGCGCCGGAGGACGTCGAGGA
GGCCACGCGGAAGTTCGTCGACGTCAGAGAGAGCGTTAAGTACGTGGAGCAGTTCAAGGATAAGTTCCTCTAG

Upstream 100 bases:

>100_bases
ATCCAGTAACCTTGAGCATTATAGTATTGATAGCAAGCATCTTGAAGAAGCGATAGCCCACACTTTTATAGAACCGTTTC
TTGCCACACCGGGGAACTCC

Downstream 100 bases:

>100_bases
CACGGTTTTACCCTCCAAACCCTTCAAATATCCCCTCTCCTACGCGCCCCGGGGGCGCTCATGGGAGCACGAAAGAAGGA
AGCGCCGCGTAGAGGCTCTG

Product: TBP-interacting protein TIP49

Products: NA

Alternate protein names: TIP49 Domain Protein; TIP49-Like Protein; Tbp-Interacting Protein Tip; TIP49 Domain-Containing Protein; DNA Helicase; TBP-Interacting Proten; TIP49 C-Terminal Domain Family Protein; DNA Helicase TIP; TIP49-Like

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MVEIREVKELPKREEVRVGFHTHIKGLGLDEKGKAKKVADGLVGQEEAREALGVVAQMVKEGKMAGKGVLIVGPPGTGKT
ALAVGLAKELGEDTPFVAMGGSEIMGSQRKGELLMQAMRRSIGVRVKEKRTVYEGVVRDIKYRVSRHPFNPYIKVPREAV
ITLETTDDRVTLTVDEDIAVQLRQLGVRKGDIIAIDAETGRVYKLGRAREESDVGGIKLVREVKVPEGPVKKEKEIVYTL
TLHDLDTYFAAQQAPISLLAGLGPESVTDEVRKQVDKMVSEWVKQGRAELVPGVLFIDDAHLLDLETFSFLSRAMEKELA
PIIVLATNRGKAKIRGTDEEAPHGIPLDMLDRLLIIRTRPYTRSEIEEILKIRAEEEGVKLSKEALEKLAEMGEARSLRY
AINLLQPAYTIAKMNGRDVVAPEDVEEATRKFVDVRESVKYVEQFKDKFL

Sequences:

>Translated_450_residues
MVEIREVKELPKREEVRVGFHTHIKGLGLDEKGKAKKVADGLVGQEEAREALGVVAQMVKEGKMAGKGVLIVGPPGTGKT
ALAVGLAKELGEDTPFVAMGGSEIMGSQRKGELLMQAMRRSIGVRVKEKRTVYEGVVRDIKYRVSRHPFNPYIKVPREAV
ITLETTDDRVTLTVDEDIAVQLRQLGVRKGDIIAIDAETGRVYKLGRAREESDVGGIKLVREVKVPEGPVKKEKEIVYTL
TLHDLDTYFAAQQAPISLLAGLGPESVTDEVRKQVDKMVSEWVKQGRAELVPGVLFIDDAHLLDLETFSFLSRAMEKELA
PIIVLATNRGKAKIRGTDEEAPHGIPLDMLDRLLIIRTRPYTRSEIEEILKIRAEEEGVKLSKEALEKLAEMGEARSLRY
AINLLQPAYTIAKMNGRDVVAPEDVEEATRKFVDVRESVKYVEQFKDKFL
>Mature_450_residues
MVEIREVKELPKREEVRVGFHTHIKGLGLDEKGKAKKVADGLVGQEEAREALGVVAQMVKEGKMAGKGVLIVGPPGTGKT
ALAVGLAKELGEDTPFVAMGGSEIMGSQRKGELLMQAMRRSIGVRVKEKRTVYEGVVRDIKYRVSRHPFNPYIKVPREAV
ITLETTDDRVTLTVDEDIAVQLRQLGVRKGDIIAIDAETGRVYKLGRAREESDVGGIKLVREVKVPEGPVKKEKEIVYTL
TLHDLDTYFAAQQAPISLLAGLGPESVTDEVRKQVDKMVSEWVKQGRAELVPGVLFIDDAHLLDLETFSFLSRAMEKELA
PIIVLATNRGKAKIRGTDEEAPHGIPLDMLDRLLIIRTRPYTRSEIEEILKIRAEEEGVKLSKEALEKLAEMGEARSLRY
AINLLQPAYTIAKMNGRDVVAPEDVEEATRKFVDVRESVKYVEQFKDKFL

Specific function: Unknown

COG id: COG1224

COG function: function code K; DNA helicase TIP49, TBP-interacting protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4506753, Length=457, Percent_Identity=44.6389496717724, Blast_Score=394, Evalue=1e-110,
Organism=Homo sapiens, GI5730023, Length=453, Percent_Identity=42.8256070640177, Blast_Score=365, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI17542510, Length=449, Percent_Identity=42.7616926503341, Blast_Score=346, Evalue=2e-95,
Organism=Caenorhabditis elegans, GI17558290, Length=453, Percent_Identity=38.8520971302428, Blast_Score=296, Evalue=1e-80,
Organism=Saccharomyces cerevisiae, GI6325021, Length=437, Percent_Identity=43.0205949656751, Blast_Score=353, Evalue=3e-98,
Organism=Saccharomyces cerevisiae, GI6320396, Length=457, Percent_Identity=41.7943107221007, Blast_Score=347, Evalue=3e-96,
Organism=Drosophila melanogaster, GI17737635, Length=453, Percent_Identity=43.046357615894, Blast_Score=362, Evalue=1e-100,
Organism=Drosophila melanogaster, GI21358125, Length=457, Percent_Identity=43.1072210065646, Blast_Score=357, Evalue=9e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50096; Mature: 50096

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIREVKELPKREEVRVGFHTHIKGLGLDEKGKAKKVADGLVGQEEAREALGVVAQMVK
CCCHHHHHCCCCCHHEEECHHHHEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
EGKMAGKGVLIVGPPGTGKTALAVGLAKELGEDTPFVAMGGSEIMGSQRKGELLMQAMRR
HCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHCCCHHHHHHHHHHHH
SIGVRVKEKRTVYEGVVRDIKYRVSRHPFNPYIKVPREAVITLETTDDRVTLTVDEDIAV
HHCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEEECCCEEEEEECCHHHH
QLRQLGVRKGDIIAIDAETGRVYKLGRAREESDVGGIKLVREVKVPEGPVKKEKEIVYTL
HHHHCCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHEEHEEECCCCCCCCCCCEEEEEE
TLHDLDTYFAAQQAPISLLAGLGPESVTDEVRKQVDKMVSEWVKQGRAELVPGVLFIDDA
EEEHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEECCC
HLLDLETFSFLSRAMEKELAPIIVLATNRGKAKIRGTDEEAPHGIPLDMLDRLLIIRTRP
CEECHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHEEECCC
YTRSEIEEILKIRAEEEGVKLSKEALEKLAEMGEARSLRYAINLLQPAYTIAKMNGRDVV
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCC
APEDVEEATRKFVDVRESVKYVEQFKDKFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVEIREVKELPKREEVRVGFHTHIKGLGLDEKGKAKKVADGLVGQEEAREALGVVAQMVK
CCCHHHHHCCCCCHHEEECHHHHEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
EGKMAGKGVLIVGPPGTGKTALAVGLAKELGEDTPFVAMGGSEIMGSQRKGELLMQAMRR
HCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHCCCHHHHHHHHHHHH
SIGVRVKEKRTVYEGVVRDIKYRVSRHPFNPYIKVPREAVITLETTDDRVTLTVDEDIAV
HHCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEEECCCEEEEEECCHHHH
QLRQLGVRKGDIIAIDAETGRVYKLGRAREESDVGGIKLVREVKVPEGPVKKEKEIVYTL
HHHHCCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHEEHEEECCCCCCCCCCCEEEEEE
TLHDLDTYFAAQQAPISLLAGLGPESVTDEVRKQVDKMVSEWVKQGRAELVPGVLFIDDA
EEEHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEECCC
HLLDLETFSFLSRAMEKELAPIIVLATNRGKAKIRGTDEEAPHGIPLDMLDRLLIIRTRP
CEECHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHEEECCC
YTRSEIEEILKIRAEEEGVKLSKEALEKLAEMGEARSLRYAINLLQPAYTIAKMNGRDVV
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCC
APEDVEEATRKFVDVRESVKYVEQFKDKFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA