Click here to switch to the map view.

The map label for this gene is 156937744

Identifier: 156937744

GI number: 156937744

Start: 844869

End: 845273

Strand: Direct

Name: 156937744

Synonym: Igni_0953

Alternate gene names: NA

Gene position: 844869-845273 (Clockwise)

Preceding gene: 156937743

Following gene: 156937748

Centisome position: 65.11

GC content: 57.28

Gene sequence:

>405_bases
TTGGACAAGATTAAAGACTTGAAGGAAGGCAAGAGCGTAACCATAAGGGGTCGCGTGCTAGAGGTAAGCGAGAAAAGGGT
CGTTAACACGAAGTACGGACCGGCAGAGCTCAGCGAGGCGGTCGTGGGCGACGAAACCGGAAGGGTGAGGGTAACCCTCT
GGAGGGACAAGGCTGGATCTCTGGAAGTGGGCGACGTGGTCGAGATAAGGGACGGGTGGACCACCTCATACAAGGGAGAG
GTTCAAGTAAACGTGAACAGGAGGACCGAGATCGTCAAGCTGGACGACTCGGAGGCGCCAAGCCCGGAGGAGATACCGGA
GGAGAGGCCTAAGAGCACGGCACGCGCAGGACCTTCACGTTCCTCTTTCTCACGAAGACGAGGAAGCAACCGTCCTTCCC
CTTAA

Upstream 100 bases:

>100_bases
ACTTGGCTCTGGGCTTGGCTGCCACGGCCGTGGCCGCTGCCCTAGGGCGGCTCTTGATATAAAAGGGGCGAGGCGGACTA
GACCTCGTGGGCGCTCGACT

Downstream 100 bases:

>100_bases
CTTTCAACCTCTTTCCCTTCCGTTCCACTACCTCAAACGATTCAACGAGTTCCTTCCCCTTTTCTGTCAACTCGTAAGTG
TTTTCCTTCTTTTTAATGTA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDKIKDLKEGKSVTIRGRVLEVSEKRVVNTKYGPAELSEAVVGDETGRVRVTLWRDKAGSLEVGDVVEIRDGWTTSYKGE
VQVNVNRRTEIVKLDDSEAPSPEEIPEERPKSTARAGPSRSSFSRRRGSNRPSP

Sequences:

>Translated_134_residues
MDKIKDLKEGKSVTIRGRVLEVSEKRVVNTKYGPAELSEAVVGDETGRVRVTLWRDKAGSLEVGDVVEIRDGWTTSYKGE
VQVNVNRRTEIVKLDDSEAPSPEEIPEERPKSTARAGPSRSSFSRRRGSNRPSP
>Mature_134_residues
MDKIKDLKEGKSVTIRGRVLEVSEKRVVNTKYGPAELSEAVVGDETGRVRVTLWRDKAGSLEVGDVVEIRDGWTTSYKGE
VQVNVNRRTEIVKLDDSEAPSPEEIPEERPKSTARAGPSRSSFSRRRGSNRPSP

Specific function: Unknown

COG id: COG1599

COG function: function code L; Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14908; Mature: 14908

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIKDLKEGKSVTIRGRVLEVSEKRVVNTKYGPAELSEAVVGDETGRVRVTLWRDKAGS
CCCCCCHHCCCEEEEEEEEEEECCCEEECCCCCHHHHHHHHCCCCCCEEEEEEEECCCCC
LEVGDVVEIRDGWTTSYKGEVQVNVNRRTEIVKLDDSEAPSPEEIPEERPKSTARAGPSR
EECCCEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCC
SSFSRRRGSNRPSP
CHHHHHCCCCCCCC
>Mature Secondary Structure
MDKIKDLKEGKSVTIRGRVLEVSEKRVVNTKYGPAELSEAVVGDETGRVRVTLWRDKAGS
CCCCCCHHCCCEEEEEEEEEEECCCEEECCCCCHHHHHHHHCCCCCCEEEEEEEECCCCC
LEVGDVVEIRDGWTTSYKGEVQVNVNRRTEIVKLDDSEAPSPEEIPEERPKSTARAGPSR
EECCCEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCC
SSFSRRRGSNRPSP
CHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA