BacMap

Definition	Ignicoccus hospitalis KIN4/I chromosome, complete genome.
Accession	NC_009776
Length	1,297,538

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The map label for this gene is hflB [C]

Identifier: 156937725

GI number: 156937725

Start: 827424

End: 828974

Strand: Direct

Name: hflB [C]

Synonym: Igni_0934

Alternate gene names: 156937725

Gene position: 827424-828974 (Clockwise)

Preceding gene: 156937722

Following gene: 156937726

Centisome position: 63.77

GC content: 55.0

Gene sequence:

>1551_bases
ATGAAACCCTTCGTTAATAAACTCCCGGATTGGGGGTCACCCGGTCGAGAGGGAGTGGGCGGTACCAAGAAGTTGACTAG
GGACAACCAGCACAAGTCAGCGAAGGTACTAAAGAACGAGATGCTTGGGACCAAGGTTGCCTACGAAGTCTCGAAGGGCT
TCAAGCCGGACTTCTCGGACAATTTGCTGCTGTCCTCAAACTTGTACTCGAAGATTGAGGAGCTCGTGTTGGACGAAGTC
ATAGGGGGGATCAAACTGAAGGAGCCCACCCCCAACATCTACGTCAAGTTCAAAAGCTTCGTCAACGCGAGCTCGACGGA
CGTATTCGCCTCCTTCGTGAACTACTACCTACACTTGCTCGCGTACAAGGCGGATGCGAACGTAGTCTTGGTGGCTTTCG
ACGAGCTCAAGAATAAGAACAGAATAATAGCAAAGAGGTTCGTCGCGTTGGCTCAGAAGCCGCGGGGGCCGGAGGGGGAA
CGCTCCGAAGAGGACGACACGGCCATACTGATAGGGTTACTGTTCTCGGACAGCCGCGCTAAGAGGTACAACCACAAGGC
GTTGATTAGGAAGACGAAGAACGCCGCTCAAGGCTTCCTACAGAGGTACTCCCGGGAGCTGGGCCTCCCGAACGTAAAGC
TTGCCGGCCCGACCCTCTTCGTCCACGTGGCCGCGGAGTTCCCCGAGAACGAAATAAAGATAGACGTGAGGGACGGGCAC
GAGAGCATAAAGATAACCATACCCTTGAGGGTTCCGGAGTGGAGCTTGGACGACTTCCCGGAGGAGTTGGGCGAAGAACT
GAGAACCTTAGTTATAGACCCAATTACCAATAAGATGGCGTTTGCTCCGAAGGGGATGTTGCTCGTGGGGCCTCCCGGAG
TGGGCAAGACCATCTTGGTCGAGGCGGTGGCGGGGGGGCTGGGGAGGAAGTTGTTGGAGCTCGAGCCGGGGATGTATAGG
AGCATGTGGTACGGCCAGACCGAAAAGATCTTGAAAGAGATATTTAATGCTGTTAGCAAGAGAAAGGATGAGGTAGTGGT
CCTCATAGACGACGCGGAGTTCTTGATGGACCGCGGCTTGGCGGTCCACGAGGGCTACGTAAGCGAGATGAACGTATTTC
TGAAGCTATTACAGAACAGGGAAAGACCGCTAATAGCGATGACGACCAACCACCCCCAGCTGCTCGACCAAGCCCTGGTT
AGGCCGGGCAGAGTAGACTTGGCCGTGATAGTGGGGTACCCCGACAAGGAGTTCCGGAGGAAGATCGTAGAGCGGGCGGC
TAAGAGGTATGAGCTAAAGATGGACGAACACTTAATCGAGAAGGTGGTCAGAGTCACCCGGTGGTTCAGCAACGCGGAGA
TAGACTCGTTAATAAGGATGGCTGCGGCCAAGGGTAAGGGCAAGATAACTGAGGAGAGCGTGGAGTGGGCCAGAAGGAGG
TTCCACATAGACGAGGGGGAGAGGGAGAGGCTCCAAGAGTCGCTCCGCTGGTACGCGAACAAGCTACAAGGAATGGTAGT
AAGCTACGTCAAGAACCCTTGGGAGGTGTGA

Upstream 100 bases:

>100_bases
GAAGGGTCGCGACCTCCCACGCGCGCTTCTCTCTCTCTACGCTTAACCCCAAGGAGCGCAAGATTTCGAACAAATAGGGC
TCCCAGCGGAGACATAAATC

Downstream 100 bases:

>100_bases
GCTGAGTGGCAATAACGTGGGAGCCCGTCTGGGAACTCGTTACGGTCGAGCACGAGGGCATGAGGATAAGGGTCTTAAGG
GACAAGGAGACGGGCTTGCT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MKPFVNKLPDWGSPGREGVGGTKKLTRDNQHKSAKVLKNEMLGTKVAYEVSKGFKPDFSDNLLLSSNLYSKIEELVLDEV
IGGIKLKEPTPNIYVKFKSFVNASSTDVFASFVNYYLHLLAYKADANVVLVAFDELKNKNRIIAKRFVALAQKPRGPEGE
RSEEDDTAILIGLLFSDSRAKRYNHKALIRKTKNAAQGFLQRYSRELGLPNVKLAGPTLFVHVAAEFPENEIKIDVRDGH
ESIKITIPLRVPEWSLDDFPEELGEELRTLVIDPITNKMAFAPKGMLLVGPPGVGKTILVEAVAGGLGRKLLELEPGMYR
SMWYGQTEKILKEIFNAVSKRKDEVVVLIDDAEFLMDRGLAVHEGYVSEMNVFLKLLQNRERPLIAMTTNHPQLLDQALV
RPGRVDLAVIVGYPDKEFRRKIVERAAKRYELKMDEHLIEKVVRVTRWFSNAEIDSLIRMAAAKGKGKITEESVEWARRR
FHIDEGERERLQESLRWYANKLQGMVVSYVKNPWEV

Sequences:

>Translated_516_residues
MKPFVNKLPDWGSPGREGVGGTKKLTRDNQHKSAKVLKNEMLGTKVAYEVSKGFKPDFSDNLLLSSNLYSKIEELVLDEV
IGGIKLKEPTPNIYVKFKSFVNASSTDVFASFVNYYLHLLAYKADANVVLVAFDELKNKNRIIAKRFVALAQKPRGPEGE
RSEEDDTAILIGLLFSDSRAKRYNHKALIRKTKNAAQGFLQRYSRELGLPNVKLAGPTLFVHVAAEFPENEIKIDVRDGH
ESIKITIPLRVPEWSLDDFPEELGEELRTLVIDPITNKMAFAPKGMLLVGPPGVGKTILVEAVAGGLGRKLLELEPGMYR
SMWYGQTEKILKEIFNAVSKRKDEVVVLIDDAEFLMDRGLAVHEGYVSEMNVFLKLLQNRERPLIAMTTNHPQLLDQALV
RPGRVDLAVIVGYPDKEFRRKIVERAAKRYELKMDEHLIEKVVRVTRWFSNAEIDSLIRMAAAKGKGKITEESVEWARRR
FHIDEGERERLQESLRWYANKLQGMVVSYVKNPWEV
>Mature_516_residues
MKPFVNKLPDWGSPGREGVGGTKKLTRDNQHKSAKVLKNEMLGTKVAYEVSKGFKPDFSDNLLLSSNLYSKIEELVLDEV
IGGIKLKEPTPNIYVKFKSFVNASSTDVFASFVNYYLHLLAYKADANVVLVAFDELKNKNRIIAKRFVALAQKPRGPEGE
RSEEDDTAILIGLLFSDSRAKRYNHKALIRKTKNAAQGFLQRYSRELGLPNVKLAGPTLFVHVAAEFPENEIKIDVRDGH
ESIKITIPLRVPEWSLDDFPEELGEELRTLVIDPITNKMAFAPKGMLLVGPPGVGKTILVEAVAGGLGRKLLELEPGMYR
SMWYGQTEKILKEIFNAVSKRKDEVVVLIDDAEFLMDRGLAVHEGYVSEMNVFLKLLQNRERPLIAMTTNHPQLLDQALV
RPGRVDLAVIVGYPDKEFRRKIVERAAKRYELKMDEHLIEKVVRVTRWFSNAEIDSLIRMAAAKGKGKITEESVEWARRR
FHIDEGERERLQESLRWYANKLQGMVVSYVKNPWEV

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI45643123, Length=270, Percent_Identity=27.4074074074074, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI45643125, Length=270, Percent_Identity=27.7777777777778, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI31742536, Length=186, Percent_Identity=30.6451612903226, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI112789543, Length=186, Percent_Identity=30.6451612903226, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI31377644, Length=286, Percent_Identity=27.2727272727273, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI21327685, Length=236, Percent_Identity=30.5084745762712, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI7657689, Length=281, Percent_Identity=28.1138790035587, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI6005942, Length=240, Percent_Identity=25.8333333333333, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI195539395, Length=210, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI157671927, Length=276, Percent_Identity=29.3478260869565, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI300192933, Length=192, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI229577436, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI21361144, Length=228, Percent_Identity=27.6315789473684, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI24497618, Length=188, Percent_Identity=28.1914893617021, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI156564401, Length=230, Percent_Identity=24.7826086956522, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI310125282, Length=201, Percent_Identity=25.8706467661692, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI24430151, Length=207, Percent_Identity=27.0531400966184, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI153792536, Length=188, Percent_Identity=26.063829787234, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI310125280, Length=201, Percent_Identity=25.8706467661692, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI89064750, Length=185, Percent_Identity=27.5675675675676, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI24430155, Length=185, Percent_Identity=27.5675675675676, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI5729991, Length=185, Percent_Identity=27.5675675675676, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI4507173, Length=189, Percent_Identity=26.984126984127, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI4506209, Length=224, Percent_Identity=27.6785714285714, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI194018488, Length=183, Percent_Identity=28.9617486338798, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI11875211, Length=185, Percent_Identity=27.027027027027, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI40806170, Length=209, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI4505725, Length=181, Percent_Identity=27.6243093922652, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI24497435, Length=211, Percent_Identity=27.0142180094787, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI1789568, Length=218, Percent_Identity=29.8165137614679, Blast_Score=89, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17508053, Length=257, Percent_Identity=29.9610894941634, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71987372, Length=256, Percent_Identity=28.90625, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71987364, Length=256, Percent_Identity=28.90625, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17537217, Length=226, Percent_Identity=27.8761061946903, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17508701, Length=210, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17541224, Length=247, Percent_Identity=25.1012145748988, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17541226, Length=247, Percent_Identity=25.1012145748988, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17532375, Length=256, Percent_Identity=24.609375, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17531535, Length=222, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI25146157, Length=189, Percent_Identity=29.1005291005291, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562804, Length=282, Percent_Identity=27.3049645390071, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17560432, Length=207, Percent_Identity=28.5024154589372, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17554264, Length=204, Percent_Identity=27.9411764705882, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17554784, Length=215, Percent_Identity=26.046511627907, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17563250, Length=187, Percent_Identity=28.3422459893048, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI133901658, Length=209, Percent_Identity=24.4019138755981, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI133901662, Length=209, Percent_Identity=24.4019138755981, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17505546, Length=188, Percent_Identity=29.2553191489362, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17563248, Length=224, Percent_Identity=26.7857142857143, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994521, Length=190, Percent_Identity=27.3684210526316, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32563584, Length=187, Percent_Identity=31.0160427807487, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17508421, Length=187, Percent_Identity=31.0160427807487, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25144278, Length=206, Percent_Identity=26.2135922330097, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25144281, Length=206, Percent_Identity=26.2135922330097, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI133931034, Length=157, Percent_Identity=28.6624203821656, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI193206116, Length=157, Percent_Identity=28.6624203821656, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI193206114, Length=157, Percent_Identity=28.6624203821656, Blast_Score=65, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6320077, Length=215, Percent_Identity=29.3023255813954, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321465, Length=184, Percent_Identity=30.4347826086957, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6321709, Length=217, Percent_Identity=26.7281105990783, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6324833, Length=204, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6325281, Length=209, Percent_Identity=29.1866028708134, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323429, Length=214, Percent_Identity=27.1028037383178, Blast_Score=81, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6322994, Length=233, Percent_Identity=25.3218884120172, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6324000, Length=195, Percent_Identity=26.1538461538462, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320197, Length=209, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324691, Length=203, Percent_Identity=26.6009852216749, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323736, Length=194, Percent_Identity=27.319587628866, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320854, Length=194, Percent_Identity=26.8041237113402, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319554, Length=201, Percent_Identity=24.8756218905473, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6322704, Length=165, Percent_Identity=29.6969696969697, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320602, Length=193, Percent_Identity=25.3886010362694, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321390, Length=237, Percent_Identity=26.1603375527426, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322651, Length=193, Percent_Identity=25.9067357512953, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI20129423, Length=211, Percent_Identity=31.2796208530806, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI20129529, Length=211, Percent_Identity=31.2796208530806, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24581396, Length=199, Percent_Identity=31.1557788944724, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI45552965, Length=260, Percent_Identity=25.3846153846154, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24660075, Length=260, Percent_Identity=25.3846153846154, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI281365776, Length=260, Percent_Identity=25.3846153846154, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI19921202, Length=205, Percent_Identity=28.780487804878, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24658770, Length=246, Percent_Identity=28.4552845528455, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17137560, Length=215, Percent_Identity=26.046511627907, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161076488, Length=215, Percent_Identity=26.046511627907, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI161076486, Length=215, Percent_Identity=26.046511627907, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24652279, Length=186, Percent_Identity=25.8064516129032, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24640100, Length=215, Percent_Identity=27.4418604651163, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28574878, Length=188, Percent_Identity=27.6595744680851, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24665814, Length=188, Percent_Identity=27.6595744680851, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17738151, Length=210, Percent_Identity=29.0476190476191, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24656820, Length=223, Percent_Identity=26.0089686098655, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24656825, Length=220, Percent_Identity=26.3636363636364, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI281361487, Length=211, Percent_Identity=25.1184834123223, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24663015, Length=210, Percent_Identity=27.6190476190476, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24639391, Length=217, Percent_Identity=25.8064516129032, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649446, Length=207, Percent_Identity=28.5024154589372, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571849, Length=210, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571847, Length=210, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI18860063, Length=236, Percent_Identity=25.4237288135593, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI17137738, Length=224, Percent_Identity=27.2321428571429, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281363136, Length=187, Percent_Identity=29.9465240641711, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI78707192, Length=187, Percent_Identity=29.9465240641711, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24651451, Length=216, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639486, Length=202, Percent_Identity=27.2277227722772, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355121, Length=189, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 58632; Mature: 58632

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFVNKLPDWGSPGREGVGGTKKLTRDNQHKSAKVLKNEMLGTKVAYEVSKGFKPDFSD
CCCHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC
NLLLSSNLYSKIEELVLDEVIGGIKLKEPTPNIYVKFKSFVNASSTDVFASFVNYYLHLL
CEEECHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHH
AYKADANVVLVAFDELKNKNRIIAKRFVALAQKPRGPEGERSEEDDTAILIGLLFSDSRA
HEECCCCEEEEEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCHH
KRYNHKALIRKTKNAAQGFLQRYSRELGLPNVKLAGPTLFVHVAAEFPENEIKIDVRDGH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEECCCCCCEEEEEECCC
ESIKITIPLRVPEWSLDDFPEELGEELRTLVIDPITNKMAFAPKGMLLVGPPGVGKTILV
CEEEEEEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCEECCCCEEEECCCCCCHHHHH
EAVAGGLGRKLLELEPGMYRSMWYGQTEKILKEIFNAVSKRKDEVVVLIDDAEFLMDRGL
HHHHHHHCCHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCC
AVHEGYVSEMNVFLKLLQNRERPLIAMTTNHPQLLDQALVRPGRVDLAVIVGYPDKEFRR
EEECCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEECCCHHHHH
KIVERAAKRYELKMDEHLIEKVVRVTRWFSNAEIDSLIRMAAAKGKGKITEESVEWARRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
FHIDEGERERLQESLRWYANKLQGMVVSYVKNPWEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKPFVNKLPDWGSPGREGVGGTKKLTRDNQHKSAKVLKNEMLGTKVAYEVSKGFKPDFSD
CCCHHHCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC
NLLLSSNLYSKIEELVLDEVIGGIKLKEPTPNIYVKFKSFVNASSTDVFASFVNYYLHLL
CEEECHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHH
AYKADANVVLVAFDELKNKNRIIAKRFVALAQKPRGPEGERSEEDDTAILIGLLFSDSRA
HEECCCCEEEEEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCHH
KRYNHKALIRKTKNAAQGFLQRYSRELGLPNVKLAGPTLFVHVAAEFPENEIKIDVRDGH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEECCCCCCEEEEEECCC
ESIKITIPLRVPEWSLDDFPEELGEELRTLVIDPITNKMAFAPKGMLLVGPPGVGKTILV
CEEEEEEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCEECCCCEEEECCCCCCHHHHH
EAVAGGLGRKLLELEPGMYRSMWYGQTEKILKEIFNAVSKRKDEVVVLIDDAEFLMDRGL
HHHHHHHCCHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCC
AVHEGYVSEMNVFLKLLQNRERPLIAMTTNHPQLLDQALVRPGRVDLAVIVGYPDKEFRR
EEECCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEECCCHHHHH
KIVERAAKRYELKMDEHLIEKVVRVTRWFSNAEIDSLIRMAAAKGKGKITEESVEWARRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
FHIDEGERERLQESLRWYANKLQGMVVSYVKNPWEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]