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The map label for this gene is 156937710

Identifier: 156937710

GI number: 156937710

Start: 815479

End: 816108

Strand: Direct

Name: 156937710

Synonym: Igni_0919

Alternate gene names: NA

Gene position: 815479-816108 (Clockwise)

Preceding gene: 156937709

Following gene: 156937711

Centisome position: 62.85

GC content: 58.25

Gene sequence:

>630_bases
TTGAAGAAGCTTAAGGTCATACTGCTCGAGTCCCCCCTAGAGCTGGCGCCTCCCTCTTGGCCCTACGGGCCGCTGATAGA
CAAGAGGTACCACTACCACAAGCTCTCCGCCTTTACGAGGAAGTGGAAGAGGGGGAGGCCGGACATAGTCCACACGACGC
TGCTGGTCTTACTGGACTCGCTGTTAAACGCCAACGGCAGCTTGGAAGTGTACGTACATACCTTAGACGGCAAGGTTTAC
TACGTGAGCCCCGAGGAGAGGCTCCCCAAGCACTACGACGCCTTCAAGCAGATAATGGCCCAGCTCCTCCAGCGAGGCAA
GGTCCCTCCCGAGGGGGAGCCGCTCATGTGGCTCGCGTACGAGAGCCTCTCGGACTTCGTGAAGGAACACGGAAAAATCA
TCCTGCTGTGGGAAAAGGGAGAGCCGAGGAGGTTCAAGGAAATAGCCTCAGAAGCCTTGGAGACCGGGGCCCCCGTGGGC
ATAGGCGCCTTCCCGAGGGGAGATTTCGAGAAGAGTACCTTGAGGAAGTCCGCTAAGAGGTACTCCGTGTTCGGCGGGAG
GCCGTTGAAGGCTTGGACCGTAGCCTATAAGTTGGTGTGCGCAGCCGAAGAGCTCCTAGGGCTGGAATAA

Upstream 100 bases:

>100_bases
GCAGTTGACTTGGTGTCTAAGGAGGACGGCAAGCCCAGCTACCGGCTCTACGCTAAGGAGCCCGAAAGGCTTTACGACGT
CTTGCGGAGGCTAGGCGGGG

Downstream 100 bases:

>100_bases
TACCTCAAGCCCCTCCGATAGCTGGGGGTCCGAGCTTTGGGCGTGGCCTACTTGTTCGTCTACGGCACGCTCATGCGCGG
CTGCCCGCTTCACGACGCGC

Product: ribosome biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKKLKVILLESPLELAPPSWPYGPLIDKRYHYHKLSAFTRKWKRGRPDIVHTTLLVLLDSLLNANGSLEVYVHTLDGKVY
YVSPEERLPKHYDAFKQIMAQLLQRGKVPPEGEPLMWLAYESLSDFVKEHGKIILLWEKGEPRRFKEIASEALETGAPVG
IGAFPRGDFEKSTLRKSAKRYSVFGGRPLKAWTVAYKLVCAAEELLGLE

Sequences:

>Translated_209_residues
MKKLKVILLESPLELAPPSWPYGPLIDKRYHYHKLSAFTRKWKRGRPDIVHTTLLVLLDSLLNANGSLEVYVHTLDGKVY
YVSPEERLPKHYDAFKQIMAQLLQRGKVPPEGEPLMWLAYESLSDFVKEHGKIILLWEKGEPRRFKEIASEALETGAPVG
IGAFPRGDFEKSTLRKSAKRYSVFGGRPLKAWTVAYKLVCAAEELLGLE
>Mature_209_residues
MKKLKVILLESPLELAPPSWPYGPLIDKRYHYHKLSAFTRKWKRGRPDIVHTTLLVLLDSLLNANGSLEVYVHTLDGKVY
YVSPEERLPKHYDAFKQIMAQLLQRGKVPPEGEPLMWLAYESLSDFVKEHGKIILLWEKGEPRRFKEIASEALETGAPVG
IGAFPRGDFEKSTLRKSAKRYSVFGGRPLKAWTVAYKLVCAAEELLGLE

Specific function: Involved in ribosomal biogenesis. It seems to play a role a methylation reaction in pre-rRNA processing [H]

COG id: COG1756

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NEP1 family [H]

Homologues:

Organism=Homo sapiens, GI194328699, Length=211, Percent_Identity=29.3838862559242, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005304 [H]

Pfam domain/function: PF03587 EMG1 [H]

EC number: NA

Molecular weight: Translated: 23831; Mature: 23831

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKVILLESPLELAPPSWPYGPLIDKRYHYHKLSAFTRKWKRGRPDIVHTTLLVLLDS
CCCEEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLNANGSLEVYVHTLDGKVYYVSPEERLPKHYDAFKQIMAQLLQRGKVPPEGEPLMWLAY
HHCCCCCEEEEEEEECCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHH
ESLSDFVKEHGKIILLWEKGEPRRFKEIASEALETGAPVGIGAFPRGDFEKSTLRKSAKR
HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
YSVFGGRPLKAWTVAYKLVCAAEELLGLE
HHHCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLKVILLESPLELAPPSWPYGPLIDKRYHYHKLSAFTRKWKRGRPDIVHTTLLVLLDS
CCCEEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLNANGSLEVYVHTLDGKVYYVSPEERLPKHYDAFKQIMAQLLQRGKVPPEGEPLMWLAY
HHCCCCCEEEEEEEECCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHH
ESLSDFVKEHGKIILLWEKGEPRRFKEIASEALETGAPVGIGAFPRGDFEKSTLRKSAKR
HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
YSVFGGRPLKAWTVAYKLVCAAEELLGLE
HHHCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]