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The map label for this gene is tldD [C]

Identifier: 156937700

GI number: 156937700

Start: 807004

End: 808290

Strand: Direct

Name: tldD [C]

Synonym: Igni_0909

Alternate gene names: 156937700

Gene position: 807004-808290 (Clockwise)

Preceding gene: 156937699

Following gene: 156937701

Centisome position: 62.2

GC content: 64.18

Gene sequence:

>1287_bases
TTGGAACTGGGGTGGAAGAAGGGCGTATACGTGGAGGTAAACGTCCTCGGGGCCTCTAGGACCTCCGTGACGGCATCGGG
GGAAGAGCACAAGGTCGTTCAAGGCCACTCGTGGTTGGCCGGAGTGAGGGTAGAGGGGTCCGGCTTAGCTTACACCACTT
CGCCGGAGGGCTTGGTGGAGGCCTTCGAGAGGGCCTACAAGGCCTACAAGGCTTTGGGACCCTCCAAGCTCTACGAGCTG
GGCCCCTTGGTGGATAGGGTCAGCCAGAGGCTGGAGCGCCCCCCGTGGGACGTGGACCTCGAGACCAAGGTGAAGGACGT
CTTGGACGCGCTCAAGGAGGCCAAGGGGAAGGCAGTGGTTGCCTATAGGGAGGTTTACGGCTACAAGCTGTACGCCTCCT
CCGACGGGAGGGAGGTCCTCCAGAGGCTCTCCTACTCCCTCCACGCGGCCAACGTGACCCTGGCGGAGGGAGGGAACAGG
GGGAACGGCTACTGGAGCGTCGCCTCGAGGAAGGGCTACACTACTGACCCTCGGACGGCCGTGAGGGAGGCCGTTAGGAA
GGCGGAGCTGCAGCTGAGGGGCAAGGGGCTGGAGCCCGGGCTCTGGGAGGTCGCGCTGGAGCCCCCGGCGATAGGGGTTA
TGGTCCACGAGGCGCTGGGCCACATGTCGGAGGCGGACCACGTGGCCTCTGGCTCCCCGCTCAAGAAGGGGGAGACCGTC
GGGCCGGAGTTCTTGAACGTGAGCGACTCCCCGGGGCCCGAGGGGGAGTGGGGCTCCATATTCTACGACGACGAGGGCGT
GAAGCCTAAGAAAGTCGAAATAGTCAAGGAAGGGAAGGTCAACGGGTTCTTGACGGACCGCAAGCACGCGGCCCTCTTGG
GCCTCGAGCCCACAGGGAACGGGAGACAAGAGGACCCCTCCAAGCCCCCGATACCTAGGATGAGGGTAACTTACGTCGAG
CCGGGCGACTGGAGGAGGGACGAGGTGTTGGGAGAGCTTAAGAGAGGAGTCTTGATAGTAGACACCTCCGGGGGTAACGC
GGAGCTCGACGGAACGTTCTTCTTCATGAGCCAGGAGGCGTGGTACGTGGAGGGCGGGGAGCCCAAGTACCCGCTCAAGC
CCCTAGGGATAGCTGGGAACGTCCTCGAGATGTTAAAGGAAGTGAAGGCGGTGGGCAACGAGTTGGCCTTCAGGCCGGGC
ACTTGCGGGAAGTGGGGCCAGTCGGTCCCGGTCAGCGTAGGAGGCCCCCTTACCTTAACCGCCCTCCGCCTCTCCCCGCC
GGCGTGA

Upstream 100 bases:

>100_bases
ACCGAGGGTAAGCTGGTGGCGGTGAGGAGGGATGGAGGGGTGGAACTTACCTTCCAGCCTTCCAAGTGAGGGCGAGTCCC
TAGAGCTCGCCAAGAAGGTC

Downstream 100 bases:

>100_bases
AAGGGTGAGGGTCGCTTTCTTACCCCTAGGCTCTTACGAACAACACGGTCCCTTGCCCAAGGACTTAGATGCTAGGATAG
CCTCGGCGGTCGCGAGGAGG

Product: peptidase U62, modulator of DNA gyrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MELGWKKGVYVEVNVLGASRTSVTASGEEHKVVQGHSWLAGVRVEGSGLAYTTSPEGLVEAFERAYKAYKALGPSKLYEL
GPLVDRVSQRLERPPWDVDLETKVKDVLDALKEAKGKAVVAYREVYGYKLYASSDGREVLQRLSYSLHAANVTLAEGGNR
GNGYWSVASRKGYTTDPRTAVREAVRKAELQLRGKGLEPGLWEVALEPPAIGVMVHEALGHMSEADHVASGSPLKKGETV
GPEFLNVSDSPGPEGEWGSIFYDDEGVKPKKVEIVKEGKVNGFLTDRKHAALLGLEPTGNGRQEDPSKPPIPRMRVTYVE
PGDWRRDEVLGELKRGVLIVDTSGGNAELDGTFFFMSQEAWYVEGGEPKYPLKPLGIAGNVLEMLKEVKAVGNELAFRPG
TCGKWGQSVPVSVGGPLTLTALRLSPPA

Sequences:

>Translated_428_residues
MELGWKKGVYVEVNVLGASRTSVTASGEEHKVVQGHSWLAGVRVEGSGLAYTTSPEGLVEAFERAYKAYKALGPSKLYEL
GPLVDRVSQRLERPPWDVDLETKVKDVLDALKEAKGKAVVAYREVYGYKLYASSDGREVLQRLSYSLHAANVTLAEGGNR
GNGYWSVASRKGYTTDPRTAVREAVRKAELQLRGKGLEPGLWEVALEPPAIGVMVHEALGHMSEADHVASGSPLKKGETV
GPEFLNVSDSPGPEGEWGSIFYDDEGVKPKKVEIVKEGKVNGFLTDRKHAALLGLEPTGNGRQEDPSKPPIPRMRVTYVE
PGDWRRDEVLGELKRGVLIVDTSGGNAELDGTFFFMSQEAWYVEGGEPKYPLKPLGIAGNVLEMLKEVKAVGNELAFRPG
TCGKWGQSVPVSVGGPLTLTALRLSPPA
>Mature_428_residues
MELGWKKGVYVEVNVLGASRTSVTASGEEHKVVQGHSWLAGVRVEGSGLAYTTSPEGLVEAFERAYKAYKALGPSKLYEL
GPLVDRVSQRLERPPWDVDLETKVKDVLDALKEAKGKAVVAYREVYGYKLYASSDGREVLQRLSYSLHAANVTLAEGGNR
GNGYWSVASRKGYTTDPRTAVREAVRKAELQLRGKGLEPGLWEVALEPPAIGVMVHEALGHMSEADHVASGSPLKKGETV
GPEFLNVSDSPGPEGEWGSIFYDDEGVKPKKVEIVKEGKVNGFLTDRKHAALLGLEPTGNGRQEDPSKPPIPRMRVTYVE
PGDWRRDEVLGELKRGVLIVDTSGGNAELDGTFFFMSQEAWYVEGGEPKYPLKPLGIAGNVLEMLKEVKAVGNELAFRPG
TCGKWGQSVPVSVGGPLTLTALRLSPPA

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=241, Percent_Identity=34.4398340248963, Blast_Score=138, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 46407; Mature: 46407

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELGWKKGVYVEVNVLGASRTSVTASGEEHKVVQGHSWLAGVRVEGSGLAYTTSPEGLVE
CCCCCCCCEEEEEEEEECCCCEEECCCCCCEEEECCCEEEEEEECCCCEEEECCCHHHHH
AFERAYKAYKALGPSKLYELGPLVDRVSQRLERPPWDVDLETKVKDVLDALKEAKGKAVV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
AYREVYGYKLYASSDGREVLQRLSYSLHAANVTLAEGGNRGNGYWSVASRKGYTTDPRTA
EEEHHHCEEEEECCCHHHHHHHHHHHHEECEEEEECCCCCCCEEEEEECCCCCCCCHHHH
VREAVRKAELQLRGKGLEPGLWEVALEPPAIGVMVHEALGHMSEADHVASGSPLKKGETV
HHHHHHHHHHHEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC
GPEFLNVSDSPGPEGEWGSIFYDDEGVKPKKVEIVKEGKVNGFLTDRKHAALLGLEPTGN
CCCEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCC
GRQEDPSKPPIPRMRVTYVEPGDWRRDEVLGELKRGVLIVDTSGGNAELDGTFFFMSQEA
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCEECEEEEEEECCE
WYVEGGEPKYPLKPLGIAGNVLEMLKEVKAVGNELAFRPGTCGKWGQSVPVSVGGPLTLT
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEE
ALRLSPPA
EEEECCCC
>Mature Secondary Structure
MELGWKKGVYVEVNVLGASRTSVTASGEEHKVVQGHSWLAGVRVEGSGLAYTTSPEGLVE
CCCCCCCCEEEEEEEEECCCCEEECCCCCCEEEECCCEEEEEEECCCCEEEECCCHHHHH
AFERAYKAYKALGPSKLYELGPLVDRVSQRLERPPWDVDLETKVKDVLDALKEAKGKAVV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
AYREVYGYKLYASSDGREVLQRLSYSLHAANVTLAEGGNRGNGYWSVASRKGYTTDPRTA
EEEHHHCEEEEECCCHHHHHHHHHHHHEECEEEEECCCCCCCEEEEEECCCCCCCCHHHH
VREAVRKAELQLRGKGLEPGLWEVALEPPAIGVMVHEALGHMSEADHVASGSPLKKGETV
HHHHHHHHHHHEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC
GPEFLNVSDSPGPEGEWGSIFYDDEGVKPKKVEIVKEGKVNGFLTDRKHAALLGLEPTGN
CCCEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCC
GRQEDPSKPPIPRMRVTYVEPGDWRRDEVLGELKRGVLIVDTSGGNAELDGTFFFMSQEA
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCEECEEEEEEECCE
WYVEGGEPKYPLKPLGIAGNVLEMLKEVKAVGNELAFRPGTCGKWGQSVPVSVGGPLTLT
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEE
ALRLSPPA
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]