| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937690
Identifier: 156937690
GI number: 156937690
Start: 798697
End: 799800
Strand: Direct
Name: 156937690
Synonym: Igni_0899
Alternate gene names: NA
Gene position: 798697-799800 (Clockwise)
Preceding gene: 156937689
Following gene: 156937692
Centisome position: 61.55
GC content: 58.51
Gene sequence:
>1104_bases GTGGCGAAGGTAGTCATCTTGGGCGGCGGTGTCGCCGGCCTCACCGTGGCTCACGCGCTGGCCGAAAAGGGCGTCGAGAG CACCGTAGTCAGCTTGCACGACTACTACATCAGCGGCCCCAGCAGGCCGCTCATCTTGAGCGGCGAGCAGAGCGTCGACC GCATCACCAGGGGGTACAACTTCCTCCCCAAGGAAATCAAGGTGACCTACGGCAGGGTCGAGGAGGTCGACTTCGCCAAC CGCAAGGTCAAGCTGGCGAACAAGAGGGAGCTGGACTACGACTACTTGGTGGTTGCCCTCGGCCTGAGGTACGCTTACGA CGCCATTAAGATTGAGGACCACGTGTTCAACGTTTACGACTTGGGTAAGGTGTTTGACCTAAAGCACTTGGTGTGGAACA TAACTGAAGGCACCATAGTGGTCAACGCCCCCAAGCAGCCCTACCGCTGTGCCCCCGCACCCGGCGAGACCGTCATGACC ATAGACATGATATTGAGGCACAGGGGAGTTAGGGACAAGGTGAAGCTGATATTCGTGGACGGAAACGAGAAGCCCCAGCC TCCGGTGATAGCGGACGTGTGGCTCAAGCTCTTCGAGGAGGCCGGCATAGAATACTACCTCAACAAGCAGATAACTGAAG TAACCAAGGAAGGAGTGGTTCTGGACGACGGCACCCAGATAAAGGCCGACTACAAGGTCATACTGCCCCCCAACAAGCCC GTCTTGTTCGACAGCTGGCTGGAGGTCAGGGGTCCCAAGGACTTGAGATTGAAGGATTACGACGACGTCTTCGCTGTGGG CGACATAGCCAAGCTCCCCTTCCCCAAGAACGCCGAGATAGCCACCCAGAGCGCGCTCAACGCGGCGGCCAAGCTAATGG AAGAGCTGGGCGTCGGAGGGGGCAACTACGTGGACTACAAGTTCTCCGGCTGGGCCTACGCCGGCAACTTGAAGGGCGAG CTGAAGACTTTGAGCGTCCAGTTCAGCTTGGACTTCAGTGAGGGCAAGCCCAAGGGGAGCAAGGACCCGGAGCCCAAGGA GGAGTACACCAAGAGGAAGGACGCGTGGGAGCAAGCGATGCTCAAGAAGCTCTTCGGTTACTGA
Upstream 100 bases:
>100_bases ATTCCATTCAAATTCTTCATTTGACTAGTTGGTAAGCCATGGGGAGGTTTAACATTCTATCTTATAGTTACCCGCGCGAG CTTCCCTAACGGTGAAGTAA
Downstream 100 bases:
>100_bases ACTCACTTTTTCTTGAGTATTGCGATAAAGAAGCCCGGCTCCCCGTGCACGCTCGGGCTCACCTTAACTGGGGTCTTCCC CCAAGGGGTGTCCTTCTCGA
Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein Subunit; NAD(FAD)-Dependent Dehydrogenase; Oxidoreductase; Flavoprotein Reductase; NADH Dehydrogenase; Sulfide-Quinone Oxidoreductase; Flavoprotein Reductase Conjectural; Sulfide-Quinone Reductase; Sulfide Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Dehydrogenase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; Twin-Arginine Translocation Pathway Signal; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; Sulfide Dehydrogenase Flavoprtein Subunit; Dehydrogenase/Reductase; Sulfide Quinone Reductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Dehydrogenase Related Protein
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MAKVVILGGGVAGLTVAHALAEKGVESTVVSLHDYYISGPSRPLILSGEQSVDRITRGYNFLPKEIKVTYGRVEEVDFAN RKVKLANKRELDYDYLVVALGLRYAYDAIKIEDHVFNVYDLGKVFDLKHLVWNITEGTIVVNAPKQPYRCAPAPGETVMT IDMILRHRGVRDKVKLIFVDGNEKPQPPVIADVWLKLFEEAGIEYYLNKQITEVTKEGVVLDDGTQIKADYKVILPPNKP VLFDSWLEVRGPKDLRLKDYDDVFAVGDIAKLPFPKNAEIATQSALNAAAKLMEELGVGGGNYVDYKFSGWAYAGNLKGE LKTLSVQFSLDFSEGKPKGSKDPEPKEEYTKRKDAWEQAMLKKLFGY
Sequences:
>Translated_367_residues MAKVVILGGGVAGLTVAHALAEKGVESTVVSLHDYYISGPSRPLILSGEQSVDRITRGYNFLPKEIKVTYGRVEEVDFAN RKVKLANKRELDYDYLVVALGLRYAYDAIKIEDHVFNVYDLGKVFDLKHLVWNITEGTIVVNAPKQPYRCAPAPGETVMT IDMILRHRGVRDKVKLIFVDGNEKPQPPVIADVWLKLFEEAGIEYYLNKQITEVTKEGVVLDDGTQIKADYKVILPPNKP VLFDSWLEVRGPKDLRLKDYDDVFAVGDIAKLPFPKNAEIATQSALNAAAKLMEELGVGGGNYVDYKFSGWAYAGNLKGE LKTLSVQFSLDFSEGKPKGSKDPEPKEEYTKRKDAWEQAMLKKLFGY >Mature_366_residues AKVVILGGGVAGLTVAHALAEKGVESTVVSLHDYYISGPSRPLILSGEQSVDRITRGYNFLPKEIKVTYGRVEEVDFANR KVKLANKRELDYDYLVVALGLRYAYDAIKIEDHVFNVYDLGKVFDLKHLVWNITEGTIVVNAPKQPYRCAPAPGETVMTI DMILRHRGVRDKVKLIFVDGNEKPQPPVIADVWLKLFEEAGIEYYLNKQITEVTKEGVVLDDGTQIKADYKVILPPNKPV LFDSWLEVRGPKDLRLKDYDDVFAVGDIAKLPFPKNAEIATQSALNAAAKLMEELGVGGGNYVDYKFSGWAYAGNLKGEL KTLSVQFSLDFSEGKPKGSKDPEPKEEYTKRKDAWEQAMLKKLFGY
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=317, Percent_Identity=25.5520504731861, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI115534373, Length=300, Percent_Identity=24.3333333333333, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17539680, Length=126, Percent_Identity=30.1587301587302, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41053; Mature: 40921
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVVILGGGVAGLTVAHALAEKGVESTVVSLHDYYISGPSRPLILSGEQSVDRITRGYN CEEEEEECCCHHHHHHHHHHHHCCHHHHHEEEEEEEECCCCCCEEECCCHHHHHHHHCCC FLPKEIKVTYGRVEEVDFANRKVKLANKRELDYDYLVVALGLRYAYDAIKIEDHVFNVYD CCCCEEEEEECCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHEEEEECEEECHHH LGKVFDLKHLVWNITEGTIVVNAPKQPYRCAPAPGETVMTIDMILRHRGVRDKVKLIFVD CCHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHHCCCCCEEEEEEEC GNEKPQPPVIADVWLKLFEEAGIEYYLNKQITEVTKEGVVLDDGTQIKADYKVILPPNKP CCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHCCEEEECCCEEEECEEEEECCCCC VLFDSWLEVRGPKDLRLKDYDDVFAVGDIAKLPFPKNAEIATQSALNAAAKLMEELGVGG EEEECHHHCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC GNYVDYKFSGWAYAGNLKGELKTLSVQFSLDFSEGKPKGSKDPEPKEEYTKRKDAWEQAM CCEEEEEECCEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH LKKLFGY HHHHHCC >Mature Secondary Structure AKVVILGGGVAGLTVAHALAEKGVESTVVSLHDYYISGPSRPLILSGEQSVDRITRGYN EEEEEECCCHHHHHHHHHHHHCCHHHHHEEEEEEEECCCCCCEEECCCHHHHHHHHCCC FLPKEIKVTYGRVEEVDFANRKVKLANKRELDYDYLVVALGLRYAYDAIKIEDHVFNVYD CCCCEEEEEECCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHEEEEECEEECHHH LGKVFDLKHLVWNITEGTIVVNAPKQPYRCAPAPGETVMTIDMILRHRGVRDKVKLIFVD CCHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHHCCCCCEEEEEEEC GNEKPQPPVIADVWLKLFEEAGIEYYLNKQITEVTKEGVVLDDGTQIKADYKVILPPNKP CCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHCCEEEECCCEEEECEEEEECCCCC VLFDSWLEVRGPKDLRLKDYDDVFAVGDIAKLPFPKNAEIATQSALNAAAKLMEELGVGG EEEECHHHCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC GNYVDYKFSGWAYAGNLKGELKTLSVQFSLDFSEGKPKGSKDPEPKEEYTKRKDAWEQAM CCEEEEEECCEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH LKKLFGY HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA