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The map label for this gene is sgcQ [C]

Identifier: 156937615

GI number: 156937615

Start: 730149

End: 730955

Strand: Reverse

Name: sgcQ [C]

Synonym: Igni_0822

Alternate gene names: 156937615

Gene position: 730955-730149 (Counterclockwise)

Preceding gene: 156937616

Following gene: 156937614

Centisome position: 56.33

GC content: 62.21

Gene sequence:

>807_bases
GTGCTCGTAATAGGGGTCGTCCACTTGCTTCCGCTCCCCGGCTCATACGGGTGGGGCGGCGACTTCGACGCTGTAATAGA
AAGGGCCGTGAAGGACGCGAAGGCCCTCGAAAAGGGAGGGGTAGACGCTATAATAATAGAAAACTTTATGGACTACCCGT
TCCCCATAAGGGTGGATTACGTCACCGTAGCTGCCGCGACCCGAGTGGTTACAGAGGTCGTCCGCTCGCTGGAGCTAAGC
GCGGGAGTCAGCCTACTCCGGAACTCTGCGCCGGAAGCGATAGCAGTGGCCCTCGCGTCCGGGGCTAAGTTCGTGCGTTC
CAACCAGTGGTGTTGGACCTCTGACGCCCCTGAAGGGCTCCTCACGCCCGTGGCGAGGGAAGGGCTAGAGGTCATGAGGC
GCTGGGGCGCGAAGGTGGGAGTGGTAGCTGACGTCCGCGTGAAGCACGCAGCCCCAATCAGCGGGAGAGACTTGTGCGAC
GAGGCGCGCGACCTCGGAGGGCGGTGTAGGGCAGACGCCCTAGCCGTCTCGGGGGCGGCGACGGGGAGCGAGGCCGATCC
CCGACAGTTAGAGGTCGTTAAGACTTGTACGCCCAAGCCCGTGCTTGTGGCTTCTGGAATAACTCCGGAGAACGTGGTCC
GCTTCGCCTCGGCGGACGGCGTAATCGTTGGGACGTACTTCAAGGAAGGAGGGGTGACCGAGAACCCTGTGGACGTCCAC
AGGGTTAGGAAGCTAGTAGACGCTGCGAAGAGGCTTGGATCCGGGGAGAGGGAAGAGGTCCTCCGCCGCGCATTAGGGAT
ATCATGA

Upstream 100 bases:

>100_bases
GCGGACTTGTCATTTATGAGTTAAGGTCGAGAGGTCAGCATCTCGGATCATCGAGCGAGGACGTATGGGCGCCTAACGCT
AGGGCCCCGCGGGAGGGGCC

Downstream 100 bases:

>100_bases
AGCGTCGACTTTCAATAGCTCGTTTGAGGTCTTTATTGAGGTCTTTAGTATAGCGTAAGAGTCAGCGTAAATGATGTTAT
TGATTCCCGTACTCTTTAGG

Product: photosystem I assembly BtpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLVIGVVHLLPLPGSYGWGGDFDAVIERAVKDAKALEKGGVDAIIIENFMDYPFPIRVDYVTVAAATRVVTEVVRSLELS
AGVSLLRNSAPEAIAVALASGAKFVRSNQWCWTSDAPEGLLTPVAREGLEVMRRWGAKVGVVADVRVKHAAPISGRDLCD
EARDLGGRCRADALAVSGAATGSEADPRQLEVVKTCTPKPVLVASGITPENVVRFASADGVIVGTYFKEGGVTENPVDVH
RVRKLVDAAKRLGSGEREEVLRRALGIS

Sequences:

>Translated_268_residues
MLVIGVVHLLPLPGSYGWGGDFDAVIERAVKDAKALEKGGVDAIIIENFMDYPFPIRVDYVTVAAATRVVTEVVRSLELS
AGVSLLRNSAPEAIAVALASGAKFVRSNQWCWTSDAPEGLLTPVAREGLEVMRRWGAKVGVVADVRVKHAAPISGRDLCD
EARDLGGRCRADALAVSGAATGSEADPRQLEVVKTCTPKPVLVASGITPENVVRFASADGVIVGTYFKEGGVTENPVDVH
RVRKLVDAAKRLGSGEREEVLRRALGIS
>Mature_268_residues
MLVIGVVHLLPLPGSYGWGGDFDAVIERAVKDAKALEKGGVDAIIIENFMDYPFPIRVDYVTVAAATRVVTEVVRSLELS
AGVSLLRNSAPEAIAVALASGAKFVRSNQWCWTSDAPEGLLTPVAREGLEVMRRWGAKVGVVADVRVKHAAPISGRDLCD
EARDLGGRCRADALAVSGAATGSEADPRQLEVVKTCTPKPVLVASGITPENVVRFASADGVIVGTYFKEGGVTENPVDVH
RVRKLVDAAKRLGSGEREEVLRRALGIS

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=256, Percent_Identity=31.25, Blast_Score=103, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI115532828, Length=260, Percent_Identity=30.3846153846154, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24659916, Length=237, Percent_Identity=29.1139240506329, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 28437; Mature: 28437

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIGVVHLLPLPGSYGWGGDFDAVIERAVKDAKALEKGGVDAIIIENFMDYPFPIRVDY
CEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCEEEHH
VTVAAATRVVTEVVRSLELSAGVSLLRNSAPEAIAVALASGAKFVRSNQWCWTSDAPEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCEECCCCCCHH
LTPVAREGLEVMRRWGAKVGVVADVRVKHAAPISGRDLCDEARDLGGRCRADALAVSGAA
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHEEECCCC
TGSEADPRQLEVVKTCTPKPVLVASGITPENVVRFASADGVIVGTYFKEGGVTENPVDVH
CCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHH
RVRKLVDAAKRLGSGEREEVLRRALGIS
HHHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLVIGVVHLLPLPGSYGWGGDFDAVIERAVKDAKALEKGGVDAIIIENFMDYPFPIRVDY
CEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCEEEHH
VTVAAATRVVTEVVRSLELSAGVSLLRNSAPEAIAVALASGAKFVRSNQWCWTSDAPEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCEECCCCCCHH
LTPVAREGLEVMRRWGAKVGVVADVRVKHAAPISGRDLCDEARDLGGRCRADALAVSGAA
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHEEECCCC
TGSEADPRQLEVVKTCTPKPVLVASGITPENVVRFASADGVIVGTYFKEGGVTENPVDVH
CCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHH
RVRKLVDAAKRLGSGEREEVLRRALGIS
HHHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]