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The map label for this gene is pfdB [H]

Identifier: 156937606

GI number: 156937606

Start: 720740

End: 721099

Strand: Direct

Name: pfdB [H]

Synonym: Igni_0813

Alternate gene names: 156937606

Gene position: 720740-721099 (Clockwise)

Preceding gene: 156937604

Following gene: 156937607

Centisome position: 55.55

GC content: 52.5

Gene sequence:

>360_bases
ATGAGCTTGGACGCCCAAGCGCAAAAGCTGTTAGCTCAATACCAGCAACAGCAAGAGGTCTACCAGAGCTTGGTCCAGCA
GAGGGTACTGCTGGAGGCCGAGCTCAAAGAGCTTAAGAAGGTCTTAGAAGAGCTCGAGAAGCTCCCAGAGGACGCCGAGC
TTTATAAGAACGTGGGCCACGTCCTATACAAAACCAAGAAGGACGATTTGGTTAAGGAAATAAAGGACAAGATAGACCTC
ATAGAGGTGAAGCTGGCCGGCCTGAAGAAGCAAGAGGAGCTCGTCAAGAGCGAGTTAGAAAAGCTCCGCCAGCAGTTGCA
GAAGGTGTTGAGCGGTGGAGGGCTGGCAGGAGGAGGTTGA

Upstream 100 bases:

>100_bases
GCCGATTTGTGCGCTCGACTGATGACGAATGTGGGACCTCGCCGACCCGTGCCTTACTTTTAATATATTGGCTTGGAGCG
CGTGGCTAGGGAGAGCCGGG

Downstream 100 bases:

>100_bases
GAAAGTAGTAGAAGCCCTCCTCAAGGCTTCTGAGCGCGTCGAGGAAGAGGTCAAGAAGAGGTTGGGCGAGAGGGCCCAAG
ACCTCGACCTAGAGATAGTT

Product: prefoldin, beta subunit

Products: NA

Alternate protein names: GimC subunit beta [H]

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSLDAQAQKLLAQYQQQQEVYQSLVQQRVLLEAELKELKKVLEELEKLPEDAELYKNVGHVLYKTKKDDLVKEIKDKIDL
IEVKLAGLKKQEELVKSELEKLRQQLQKVLSGGGLAGGG

Sequences:

>Translated_119_residues
MSLDAQAQKLLAQYQQQQEVYQSLVQQRVLLEAELKELKKVLEELEKLPEDAELYKNVGHVLYKTKKDDLVKEIKDKIDL
IEVKLAGLKKQEELVKSELEKLRQQLQKVLSGGGLAGGG
>Mature_118_residues
SLDAQAQKLLAQYQQQQEVYQSLVQQRVLLEAELKELKKVLEELEKLPEDAELYKNVGHVLYKTKKDDLVKEIKDKIDLI
EVKLAGLKKQEELVKSELEKLRQQLQKVLSGGGLAGGG

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053 [H]

Pfam domain/function: PF01920 Prefoldin_2 [H]

EC number: NA

Molecular weight: Translated: 13528; Mature: 13397

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDAQAQKLLAQYQQQQEVYQSLVQQRVLLEAELKELKKVLEELEKLPEDAELYKNVGH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VLYKTKKDDLVKEIKDKIDLIEVKLAGLKKQEELVKSELEKLRQQLQKVLSGGGLAGGG
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLDAQAQKLLAQYQQQQEVYQSLVQQRVLLEAELKELKKVLEELEKLPEDAELYKNVGH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VLYKTKKDDLVKEIKDKIDLIEVKLAGLKKQEELVKSELEKLRQQLQKVLSGGGLAGGG
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA