Click here to switch to the map view.

The map label for this gene is 156937589

Identifier: 156937589

GI number: 156937589

Start: 703413

End: 704177

Strand: Direct

Name: 156937589

Synonym: Igni_0796

Alternate gene names: NA

Gene position: 703413-704177 (Clockwise)

Preceding gene: 156937588

Following gene: 156937590

Centisome position: 54.21

GC content: 52.16

Gene sequence:

>765_bases
ATGTTCGTGGTGTTCGCCGGGACGGCCGGCTCGGGCAAGAGCAGCCTGGTGGCCTCCTTCAGTGACTGGATAAGGAAAGA
GGTCGGCTTGAAGATATCAGTGGTTAATTTGGACCCGGGCGCCGAGGCCCTCCCTTACCAGCCGGACTTCGACATACGCC
AACTGTTCACCATTAGGGAAATAATGCAGAAGTACGGGCTGGGGCCCAACGGCGCCTTCTTAAAGGCGGCCGAACTGTTG
GGAGAATATTCCAGAGAGATAATTAGGCATAAGGTGTTCAGAAGCTTCTCCGACTACATTTTGATAGATACGCCGGGCCA
GCTAGAGATGTTCTTGTTTAGGCCTGAAGGTACGCAGTTCTTGAAGAAGCTGGAGAGGCTGAGGCCAGTACTGATAGTCT
ACATAGTGGACGGCTCCTTGGCTCCCCACCCGGAGGACTTGCTAACGAGCTACATGTTGAGCTTAATGCTCCAAGCTAAG
TCAGAGCTCCAAGTGGTCACTGTGATAAATAAGGTCGACTTAGTAAGCGAGGAAGACATGAAAACCATTAGGTTGCTCAT
AGAGAACCCCGAGGAGTTCGCCAAGTCTGTGGCTGACAAGGTGGGAGGGATAGCCGGCGATATGATAATGGACTTGATAA
AGATAGTTGAGATGTACGCCCCTCCGGAGAGGGCTATACTGGTCTCCGCGAAGACTAAGGAAGGCTTGAGGGAGTTGTAC
GACCTCGTCCACGAGGTCTACTGTAGTTGTGGAGACCTTACTTGA

Upstream 100 bases:

>100_bases
CTCAGGGCGACGTTGAACTCCTTCCTCTATTGGATTTATGCGGCTTGTGAGAGCCTCTCCCAGCTCTTAAGTCTTCCTTA
GGCGGGCCTAAAGGAGAGCC

Downstream 100 bases:

>100_bases
AGCGTCGCCAGCCTTTGGCCCCTCGTCACCCCTCAGCTCCTGCGTGGCCGCTCATCCGCCTCTCGATTAATCTTCCCGCC
TCGACCGCTACTTAGAGGTT

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFVVFAGTAGSGKSSLVASFSDWIRKEVGLKISVVNLDPGAEALPYQPDFDIRQLFTIREIMQKYGLGPNGAFLKAAELL
GEYSREIIRHKVFRSFSDYILIDTPGQLEMFLFRPEGTQFLKKLERLRPVLIVYIVDGSLAPHPEDLLTSYMLSLMLQAK
SELQVVTVINKVDLVSEEDMKTIRLLIENPEEFAKSVADKVGGIAGDMIMDLIKIVEMYAPPERAILVSAKTKEGLRELY
DLVHEVYCSCGDLT

Sequences:

>Translated_254_residues
MFVVFAGTAGSGKSSLVASFSDWIRKEVGLKISVVNLDPGAEALPYQPDFDIRQLFTIREIMQKYGLGPNGAFLKAAELL
GEYSREIIRHKVFRSFSDYILIDTPGQLEMFLFRPEGTQFLKKLERLRPVLIVYIVDGSLAPHPEDLLTSYMLSLMLQAK
SELQVVTVINKVDLVSEEDMKTIRLLIENPEEFAKSVADKVGGIAGDMIMDLIKIVEMYAPPERAILVSAKTKEGLRELY
DLVHEVYCSCGDLT
>Mature_254_residues
MFVVFAGTAGSGKSSLVASFSDWIRKEVGLKISVVNLDPGAEALPYQPDFDIRQLFTIREIMQKYGLGPNGAFLKAAELL
GEYSREIIRHKVFRSFSDYILIDTPGQLEMFLFRPEGTQFLKKLERLRPVLIVYIVDGSLAPHPEDLLTSYMLSLMLQAK
SELQVVTVINKVDLVSEEDMKTIRLLIENPEEFAKSVADKVGGIAGDMIMDLIKIVEMYAPPERAILVSAKTKEGLRELY
DLVHEVYCSCGDLT

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI223005897, Length=235, Percent_Identity=26.8085106382979, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI223005899, Length=208, Percent_Identity=26.4423076923077, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI88759337, Length=173, Percent_Identity=30.0578034682081, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI256818742, Length=185, Percent_Identity=29.1891891891892, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI223005901, Length=180, Percent_Identity=25, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI283046688, Length=195, Percent_Identity=27.6923076923077, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI256818744, Length=160, Percent_Identity=28.75, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17552462, Length=242, Percent_Identity=27.6859504132231, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI25141394, Length=177, Percent_Identity=29.3785310734463, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17556506, Length=197, Percent_Identity=26.9035532994924, Blast_Score=78, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6322532, Length=175, Percent_Identity=30.2857142857143, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6324836, Length=173, Percent_Identity=30.635838150289, Blast_Score=82, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6323272, Length=175, Percent_Identity=27.4285714285714, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45550609, Length=179, Percent_Identity=30.1675977653631, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI18543199, Length=172, Percent_Identity=29.6511627906977, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21358191, Length=197, Percent_Identity=30.4568527918782, Blast_Score=85, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28470; Mature: 28470

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVVFAGTAGSGKSSLVASFSDWIRKEVGLKISVVNLDPGAEALPYQPDFDIRQLFTIRE
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
IMQKYGLGPNGAFLKAAELLGEYSREIIRHKVFRSFSDYILIDTPGQLEMFLFRPEGTQF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHH
LKKLERLRPVLIVYIVDGSLAPHPEDLLTSYMLSLMLQAKSELQVVTVINKVDLVSEEDM
HHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHCCHHHH
KTIRLLIENPEEFAKSVADKVGGIAGDMIMDLIKIVEMYAPPERAILVSAKTKEGLRELY
HHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH
DLVHEVYCSCGDLT
HHHHHHHHHCCCCC
>Mature Secondary Structure
MFVVFAGTAGSGKSSLVASFSDWIRKEVGLKISVVNLDPGAEALPYQPDFDIRQLFTIRE
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
IMQKYGLGPNGAFLKAAELLGEYSREIIRHKVFRSFSDYILIDTPGQLEMFLFRPEGTQF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHH
LKKLERLRPVLIVYIVDGSLAPHPEDLLTSYMLSLMLQAKSELQVVTVINKVDLVSEEDM
HHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHCCHHHH
KTIRLLIENPEEFAKSVADKVGGIAGDMIMDLIKIVEMYAPPERAILVSAKTKEGLRELY
HHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH
DLVHEVYCSCGDLT
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA