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The map label for this gene is 156937563

Identifier: 156937563

GI number: 156937563

Start: 687639

End: 688712

Strand: Direct

Name: 156937563

Synonym: Igni_0770

Alternate gene names: NA

Gene position: 687639-688712 (Clockwise)

Preceding gene: 156937562

Following gene: 156937564

Centisome position: 53.0

GC content: 51.12

Gene sequence:

>1074_bases
ATGAGCGCGATCGCCGGAGGCGGTACCCTCAAGTGCCCCGTCTGTGGGAGTACCTACGTAGTTCAAAACGAGATGGGCGA
TTTGGTCTGCGCTAGCTGCGGGACAGTGTTGCAAGAGTCGCGCGAAGTCAGCTTCGATTCGTTCGAGGGGTACGGGAGCG
ATAACAAACCGATAGTCAGCAGGGGCGCTCTGACCGTTAGCCTCCATGACAAGGGCTTGGGAAGTGTCATAGATATTAAG
GATATACACAACTTCAGATTCAAGAAAATGGCAAAGCTCCATAGCCGCTTGAAGATAGGCGATGACAAGGAGAGCTTCAT
AGCGGATGTCAAGAAGGGTATTGAAGAATACTCTTCGCTCATAGCGAGGACTTTCGGAACTCCCCTCGGTAAGCAGATAG
TTGCGAACGCACACGCCGTTTCCGACAAGATATATGACTTGCTCCCGAAAGAATACAGGAAGAAGGATATAGAGTACAGG
AGGAAGGTAGGGCTCGCCATAATATTAGCCGTGATAAAGGAGTGCGGCTCTTATATACCTCCGGAAGTGGTGCTTAACAA
GCTCGGCTTGGACTCTGAAGAGCAGAAAACGGTCAAGGAGCTCTACGTATTAGTGCACGACGCCATAGTCCACGGCGGGA
CGAAGGGGAGCAAGGAGAAGGTGTTGAAATGTAATACTACGACGAGAGAGAAGTTAACCAAAGTAACAGAAGCCTTGCTC
AACTTCCTCGAGCTGCACTCCGGGCTGCAGCTCCCGAGGAAGACTCTCGCGCTGGAAACTATACATAAGATTTCCAACGC
TTTCATAAAAGCGAAGAAGGACAGCCTGGGGAGTAAGTACATTAGCTCATACGTGGGCGGCGCGATCTATTTGACGTTGC
GCATCTTAGCCATAGACCAAAAGTCCATGCTGACCCAAGAAGAGATAGCGAAGGCTTTGGGTAGGGGCTCGAACGCTATC
AGAAACGCGTACACGGAGATAGTCGACAACGTTCTAGTAATTGTGGAAGTGCCGGCGAAGCCCGCGAAAAATAAATCTAG
GAAGTCCGGGAAGGCAGACGGGTCGCGGCGTTGA

Upstream 100 bases:

>100_bases
CATGAAAGTTTTAGACATCATTGGGCCGGTACAAGAGCCTTTCGTCGTAGCTAAAGCCCTCGGAGAAACCCGAAAGAGCA
ACACTACGGGGTGATAGTCC

Downstream 100 bases:

>100_bases
ACGAGAACGAGGCAATAAACGCTCTAATAAACGTAATCGGGACCCTCTTCGCAAGGCTCCGCGAGGTCGTAGCTCACTAC
CTCCAACTTTACGTCTTCTC

Product: transcription initiation factor IIB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSAIAGGGTLKCPVCGSTYVVQNEMGDLVCASCGTVLQESREVSFDSFEGYGSDNKPIVSRGALTVSLHDKGLGSVIDIK
DIHNFRFKKMAKLHSRLKIGDDKESFIADVKKGIEEYSSLIARTFGTPLGKQIVANAHAVSDKIYDLLPKEYRKKDIEYR
RKVGLAIILAVIKECGSYIPPEVVLNKLGLDSEEQKTVKELYVLVHDAIVHGGTKGSKEKVLKCNTTTREKLTKVTEALL
NFLELHSGLQLPRKTLALETIHKISNAFIKAKKDSLGSKYISSYVGGAIYLTLRILAIDQKSMLTQEEIAKALGRGSNAI
RNAYTEIVDNVLVIVEVPAKPAKNKSRKSGKADGSRR

Sequences:

>Translated_357_residues
MSAIAGGGTLKCPVCGSTYVVQNEMGDLVCASCGTVLQESREVSFDSFEGYGSDNKPIVSRGALTVSLHDKGLGSVIDIK
DIHNFRFKKMAKLHSRLKIGDDKESFIADVKKGIEEYSSLIARTFGTPLGKQIVANAHAVSDKIYDLLPKEYRKKDIEYR
RKVGLAIILAVIKECGSYIPPEVVLNKLGLDSEEQKTVKELYVLVHDAIVHGGTKGSKEKVLKCNTTTREKLTKVTEALL
NFLELHSGLQLPRKTLALETIHKISNAFIKAKKDSLGSKYISSYVGGAIYLTLRILAIDQKSMLTQEEIAKALGRGSNAI
RNAYTEIVDNVLVIVEVPAKPAKNKSRKSGKADGSRR
>Mature_356_residues
SAIAGGGTLKCPVCGSTYVVQNEMGDLVCASCGTVLQESREVSFDSFEGYGSDNKPIVSRGALTVSLHDKGLGSVIDIKD
IHNFRFKKMAKLHSRLKIGDDKESFIADVKKGIEEYSSLIARTFGTPLGKQIVANAHAVSDKIYDLLPKEYRKKDIEYRR
KVGLAIILAVIKECGSYIPPEVVLNKLGLDSEEQKTVKELYVLVHDAIVHGGTKGSKEKVLKCNTTTREKLTKVTEALLN
FLELHSGLQLPRKTLALETIHKISNAFIKAKKDSLGSKYISSYVGGAIYLTLRILAIDQKSMLTQEEIAKALGRGSNAIR
NAYTEIVDNVLVIVEVPAKPAKNKSRKSGKADGSRR

Specific function: Unknown

COG id: COG1405

COG function: function code K; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39068; Mature: 38937

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS51134 ZF_TFIIB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIAGGGTLKCPVCGSTYVVQNEMGDLVCASCGTVLQESREVSFDSFEGYGSDNKPIVS
CCCCCCCCEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
RGALTVSLHDKGLGSVIDIKDIHNFRFKKMAKLHSRLKIGDDKESFIADVKKGIEEYSSL
CCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
IARTFGTPLGKQIVANAHAVSDKIYDLLPKEYRKKDIEYRRKVGLAIILAVIKECGSYIP
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PEVVLNKLGLDSEEQKTVKELYVLVHDAIVHGGTKGSKEKVLKCNTTTREKLTKVTEALL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHH
NFLELHSGLQLPRKTLALETIHKISNAFIKAKKDSLGSKYISSYVGGAIYLTLRILAIDQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCH
KSMLTQEEIAKALGRGSNAIRNAYTEIVDNVLVIVEVPAKPAKNKSRKSGKADGSRR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAIAGGGTLKCPVCGSTYVVQNEMGDLVCASCGTVLQESREVSFDSFEGYGSDNKPIVS
CCCCCCCEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
RGALTVSLHDKGLGSVIDIKDIHNFRFKKMAKLHSRLKIGDDKESFIADVKKGIEEYSSL
CCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
IARTFGTPLGKQIVANAHAVSDKIYDLLPKEYRKKDIEYRRKVGLAIILAVIKECGSYIP
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PEVVLNKLGLDSEEQKTVKELYVLVHDAIVHGGTKGSKEKVLKCNTTTREKLTKVTEALL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHH
NFLELHSGLQLPRKTLALETIHKISNAFIKAKKDSLGSKYISSYVGGAIYLTLRILAIDQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCH
KSMLTQEEIAKALGRGSNAIRNAYTEIVDNVLVIVEVPAKPAKNKSRKSGKADGSRR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA