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The map label for this gene is lysK [H]

Identifier: 156937457

GI number: 156937457

Start: 595927

End: 596946

Strand: Reverse

Name: lysK [H]

Synonym: Igni_0664

Alternate gene names: 156937457

Gene position: 596946-595927 (Counterclockwise)

Preceding gene: 156937458

Following gene: 156937456

Centisome position: 46.01

GC content: 61.27

Gene sequence:

>1020_bases
ATGATAGCCTTTGAAGTGTTGAAGAGAATAGTATCCGTCTACTCGCCCAGCGGCGAGGAGGACGAGGCGGCGGAGACGTT
GGCAGAGGCCTTGGAGGAGCTCAGCGGCGGCACTTTGGAGGTCTGGAGGGACGGGGCGGGCAACGTGCTGGCGGCTCCCA
AGAGGAAGTCCGAGTACTCGCTGGCGCTGATCTCCCACATAGATACGGTCCCCGGGTTCTGGGAACCCAAGATCACGGAG
AACTCCATAAGCGGGAGGGGGGCAGTGGACGCCAAGGGGCCTCTGTCGGCCATGAGTGAAGCGTTGATCAAGCTGGCGGA
GGAGGGCAAGGACGTTCTGCTGGGGGCGATGGTCGGCGAGGAGGACGACAGCCGCGGGGCAAAGTACTTGAGGGACCACG
GCCCCAAACTGAAGTACGTAATAATAGGCGAGCCCTCCAACACGCGCGACGTGGTCGTGGGCTACAGGGGGTACGCGTGG
CTGGAGGTGAAGTGCAGAGCCAAGGGCGGCCACGCCTCCTCACCAGAGGTCGGGGAGAACGCGGTAGAGAAGCTGTGGGG
AATTTACCAGAAGGCGAAGGAGAGGCTCAGCCCGGCCACAGTGAGCCTTACGTCCATTAAGAGTTGGAACGCGTTCAACG
TCCTCCCCACCGAGGTCATAGCTCGCTTCGACGTGCGGTTCCCCGCCTCCGTAAAGTTGGAGGACATTTTGGACAGTTTC
TCGGAGTGCGAGGTAACCTTGAAGGACTGGTTGGGGCCGGTGGAGGTGAAGCCCACCTCTCCGGTGCCCAGAGCTTTGAG
GAGGGCGCTGCTCCAGCACGGGGTTAAGGGGAAGTTCGTTAGGAAGAGGGGAACTAGCGACATGAACGTCCTAGGTGGTT
CAGTGGAGAGCATCGCTGCTTACGGGCCCGGCGCCAGCGAGCTCTCGCACACTGAGAAGGAAGTCATAACTAAGGAGGAG
TTGGAGACGGCCGTGAAGACCTACGTGGCGGCCGGAAGGGAGCTCGCCGATGACCTATGA

Upstream 100 bases:

>100_bases
TGAAGGACTGTTTGAAGGGGAAGTCGCTCTACCCTTGGAGGCCCTTGGAGATTTGACCCCTCTTTGAAAAGCCTTCCCGT
GAGCGGAGCGAGGGGTACGG

Downstream 100 bases:

>100_bases
AGAGGAGCTCCGGAGGGTCTACTCGAGGAAGGACTTGCTATCCTCATACTTGTTGAAGCTGAGGGTGAGAAAGGGAGACG
TCGAAAGGGTCTTGAAGAAG

Product: N2-acetyl-L-lysine deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MIAFEVLKRIVSVYSPSGEEDEAAETLAEALEELSGGTLEVWRDGAGNVLAAPKRKSEYSLALISHIDTVPGFWEPKITE
NSISGRGAVDAKGPLSAMSEALIKLAEEGKDVLLGAMVGEEDDSRGAKYLRDHGPKLKYVIIGEPSNTRDVVVGYRGYAW
LEVKCRAKGGHASSPEVGENAVEKLWGIYQKAKERLSPATVSLTSIKSWNAFNVLPTEVIARFDVRFPASVKLEDILDSF
SECEVTLKDWLGPVEVKPTSPVPRALRRALLQHGVKGKFVRKRGTSDMNVLGGSVESIAAYGPGASELSHTEKEVITKEE
LETAVKTYVAAGRELADDL

Sequences:

>Translated_339_residues
MIAFEVLKRIVSVYSPSGEEDEAAETLAEALEELSGGTLEVWRDGAGNVLAAPKRKSEYSLALISHIDTVPGFWEPKITE
NSISGRGAVDAKGPLSAMSEALIKLAEEGKDVLLGAMVGEEDDSRGAKYLRDHGPKLKYVIIGEPSNTRDVVVGYRGYAW
LEVKCRAKGGHASSPEVGENAVEKLWGIYQKAKERLSPATVSLTSIKSWNAFNVLPTEVIARFDVRFPASVKLEDILDSF
SECEVTLKDWLGPVEVKPTSPVPRALRRALLQHGVKGKFVRKRGTSDMNVLGGSVESIAAYGPGASELSHTEKEVITKEE
LETAVKTYVAAGRELADDL
>Mature_339_residues
MIAFEVLKRIVSVYSPSGEEDEAAETLAEALEELSGGTLEVWRDGAGNVLAAPKRKSEYSLALISHIDTVPGFWEPKITE
NSISGRGAVDAKGPLSAMSEALIKLAEEGKDVLLGAMVGEEDDSRGAKYLRDHGPKLKYVIIGEPSNTRDVVVGYRGYAW
LEVKCRAKGGHASSPEVGENAVEKLWGIYQKAKERLSPATVSLTSIKSWNAFNVLPTEVIARFDVRFPASVKLEDILDSF
SECEVTLKDWLGPVEVKPTSPVPRALRRALLQHGVKGKFVRKRGTSDMNVLGGSVESIAAYGPGASELSHTEKEVITKEE
LETAVKTYVAAGRELADDL

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family. LysK subfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI17551016, Length=351, Percent_Identity=25.3561253561254, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010175
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.1.-

Molecular weight: Translated: 36739; Mature: 36739

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFEVLKRIVSVYSPSGEEDEAAETLAEALEELSGGTLEVWRDGAGNVLAAPKRKSEYS
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCHH
LALISHIDTVPGFWEPKITENSISGRGAVDAKGPLSAMSEALIKLAEEGKDVLLGAMVGE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHCCC
EDDSRGAKYLRDHGPKLKYVIIGEPSNTRDVVVGYRGYAWLEVKCRAKGGHASSPEVGEN
CCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCCHH
AVEKLWGIYQKAKERLSPATVSLTSIKSWNAFNVLPTEVIARFDVRFPASVKLEDILDSF
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCH
SECEVTLKDWLGPVEVKPTSPVPRALRRALLQHGVKGKFVRKRGTSDMNVLGGSVESIAA
HHCEEEHHHCCCCEECCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCCHHHHHH
YGPGASELSHTEKEVITKEELETAVKTYVAAGRELADDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
>Mature Secondary Structure
MIAFEVLKRIVSVYSPSGEEDEAAETLAEALEELSGGTLEVWRDGAGNVLAAPKRKSEYS
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCHH
LALISHIDTVPGFWEPKITENSISGRGAVDAKGPLSAMSEALIKLAEEGKDVLLGAMVGE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHCCC
EDDSRGAKYLRDHGPKLKYVIIGEPSNTRDVVVGYRGYAWLEVKCRAKGGHASSPEVGEN
CCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCEEEEEEEEEECCCCCCCCCCCHH
AVEKLWGIYQKAKERLSPATVSLTSIKSWNAFNVLPTEVIARFDVRFPASVKLEDILDSF
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCH
SECEVTLKDWLGPVEVKPTSPVPRALRRALLQHGVKGKFVRKRGTSDMNVLGGSVESIAA
HHCEEEHHHCCCCEECCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHCCCHHHHHH
YGPGASELSHTEKEVITKEELETAVKTYVAAGRELADDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA