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The map label for this gene is 156937454

Identifier: 156937454

GI number: 156937454

Start: 594439

End: 594939

Strand: Reverse

Name: 156937454

Synonym: Igni_0661

Alternate gene names: NA

Gene position: 594939-594439 (Counterclockwise)

Preceding gene: 156937456

Following gene: 156937453

Centisome position: 45.85

GC content: 59.28

Gene sequence:

>501_bases
GTGCGCCCCGAGGGTGGGGTTACGAAGTTCGTCCACGACACCGGCTCCCTCTTGGCGGGCATGCCGTCTCTGATGCCCGG
GGAGAACTACACCACCCCGCTCAACTTGAAAGAGGTGAAGGACAAGGACTCCAAGGACGCCTTGAAACGTTACGAAGCGA
AGCTGAAGGTGATGGAGCCCGATAAAGCATACGTGATAAAGGTAAAGAAGAGGTGCGAGGAGCTGGGGGAGAGGCTGAGC
GAAACGGACGTCGCGGTGGTGGCCCTCGCCCTCCAGCTGCACGCCACGCTTTTGAGCGACGACTACGGAGTACTTAACGT
GGCCAAGAGCTTCGGTTTGGAAGCGAGGAGCGTGAGGACCAAGGGGATAGGCGGAGTAATCAAGTGGGTCAATTACTGCC
CGTTCTGTAGGAAGGAGTACCCGCCGTGGGTTAAGGTCTGCCCGGACTGCGGCTCAGTTTTGAGGAGGCGTCCCTCGAAG
CTAGCTTCCCGCGAGGGTTGA

Upstream 100 bases:

>100_bases
TTTGAAGCCTTCGTGGACGAAGAACCTCGCCTCGGCCTCGTAGGGCTTCACCTTTCCGTCCCCTCGGCCGGGTTGAGGGG
AACTTTATTCGCAAGGCTCC

Downstream 100 bases:

>100_bases
GGGAGGCGTAGTGAGGTACTTCATTACGACCTTCTCGAGTGTTATGGGTATAGGCCTAATGTTAAGCGTGATATACCAGA
ACCCTTTGATTTTAGGGACG

Product: nucleic acid binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MRPEGGVTKFVHDTGSLLAGMPSLMPGENYTTPLNLKEVKDKDSKDALKRYEAKLKVMEPDKAYVIKVKKRCEELGERLS
ETDVAVVALALQLHATLLSDDYGVLNVAKSFGLEARSVRTKGIGGVIKWVNYCPFCRKEYPPWVKVCPDCGSVLRRRPSK
LASREG

Sequences:

>Translated_166_residues
MRPEGGVTKFVHDTGSLLAGMPSLMPGENYTTPLNLKEVKDKDSKDALKRYEAKLKVMEPDKAYVIKVKKRCEELGERLS
ETDVAVVALALQLHATLLSDDYGVLNVAKSFGLEARSVRTKGIGGVIKWVNYCPFCRKEYPPWVKVCPDCGSVLRRRPSK
LASREG
>Mature_166_residues
MRPEGGVTKFVHDTGSLLAGMPSLMPGENYTTPLNLKEVKDKDSKDALKRYEAKLKVMEPDKAYVIKVKKRCEELGERLS
ETDVAVVALALQLHATLLSDDYGVLNVAKSFGLEARSVRTKGIGGVIKWVNYCPFCRKEYPPWVKVCPDCGSVLRRRPSK
LASREG

Specific function: Unknown

COG id: COG1439

COG function: function code R; Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0129 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR022907 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 18456; Mature: 18456

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPEGGVTKFVHDTGSLLAGMPSLMPGENYTTPLNLKEVKDKDSKDALKRYEAKLKVMEP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHEEECC
DKAYVIKVKKRCEELGERLSETDVAVVALALQLHATLLSDDYGVLNVAKSFGLEARSVRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
KGIGGVIKWVNYCPFCRKEYPPWVKVCPDCGSVLRRRPSKLASREG
CCHHHHHHHHHHCCHHHHCCCCCEEECCHHHHHHHHCHHHHHCCCC
>Mature Secondary Structure
MRPEGGVTKFVHDTGSLLAGMPSLMPGENYTTPLNLKEVKDKDSKDALKRYEAKLKVMEP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHEEECC
DKAYVIKVKKRCEELGERLSETDVAVVALALQLHATLLSDDYGVLNVAKSFGLEARSVRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
KGIGGVIKWVNYCPFCRKEYPPWVKVCPDCGSVLRRRPSKLASREG
CCHHHHHHHHHHCCHHHHCCCCCEEECCHHHHHHHHCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]