| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937405
Identifier: 156937405
GI number: 156937405
Start: 548278
End: 548958
Strand: Direct
Name: 156937405
Synonym: Igni_0612
Alternate gene names: NA
Gene position: 548278-548958 (Clockwise)
Preceding gene: 156937403
Following gene: 156937406
Centisome position: 42.26
GC content: 52.13
Gene sequence:
>681_bases ATGAGCTCGGACGCCCAACGACGAGCGGCGAACCACGCCGTACTCGTTGTGGACCCCTTTCTTAAGGATGCGATAGAAAA CATCATGAGGGAGGGACAGATAGGCGAGGTCTCGGAAACTACCTTCCCAGACGTGATCTTTACGAAATCTTGGAGTAACG ACGTAGCCTTGTTGACGTTTGCAGACTCGCAGTACCTAGCAGAAGCCATCTTGGAGCTCAAGGTCCTCGGAATGAGGAAG ATCGTCTTCTTAGACGTGGCCACCGCACTCAAACCCGGCTTAAAGGTGTCCCAAGCGTACCCCGTTTACGCCACCAGCAC GCCGGTGAAAGAGGAATTCTACGTACCGTTGGTACCCAGCATGCAACTGCTCAACGCTGTAGTGGAGCTCTTGGAGCCCG AGAGGGAAGTAATAGCGTTCACTTCCCGCTTGCCGCCTCAAGACGTAGCAATGACAGACCTCCTCAAGAAGAAGGGATTC GACGTTATCGATAAGAACTCCGGGCTGGTCTATGAGGTCTGTAAGGGAAGCGTGGAGTGCGTAACCCTAGACCTAATTGA CTCGAACTTAGCTAAGGGTATAGAAAAGAAGACCGCGTGGGAGGAGGGAGGGAAGTACTATTCTAGCATTTTGGACACCC TTACAGATTTATTCAAGAAGCTACTGAGTGCCGAGCTGTAG
Upstream 100 bases:
>100_bases TGCCTCTCTACTCGCCATCATGGCCCGTCCCCTTTCGGGAAGGGAGCTATTGGGGAGACCTTATATCTGAAACCCCCCTC TACGGCCGGGCTCAAAGGAG
Downstream 100 bases:
>100_bases GGGGAACCATGAAGCTCGACTTCTCTAAGATAAGAACAATGCTGGAACAGCTGGCGACCAAGGAGAAGAAGGCGAGGAGG CCCAAGGAGCGTGCAGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSSDAQRRAANHAVLVVDPFLKDAIENIMREGQIGEVSETTFPDVIFTKSWSNDVALLTFADSQYLAEAILELKVLGMRK IVFLDVATALKPGLKVSQAYPVYATSTPVKEEFYVPLVPSMQLLNAVVELLEPEREVIAFTSRLPPQDVAMTDLLKKKGF DVIDKNSGLVYEVCKGSVECVTLDLIDSNLAKGIEKKTAWEEGGKYYSSILDTLTDLFKKLLSAEL
Sequences:
>Translated_226_residues MSSDAQRRAANHAVLVVDPFLKDAIENIMREGQIGEVSETTFPDVIFTKSWSNDVALLTFADSQYLAEAILELKVLGMRK IVFLDVATALKPGLKVSQAYPVYATSTPVKEEFYVPLVPSMQLLNAVVELLEPEREVIAFTSRLPPQDVAMTDLLKKKGF DVIDKNSGLVYEVCKGSVECVTLDLIDSNLAKGIEKKTAWEEGGKYYSSILDTLTDLFKKLLSAEL >Mature_225_residues SSDAQRRAANHAVLVVDPFLKDAIENIMREGQIGEVSETTFPDVIFTKSWSNDVALLTFADSQYLAEAILELKVLGMRKI VFLDVATALKPGLKVSQAYPVYATSTPVKEEFYVPLVPSMQLLNAVVELLEPEREVIAFTSRLPPQDVAMTDLLKKKGFD VIDKNSGLVYEVCKGSVECVTLDLIDSNLAKGIEKKTAWEEGGKYYSSILDTLTDLFKKLLSAEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25011; Mature: 24880
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDAQRRAANHAVLVVDPFLKDAIENIMREGQIGEVSETTFPDVIFTKSWSNDVALLTF CCCHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEE ADSQYLAEAILELKVLGMRKIVFLDVATALKPGLKVSQAYPVYATSTPVKEEFYVPLVPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCH MQLLNAVVELLEPEREVIAFTSRLPPQDVAMTDLLKKKGFDVIDKNSGLVYEVCKGSVEC HHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCEEEHHHCCCEEE VTLDLIDSNLAKGIEKKTAWEEGGKYYSSILDTLTDLFKKLLSAEL EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSDAQRRAANHAVLVVDPFLKDAIENIMREGQIGEVSETTFPDVIFTKSWSNDVALLTF CCHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEE ADSQYLAEAILELKVLGMRKIVFLDVATALKPGLKVSQAYPVYATSTPVKEEFYVPLVPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCH MQLLNAVVELLEPEREVIAFTSRLPPQDVAMTDLLKKKGFDVIDKNSGLVYEVCKGSVEC HHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCEEEHHHCCCEEE VTLDLIDSNLAKGIEKKTAWEEGGKYYSSILDTLTDLFKKLLSAEL EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA