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The map label for this gene is 156937370

Identifier: 156937370

GI number: 156937370

Start: 520166

End: 520744

Strand: Reverse

Name: 156937370

Synonym: Igni_0577

Alternate gene names: NA

Gene position: 520744-520166 (Counterclockwise)

Preceding gene: 156937372

Following gene: 156937369

Centisome position: 40.13

GC content: 58.89

Gene sequence:

>579_bases
GTGCCGTTCGTCAAGAACGGTGACGTGGTGGCGCCGGGGGACCCTCTCTGCGTAATAGAGGAGTACGCCCCTGGCCCGGG
GACCTACGAGGACGACGGGATAGTCAGGGCGAGCATTCCGGGGACCGTGAGGATAGACACGGTCAACTACGTAATTGAGG
TGAGGGGGCCGAGCGCCGAGAAGAAGGTGTTGTCTCCGAAAGAAGTGGTTTACGGAGAGGTGGTGAGCATGAGGAATGAG
CTCGCCCAGCTGAAGGTTGCCAGAAGCTTCGACGAGGTATTTAGAGCCAGAGCCTTCAGCGCGGTCCTCCATATAAGCCA
AGCGGGAAAGCCCGTGGATAGCTTGTACGACGTCGTGAGGCCCGGCGACGTGGTCAAGGCCAAGGTTCTCTCTTCCCCGC
CCTACCAGCTGAGCCTCAAGGGCCCGAGGCTAGGGGTAATACTGGCTTACTGCAGCAACTGCGGTCATCCCTTGTACAAG
GTGGGCAACCAGCTCCAGTGCCCTTACTGCGGGAGGGTGGAGGACCGATTGATCTCCCCAGACTACATACTTAAAGCTAA
GCACCAGCCCAAGAAGTAA

Upstream 100 bases:

>100_bases
ATCCTCTTGGCGTCGCTAGGAGTGGGGTTCCGCAGCCTCACCTTCATGGACGCTCATCCCCTAAAATCCTTCTAACACGA
GCGGGGAGGGGGGTACAGAA

Downstream 100 bases:

>100_bases
GGAAAGATAATGAAGGTTAGACGCTTCGTCATTAAGTGTATTAACGAGGAGGTTTGTTACGAACTGCTCCACAAGATAAG
CGAAGAAGTGAGCGCGAGGT

Product: RNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPFVKNGDVVAPGDPLCVIEEYAPGPGTYEDDGIVRASIPGTVRIDTVNYVIEVRGPSAEKKVLSPKEVVYGEVVSMRNE
LAQLKVARSFDEVFRARAFSAVLHISQAGKPVDSLYDVVRPGDVVKAKVLSSPPYQLSLKGPRLGVILAYCSNCGHPLYK
VGNQLQCPYCGRVEDRLISPDYILKAKHQPKK

Sequences:

>Translated_192_residues
MPFVKNGDVVAPGDPLCVIEEYAPGPGTYEDDGIVRASIPGTVRIDTVNYVIEVRGPSAEKKVLSPKEVVYGEVVSMRNE
LAQLKVARSFDEVFRARAFSAVLHISQAGKPVDSLYDVVRPGDVVKAKVLSSPPYQLSLKGPRLGVILAYCSNCGHPLYK
VGNQLQCPYCGRVEDRLISPDYILKAKHQPKK
>Mature_191_residues
PFVKNGDVVAPGDPLCVIEEYAPGPGTYEDDGIVRASIPGTVRIDTVNYVIEVRGPSAEKKVLSPKEVVYGEVVSMRNEL
AQLKVARSFDEVFRARAFSAVLHISQAGKPVDSLYDVVRPGDVVKAKVLSSPPYQLSLKGPRLGVILAYCSNCGHPLYKV
GNQLQCPYCGRVEDRLISPDYILKAKHQPKK

Specific function: Unknown

COG id: COG1096

COG function: function code J; Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20997; Mature: 20865

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFVKNGDVVAPGDPLCVIEEYAPGPGTYEDDGIVRASIPGTVRIDTVNYVIEVRGPSAE
CCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEECCCCCH
KKVLSPKEVVYGEVVSMRNELAQLKVARSFDEVFRARAFSAVLHISQAGKPVDSLYDVVR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
PGDVVKAKVLSSPPYQLSLKGPRLGVILAYCSNCGHPLYKVGNQLQCPYCGRVEDRLISP
CCCCEEEEECCCCCEEEEECCCCCEEHEEEHHCCCCHHHHCCCCCCCCCCCCHHHHCCCC
DYILKAKHQPKK
CCEEECCCCCCC
>Mature Secondary Structure 
PFVKNGDVVAPGDPLCVIEEYAPGPGTYEDDGIVRASIPGTVRIDTVNYVIEVRGPSAE
CCCCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEECCCCCH
KKVLSPKEVVYGEVVSMRNELAQLKVARSFDEVFRARAFSAVLHISQAGKPVDSLYDVVR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
PGDVVKAKVLSSPPYQLSLKGPRLGVILAYCSNCGHPLYKVGNQLQCPYCGRVEDRLISP
CCCCEEEEECCCCCEEEEECCCCCEEHEEEHHCCCCHHHHCCCCCCCCCCCCHHHHCCCC
DYILKAKHQPKK
CCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA