Click here to switch to the map view.

The map label for this gene is 156937368

Identifier: 156937368

GI number: 156937368

Start: 519258

End: 519554

Strand: Reverse

Name: 156937368

Synonym: Igni_0575

Alternate gene names: NA

Gene position: 519554-519258 (Counterclockwise)

Preceding gene: 156937369

Following gene: 156937367

Centisome position: 40.04

GC content: 51.18

Gene sequence:

>297_bases
GTGAGGGCCGTGGCTCAAGTGATAGCCGAGCCCGAGGTCGTAGTTAGGAACGACAAAGAGGTGCGAATAAGGATACCAAA
CGAGAGCCACACCCTAGGGAACCTAATAACCAAGTTAGCTTCTAGGAAGAAGGGAGTTACGGCGCTCTACATGGTAGAGC
ACCCCCTAAGGCAAGTGTTGTGGATAACCATAAGGACCGACGGCTCCGTGGATCCCTACGAGGTCTTACTGGAAACCATA
GACGAAGCGATAAACTACCTAAATCAGTTCGTGAGGGAACTTGAAGAGGGGAAGTAG

Upstream 100 bases:

>100_bases
TGCGGGAGGGCCTCTTGGAGGAGGGCGACTTCAAGTACGAACAGAGGGAGGAGTGGAGGAAAGTAATAAAGCGGGTCTCA
GAGCGGCTCAGCGAAGAGTG

Downstream 100 bases:

>100_bases
CGTAGCGGTCTGCTGCGGCCGAGACCCCCTGGTGGTCCTCTCCGTCAAGGCGGGCTTGGTGGAACACGCATTCGTGGTTA
ACGACCCCCGGGAGCTCAAA

Product: DNA-directed RNA polymerase, subunit L

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MRAVAQVIAEPEVVVRNDKEVRIRIPNESHTLGNLITKLASRKKGVTALYMVEHPLRQVLWITIRTDGSVDPYEVLLETI
DEAINYLNQFVRELEEGK

Sequences:

>Translated_98_residues
MRAVAQVIAEPEVVVRNDKEVRIRIPNESHTLGNLITKLASRKKGVTALYMVEHPLRQVLWITIRTDGSVDPYEVLLETI
DEAINYLNQFVRELEEGK
>Mature_98_residues
MRAVAQVIAEPEVVVRNDKEVRIRIPNESHTLGNLITKLASRKKGVTALYMVEHPLRQVLWITIRTDGSVDPYEVLLETI
DEAINYLNQFVRELEEGK

Specific function: Unknown

COG id: COG1761

COG function: function code K; DNA-directed RNA polymerase, subunit L

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11241; Mature: 11241

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS01154 RNA_POL_L_13KD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVAQVIAEPEVVVRNDKEVRIRIPNESHTLGNLITKLASRKKGVTALYMVEHPLRQVL
CHHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHE
WITIRTDGSVDPYEVLLETIDEAINYLNQFVRELEEGK
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAVAQVIAEPEVVVRNDKEVRIRIPNESHTLGNLITKLASRKKGVTALYMVEHPLRQVL
CHHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHE
WITIRTDGSVDPYEVLLETIDEAINYLNQFVRELEEGK
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA