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The map label for this gene is yigC [C]

Identifier: 156937364

GI number: 156937364

Start: 515938

End: 517407

Strand: Reverse

Name: yigC [C]

Synonym: Igni_0571

Alternate gene names: 156937364

Gene position: 517407-515938 (Counterclockwise)

Preceding gene: 156937367

Following gene: 156937363

Centisome position: 39.88

GC content: 56.6

Gene sequence:

>1470_bases
TTGGTTTTGCTTGCTGGGGCGACCGGGGCTAGCTTGCTCGAGGACTTGAGGGATTACTTAAACTTACTCGATGAGAAAGG
TCTACTGCACAAGGTCAACGTCGAGGTAGACCCCGTCGAGGAGGTCCCCGAGGTTCTCAGGAGGCTCATGTGGAGGAGGT
TCGACAAGGCGGTCCTCTTCGAGAAGCTCAAGGGCTACCCCGACTGGAAGGTGGCCGGTAACTTGTTCGGTTCCACGAAT
TTGATAAAGCTGGCCTTGGGAACTGAGGAGCTCGAGGAGCTCGGGGAGAGGTTCCTCGCACCCTTCAAAGCTTCCGGAGC
GCGCAGCTTCGGTGAAAAGGTCAAGACCTTAATGGAGTTCATAAACATGGGAAAGTACCTACCCAAGAAAGTTCGCAAGG
GCCCCGTTTTAGAGAACGAAAAGGAGCCGGACTTCCTCTCGTTGCCGGCCTTTAAGACGTGGCCTAAGGACGCTTCGAGG
TACTTGACTTACGCTTTGACCGTTACGAAGGACCCGGAGAGCGGTACTTACAACTTCGGCATCTACCGGATAATGATATA
CTCTCCCAAGAGGGCCGTCATACATTGGCAAGTGCATAAGAGGGGGGCTTCTCACTACGCTAAATACAAAGAGCTAGGCT
TCGAGAAGATGCCAGTGGCCATTGTGATAGGCGGGGACCCCGCCACTTTGCTTACCGGAGCCCTTCCCGTCCCGGAGGGG
ATAGACAAGTACGCCTTCGCCGGGGTCTTGAGGGGCTCGCCGGTCAAGGTGGTAGAGGTAGGCGACCTCTTGGTCCCAGC
CTACGCGGAGGCTGTGATTACTGGTTACGTGAAGGTAGGCGAGCTCGCTTGGGAGGGCCCCTTCGGCGACCACACCGGCT
ATTACACCCCTAGGGACTTGTACCCCGTCTTCCACGCAGAGAAGTTCTTCGTGAGGACGGACCCAATTTACTACGGGACG
GTTGTGGGGAGGCCACCTATGGAGGACGCTTACATAGGCAAGGCGACGGAAAGGATATTCTTGCCTTTGATCAAGTGGCT
CGTCCCCGAGGTAATCGATATGAATTTGCCCCCCGAAGGGCTGTTCCACGGGATCGCCATAGTGTCCATAAGGAAGAAGT
ACCCCGGCCACGCGCGGAAGGTAGCTCACGCCTTGTTGGGCCTAGGCCAAATGAGCTTCACGAAAATCGTGATAGTGGTA
GACCAAGACGTGAACGTGCACGACTGGGGCGAGGTGGCTTACGCGATAGCTTCCACCGTAGACCCCGAGAGGGACGTAGA
GATCATTAGAAACGACGTGACAGACGTGCTGGACCACACCTCGCCCAGCCCTCCAGCTGGGAGCAAGATGATAATAGACG
CGACGAGGAAGTTCAAGGAAGAGTGCGGCTACGAGTGGCCGGAGCGGAGCGCGCCTGACCCCAAGGTCTCGGAATTGGTG
GAGAGGAGGTGGCGCGAGTACGGCTTTTAG

Upstream 100 bases:

>100_bases
CACCGCCGCGGTGCCGTCCTCGTACACCTCTTTCACGGTCGCGGGTATGCCTAGGCACATCGCTCTAAGACCCTCGGCCC
GCCTTCTGGTGGAGCGTTAA

Downstream 100 bases:

>100_bases
GTCAAAAGTCGCGCGTCGCGGGCCCTTAGCCGGAGCGTGCCGGCGAAAGGTGAAGGGGCTTGTGCGGGATCGTAGCGGTG
AGCTGCGCTAGGCCGTGCGT

Product: 3-octaprenyl-4hydroxybenzoate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MVLLAGATGASLLEDLRDYLNLLDEKGLLHKVNVEVDPVEEVPEVLRRLMWRRFDKAVLFEKLKGYPDWKVAGNLFGSTN
LIKLALGTEELEELGERFLAPFKASGARSFGEKVKTLMEFINMGKYLPKKVRKGPVLENEKEPDFLSLPAFKTWPKDASR
YLTYALTVTKDPESGTYNFGIYRIMIYSPKRAVIHWQVHKRGASHYAKYKELGFEKMPVAIVIGGDPATLLTGALPVPEG
IDKYAFAGVLRGSPVKVVEVGDLLVPAYAEAVITGYVKVGELAWEGPFGDHTGYYTPRDLYPVFHAEKFFVRTDPIYYGT
VVGRPPMEDAYIGKATERIFLPLIKWLVPEVIDMNLPPEGLFHGIAIVSIRKKYPGHARKVAHALLGLGQMSFTKIVIVV
DQDVNVHDWGEVAYAIASTVDPERDVEIIRNDVTDVLDHTSPSPPAGSKMIIDATRKFKEECGYEWPERSAPDPKVSELV
ERRWREYGF

Sequences:

>Translated_489_residues
MVLLAGATGASLLEDLRDYLNLLDEKGLLHKVNVEVDPVEEVPEVLRRLMWRRFDKAVLFEKLKGYPDWKVAGNLFGSTN
LIKLALGTEELEELGERFLAPFKASGARSFGEKVKTLMEFINMGKYLPKKVRKGPVLENEKEPDFLSLPAFKTWPKDASR
YLTYALTVTKDPESGTYNFGIYRIMIYSPKRAVIHWQVHKRGASHYAKYKELGFEKMPVAIVIGGDPATLLTGALPVPEG
IDKYAFAGVLRGSPVKVVEVGDLLVPAYAEAVITGYVKVGELAWEGPFGDHTGYYTPRDLYPVFHAEKFFVRTDPIYYGT
VVGRPPMEDAYIGKATERIFLPLIKWLVPEVIDMNLPPEGLFHGIAIVSIRKKYPGHARKVAHALLGLGQMSFTKIVIVV
DQDVNVHDWGEVAYAIASTVDPERDVEIIRNDVTDVLDHTSPSPPAGSKMIIDATRKFKEECGYEWPERSAPDPKVSELV
ERRWREYGF
>Mature_489_residues
MVLLAGATGASLLEDLRDYLNLLDEKGLLHKVNVEVDPVEEVPEVLRRLMWRRFDKAVLFEKLKGYPDWKVAGNLFGSTN
LIKLALGTEELEELGERFLAPFKASGARSFGEKVKTLMEFINMGKYLPKKVRKGPVLENEKEPDFLSLPAFKTWPKDASR
YLTYALTVTKDPESGTYNFGIYRIMIYSPKRAVIHWQVHKRGASHYAKYKELGFEKMPVAIVIGGDPATLLTGALPVPEG
IDKYAFAGVLRGSPVKVVEVGDLLVPAYAEAVITGYVKVGELAWEGPFGDHTGYYTPRDLYPVFHAEKFFVRTDPIYYGT
VVGRPPMEDAYIGKATERIFLPLIKWLVPEVIDMNLPPEGLFHGIAIVSIRKKYPGHARKVAHALLGLGQMSFTKIVIVV
DQDVNVHDWGEVAYAIASTVDPERDVEIIRNDVTDVLDHTSPSPPAGSKMIIDATRKFKEECGYEWPERSAPDPKVSELV
ERRWREYGF

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=486, Percent_Identity=38.6831275720165, Blast_Score=332, Evalue=3e-92,
Organism=Saccharomyces cerevisiae, GI6320748, Length=300, Percent_Identity=27, Blast_Score=84, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 54972; Mature: 54972

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLAGATGASLLEDLRDYLNLLDEKGLLHKVNVEVDPVEEVPEVLRRLMWRRFDKAVLF
CEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKLKGYPDWKVAGNLFGSTNLIKLALGTEELEELGERFLAPFKASGARSFGEKVKTLMEF
HHHCCCCCHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
INMGKYLPKKVRKGPVLENEKEPDFLSLPAFKTWPKDASRYLTYALTVTKDPESGTYNFG
HHHCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHCEEEEEEEEEECCCCCCEEEE
IYRIMIYSPKRAVIHWQVHKRGASHYAKYKELGFEKMPVAIVIGGDPATLLTGALPVPEG
EEEEEEECCCCEEEEEEEHHCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCC
IDKYAFAGVLRGSPVKVVEVGDLLVPAYAEAVITGYVKVGELAWEGPFGDHTGYYTPRDL
CHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEECCEEECCCCCCCCCCCCCCCC
YPVFHAEKFFVRTDPIYYGTVVGRPPMEDAYIGKATERIFLPLIKWLVPEVIDMNLPPEG
CHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
LFHGIAIVSIRKKYPGHARKVAHALLGLGQMSFTKIVIVVDQDVNVHDWGEVAYAIASTV
HHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCC
DPERDVEIIRNDVTDVLDHTSPSPPAGSKMIIDATRKFKEECGYEWPERSAPDPKVSELV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ERRWREYGF
HHHHHHCCC
>Mature Secondary Structure
MVLLAGATGASLLEDLRDYLNLLDEKGLLHKVNVEVDPVEEVPEVLRRLMWRRFDKAVLF
CEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKLKGYPDWKVAGNLFGSTNLIKLALGTEELEELGERFLAPFKASGARSFGEKVKTLMEF
HHHCCCCCHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
INMGKYLPKKVRKGPVLENEKEPDFLSLPAFKTWPKDASRYLTYALTVTKDPESGTYNFG
HHHCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHCEEEEEEEEEECCCCCCEEEE
IYRIMIYSPKRAVIHWQVHKRGASHYAKYKELGFEKMPVAIVIGGDPATLLTGALPVPEG
EEEEEEECCCCEEEEEEEHHCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCCC
IDKYAFAGVLRGSPVKVVEVGDLLVPAYAEAVITGYVKVGELAWEGPFGDHTGYYTPRDL
CHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEECCEEECCCCCCCCCCCCCCCC
YPVFHAEKFFVRTDPIYYGTVVGRPPMEDAYIGKATERIFLPLIKWLVPEVIDMNLPPEG
CHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
LFHGIAIVSIRKKYPGHARKVAHALLGLGQMSFTKIVIVVDQDVNVHDWGEVAYAIASTV
HHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCC
DPERDVEIIRNDVTDVLDHTSPSPPAGSKMIIDATRKFKEECGYEWPERSAPDPKVSELV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ERRWREYGF
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]