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The map label for this gene is yigC [C]

Identifier: 156937344

GI number: 156937344

Start: 495273

End: 496511

Strand: Reverse

Name: yigC [C]

Synonym: Igni_0551

Alternate gene names: 156937344

Gene position: 496511-495273 (Counterclockwise)

Preceding gene: 156937345

Following gene: 156937341

Centisome position: 38.27

GC content: 59.81

Gene sequence:

>1239_bases
GTGAGGCTCTCCGAGCTGGCGGAGGCTTTGGGCGCGGAGAGGATAGGCGAGGTCCCGCGGGAGAGGGTAAAGGAGGTCTT
AGAAAAGTACGAGAGGCTCGGAAAGCCAGTAATCTATAAGGTGGAGGGTTGGGAGCCGGAGGTAGTCTCGGCCCTCTACT
CCTCAAGGGAGGCCGTCTGGAAGGCCTTGAACGCGGGGAGCGACGAGGAGGCCTATGAGAAGCTCTTGCACTATAAAAAG
GGTACGATGGAGATAGTTCCGTTCTCGTACAGAAAGGTGGATAGCTTGGATTACTTGCCTTGGGTCAAGTTCTACCCAGA
GGACGGGGGAGCTTACCACACGGCGAGCGTCTACGTCGCTTGTTTGGACGACGTCTGCAACGCCTCTTACCACAGAACGA
TGTACTTGGGGCCCCGCAAGGCCGCCTTAAGGATGGTACCCCGTCACTTGTACAAGATGTACAAAGAAGCCCTCGAGAGA
GGGGAAGAACTCAAGGTAGCGGTAGTGATAGGCGCCCCCAGCGAGGTGGAGTTCGCCGCGGCCCTCTCCCTCCCCTTCGG
GGAGTTCGAGCTGGAGGTCGCTGCAAGCCTCGCCGGCTCCTTGGAGGTGAGCAAGACGCCCTTGTACTCCCTCCCCGTTC
CCGCCCGCGCGGGGGCCGTCATAGAGGGCCGCATAACCGCCGAGAGGGTAGACGAGGGCCCGTTCGTAGACTTGCTCCAC
ACTTACGACTCCGTGAGGAAGGAGCCCGTGCTGGAGGTCGACGCCGTTTACGTCGGCGAGGAGCCCCTCCACATAATTCT
GCCCGGGGGTGTGGAGCACCAGTTCCTAATGGGGTACCCGAAGGAGGCTAGCATATGGGACTCCGTGAGGAAGGTCGTAC
CCAAGGTTCACAAGGTGAGGCTGACGAGGGGAGGGGGAATGTGGCTTCACGCCGTCGTGAGCGTTGAGAAGAACGTCGAC
GGAGACGCGAAGAACGCCATAATGGCCGCGTTCGCCGGCCACCCCTCTTTGAAGCACGTAGTGGTTGTAGACCCGGACGT
GGACCCCGACGACCCTTACCAAGTGGAGTGGGCCATAGCGACGCGGTTCCAAGCCCACGAGGACTTAATAGTGATAAAGA
ACGCCCGGGGCTCCTCCTTGGACCCGAGCTCACAAGACGGCTTGACTAGCAAGATGGGGCTCGACGCCACCGCCCCCCTC
AAGTCCAAAGATAAGTTTAAGAGGGTAGGAAACATCTAA

Upstream 100 bases:

>100_bases
TCTACGAGAAGGACTCAGTTGAATTCTACGAGTCCTTGGGCCTCGGGACGCTCGCCAGACACGCAAAAGTCCCCCTGCCC
CGAGGGGTTAGGGGGCGAAG

Downstream 100 bases:

>100_bases
CGCACCCCTCCAAACAGTCCTTTGAGATTACCTCTTCTACCAATACCCCTTCCCTCAGCGTGAAGACGCGGTCGCAGAAG
CCCAAGGCCACGGGGTCGTG

Product: UbiD family decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MRLSELAEALGAERIGEVPRERVKEVLEKYERLGKPVIYKVEGWEPEVVSALYSSREAVWKALNAGSDEEAYEKLLHYKK
GTMEIVPFSYRKVDSLDYLPWVKFYPEDGGAYHTASVYVACLDDVCNASYHRTMYLGPRKAALRMVPRHLYKMYKEALER
GEELKVAVVIGAPSEVEFAAALSLPFGEFELEVAASLAGSLEVSKTPLYSLPVPARAGAVIEGRITAERVDEGPFVDLLH
TYDSVRKEPVLEVDAVYVGEEPLHIILPGGVEHQFLMGYPKEASIWDSVRKVVPKVHKVRLTRGGGMWLHAVVSVEKNVD
GDAKNAIMAAFAGHPSLKHVVVVDPDVDPDDPYQVEWAIATRFQAHEDLIVIKNARGSSLDPSSQDGLTSKMGLDATAPL
KSKDKFKRVGNI

Sequences:

>Translated_412_residues
MRLSELAEALGAERIGEVPRERVKEVLEKYERLGKPVIYKVEGWEPEVVSALYSSREAVWKALNAGSDEEAYEKLLHYKK
GTMEIVPFSYRKVDSLDYLPWVKFYPEDGGAYHTASVYVACLDDVCNASYHRTMYLGPRKAALRMVPRHLYKMYKEALER
GEELKVAVVIGAPSEVEFAAALSLPFGEFELEVAASLAGSLEVSKTPLYSLPVPARAGAVIEGRITAERVDEGPFVDLLH
TYDSVRKEPVLEVDAVYVGEEPLHIILPGGVEHQFLMGYPKEASIWDSVRKVVPKVHKVRLTRGGGMWLHAVVSVEKNVD
GDAKNAIMAAFAGHPSLKHVVVVDPDVDPDDPYQVEWAIATRFQAHEDLIVIKNARGSSLDPSSQDGLTSKMGLDATAPL
KSKDKFKRVGNI
>Mature_412_residues
MRLSELAEALGAERIGEVPRERVKEVLEKYERLGKPVIYKVEGWEPEVVSALYSSREAVWKALNAGSDEEAYEKLLHYKK
GTMEIVPFSYRKVDSLDYLPWVKFYPEDGGAYHTASVYVACLDDVCNASYHRTMYLGPRKAALRMVPRHLYKMYKEALER
GEELKVAVVIGAPSEVEFAAALSLPFGEFELEVAASLAGSLEVSKTPLYSLPVPARAGAVIEGRITAERVDEGPFVDLLH
TYDSVRKEPVLEVDAVYVGEEPLHIILPGGVEHQFLMGYPKEASIWDSVRKVVPKVHKVRLTRGGGMWLHAVVSVEKNVD
GDAKNAIMAAFAGHPSLKHVVVVDPDVDPDDPYQVEWAIATRFQAHEDLIVIKNARGSSLDPSSQDGLTSKMGLDATAPL
KSKDKFKRVGNI

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=315, Percent_Identity=29.2063492063492, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 45688; Mature: 45688

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSELAEALGAERIGEVPRERVKEVLEKYERLGKPVIYKVEGWEPEVVSALYSSREAVW
CCHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH
KALNAGSDEEAYEKLLHYKKGTMEIVPFSYRKVDSLDYLPWVKFYPEDGGAYHTASVYVA
HHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEHHHHHHH
CLDDVCNASYHRTMYLGPRKAALRMVPRHLYKMYKEALERGEELKVAVVIGAPSEVEFAA
HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEE
ALSLPFGEFELEVAASLAGSLEVSKTPLYSLPVPARAGAVIEGRITAERVDEGPFVDLLH
EEECCCCHHHHHHHHHHHCCCEECCCCCEECCCCCCCCCEEECCEEHHHCCCCCHHHHHH
TYDSVRKEPVLEVDAVYVGEEPLHIILPGGVEHQFLMGYPKEASIWDSVRKVVPKVHKVR
HHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHEEE
LTRGGGMWLHAVVSVEKNVDGDAKNAIMAAFAGHPSLKHVVVVDPDVDPDDPYQVEWAIA
EECCCCEEEEEEEEHHCCCCCCHHHHEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEE
TRFQAHEDLIVIKNARGSSLDPSSQDGLTSKMGLDATAPLKSKDKFKRVGNI
EECCCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MRLSELAEALGAERIGEVPRERVKEVLEKYERLGKPVIYKVEGWEPEVVSALYSSREAVW
CCHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH
KALNAGSDEEAYEKLLHYKKGTMEIVPFSYRKVDSLDYLPWVKFYPEDGGAYHTASVYVA
HHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEHHHHHHH
CLDDVCNASYHRTMYLGPRKAALRMVPRHLYKMYKEALERGEELKVAVVIGAPSEVEFAA
HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEE
ALSLPFGEFELEVAASLAGSLEVSKTPLYSLPVPARAGAVIEGRITAERVDEGPFVDLLH
EEECCCCHHHHHHHHHHHCCCEECCCCCEECCCCCCCCCEEECCEEHHHCCCCCHHHHHH
TYDSVRKEPVLEVDAVYVGEEPLHIILPGGVEHQFLMGYPKEASIWDSVRKVVPKVHKVR
HHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHEEE
LTRGGGMWLHAVVSVEKNVDGDAKNAIMAAFAGHPSLKHVVVVDPDVDPDDPYQVEWAIA
EECCCCEEEEEEEEHHCCCCCCHHHHEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEE
TRFQAHEDLIVIKNARGSSLDPSSQDGLTSKMGLDATAPLKSKDKFKRVGNI
EECCCCCCEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]