| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937334
Identifier: 156937334
GI number: 156937334
Start: 484832
End: 486262
Strand: Direct
Name: 156937334
Synonym: Igni_0541
Alternate gene names: NA
Gene position: 484832-486262 (Clockwise)
Preceding gene: 156937331
Following gene: 156937342
Centisome position: 37.37
GC content: 55.28
Gene sequence:
>1431_bases ATGTCGCTCAGCTTGAACGAGCTGTGGAACGTCGACTTGCGGAAGAGGGTCAACTCGCTCTCGGTCTCCGAGGACGGCAA GGTGCTGGCGGCGTGTGACGACGGCTGCGCCTACCTGATAGAGAACGGAAGAGTACTCAAGAAGGAGTGCGAGAGGGGCT CCTCCGCTGCGACCCACTACAAGGACGGCTTATTTGCGGTCGCCTACAAGAACGGCGTCCTCAAGATATTGACCCCCGAT GGGAGTATAAAGGCCGAGATAAAGGTGGGAAGGTACAACGAGGCAATAGCCATAATAAACGACAAAAGCGTGGTGGCTTG TTCCGACGCGTGCGTGAAGTTCAATTTCGACGGAGAGAGGGGGTGGCACTACGACATAGGGGGCGTAGGTAAGAACGTCG ACGTGGAGAACAACACGATCTACGTCCCCGACCACATATGGAGAAAGGTGCACGAAGTAGACGCGATAAGCGGGAAGGGG GAGGAGTTCTGCTCGTGCAAGGAGAAGGTCTACAGCGTGGACCGAGAGGGCGACCTCACGGCCGTCGGGACCACGAAGTC GTTGATAGTGTTTAGGGGTAGAGAAAAGGTGTGGGAAAGGGAAGTTGGGACGCACGTAACGCTAGTGAGGGTAGTAGGTG ACATTATATTTGCTTCAAATATGGGCTCCCAGAGCCTAAGGGCTTACGACATAAACGGCGCCGAGGCGTTGAACATAGAG CTCGAGGGGAGGCCAACGGCGCTGGACGCCAGGGGCAAGTACTTGGCCGTGGGCTTCTTCGACGGGAAGGTGAAGGTCTA CCAGCTCCCCACGGAAACCGAAGAGGAAAGGGCGGAAGAGGCAGAGGTAAAAGAGGTAGAGGAAGCGAAGGAAGAGGTCA AGGAGACCCTCCCGGGGCTGGGTGAGATCAAAAGCGTAGCGGAGGGCTCTTACATGGGTACTCCCTTAGCGAAGGAGATA CTTGAAGAAATAGAGAACATCACGGAGACCATGGAAGGAGCCAAGAACGCGGGCGACCTCATAGCTTCCGTAATAGCGAG GGTTGAGAAACTAACATCCGTCGCCTCCTCGGACTGGAAGCAAGTCTACGCGAACTACGAAGAGGCGGAGAGGTTGTTGG AAGATACCTTAAACGTGATAAACGAGGTAAAGGAGAGGATCGGAGAGGTTGAGAGCTGTCCCCCGCCGGAAAAGCTAATA GAAATACTGAAGATGAAGAGTCCAAAGGAGTTCACCGCCGCGCTGGCCGAGCTAGCGGAGGGCGGGGAGGTGGCGGAGAG GGTCAAGAAGGGCGTACAGCTGTTGAAGAGGTGCTTAGAGAGGTACTACTTGTTGCCGAGCTCGGAGGAGGTGCAGAAGC TCGAGGCGAAGTTGAAGGAAGTGAAAGAAGAAAAAGAAGCGATAAAAGCGTTGATTGAGAGCGGCCTCTAG
Upstream 100 bases:
>100_bases CGCGCTCCCGCCGGCGTAGGCGAACGGCAACTCGCTCTCCAGCACATATAAAACGTTCAGTTAAATAGCTAGGTCCCGGC GCTTTTGGCGGGACTTCGGA
Downstream 100 bases:
>100_bases CGGTCCATCTCCGCGACACACGTGTCGAGAGATATGTAGAACGCTAGGAAGTCTTGTAAGAGAAGTCCCTTCCCTAGGTA CTTCAAGCTCATCGTGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSLSLNELWNVDLRKRVNSLSVSEDGKVLAACDDGCAYLIENGRVLKKECERGSSAATHYKDGLFAVAYKNGVLKILTPD GSIKAEIKVGRYNEAIAIINDKSVVACSDACVKFNFDGERGWHYDIGGVGKNVDVENNTIYVPDHIWRKVHEVDAISGKG EEFCSCKEKVYSVDREGDLTAVGTTKSLIVFRGREKVWEREVGTHVTLVRVVGDIIFASNMGSQSLRAYDINGAEALNIE LEGRPTALDARGKYLAVGFFDGKVKVYQLPTETEEERAEEAEVKEVEEAKEEVKETLPGLGEIKSVAEGSYMGTPLAKEI LEEIENITETMEGAKNAGDLIASVIARVEKLTSVASSDWKQVYANYEEAERLLEDTLNVINEVKERIGEVESCPPPEKLI EILKMKSPKEFTAALAELAEGGEVAERVKKGVQLLKRCLERYYLLPSSEEVQKLEAKLKEVKEEKEAIKALIESGL
Sequences:
>Translated_476_residues MSLSLNELWNVDLRKRVNSLSVSEDGKVLAACDDGCAYLIENGRVLKKECERGSSAATHYKDGLFAVAYKNGVLKILTPD GSIKAEIKVGRYNEAIAIINDKSVVACSDACVKFNFDGERGWHYDIGGVGKNVDVENNTIYVPDHIWRKVHEVDAISGKG EEFCSCKEKVYSVDREGDLTAVGTTKSLIVFRGREKVWEREVGTHVTLVRVVGDIIFASNMGSQSLRAYDINGAEALNIE LEGRPTALDARGKYLAVGFFDGKVKVYQLPTETEEERAEEAEVKEVEEAKEEVKETLPGLGEIKSVAEGSYMGTPLAKEI LEEIENITETMEGAKNAGDLIASVIARVEKLTSVASSDWKQVYANYEEAERLLEDTLNVINEVKERIGEVESCPPPEKLI EILKMKSPKEFTAALAELAEGGEVAERVKKGVQLLKRCLERYYLLPSSEEVQKLEAKLKEVKEEKEAIKALIESGL >Mature_475_residues SLSLNELWNVDLRKRVNSLSVSEDGKVLAACDDGCAYLIENGRVLKKECERGSSAATHYKDGLFAVAYKNGVLKILTPDG SIKAEIKVGRYNEAIAIINDKSVVACSDACVKFNFDGERGWHYDIGGVGKNVDVENNTIYVPDHIWRKVHEVDAISGKGE EFCSCKEKVYSVDREGDLTAVGTTKSLIVFRGREKVWEREVGTHVTLVRVVGDIIFASNMGSQSLRAYDINGAEALNIEL EGRPTALDARGKYLAVGFFDGKVKVYQLPTETEEERAEEAEVKEVEEAKEEVKETLPGLGEIKSVAEGSYMGTPLAKEIL EEIENITETMEGAKNAGDLIASVIARVEKLTSVASSDWKQVYANYEEAERLLEDTLNVINEVKERIGEVESCPPPEKLIE ILKMKSPKEFTAALAELAEGGEVAERVKKGVQLLKRCLERYYLLPSSEEVQKLEAKLKEVKEEKEAIKALIESGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52634; Mature: 52503
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSLNELWNVDLRKRVNSLSVSEDGKVLAACDDGCAYLIENGRVLKKECERGSSAATHY CCCCHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCHHHHHHCCCCCCCHHH KDGLFAVAYKNGVLKILTPDGSIKAEIKVGRYNEAIAIINDKSVVACSDACVKFNFDGER CCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEECCCEEEEECCCCC GWHYDIGGVGKNVDVENNTIYVPDHIWRKVHEVDAISGKGEEFCSCKEKVYSVDREGDLT CCEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEE AVGTTKSLIVFRGREKVWEREVGTHVTLVRVVGDIIFASNMGSQSLRAYDINGAEALNIE EECCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEE LEGRPTALDARGKYLAVGFFDGKVKVYQLPTETEEERAEEAEVKEVEEAKEEVKETLPGL ECCCCCEECCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH GEIKSVAEGSYMGTPLAKEILEEIENITETMEGAKNAGDLIASVIARVEKLTSVASSDWK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QVYANYEEAERLLEDTLNVINEVKERIGEVESCPPPEKLIEILKMKSPKEFTAALAELAE HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC GGEVAERVKKGVQLLKRCLERYYLLPSSEEVQKLEAKLKEVKEEKEAIKALIESGL CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLSLNELWNVDLRKRVNSLSVSEDGKVLAACDDGCAYLIENGRVLKKECERGSSAATHY CCCHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCHHHHHHCCCCCCCHHH KDGLFAVAYKNGVLKILTPDGSIKAEIKVGRYNEAIAIINDKSVVACSDACVKFNFDGER CCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEECCCEEEEECCCCC GWHYDIGGVGKNVDVENNTIYVPDHIWRKVHEVDAISGKGEEFCSCKEKVYSVDREGDLT CCEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEE AVGTTKSLIVFRGREKVWEREVGTHVTLVRVVGDIIFASNMGSQSLRAYDINGAEALNIE EECCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEE LEGRPTALDARGKYLAVGFFDGKVKVYQLPTETEEERAEEAEVKEVEEAKEEVKETLPGL ECCCCCEECCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH GEIKSVAEGSYMGTPLAKEILEEIENITETMEGAKNAGDLIASVIARVEKLTSVASSDWK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QVYANYEEAERLLEDTLNVINEVKERIGEVESCPPPEKLIEILKMKSPKEFTAALAELAE HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC GGEVAERVKKGVQLLKRCLERYYLLPSSEEVQKLEAKLKEVKEEKEAIKALIESGL CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA