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The map label for this gene is ydaO [C]

Identifier: 156937300

GI number: 156937300

Start: 448145

End: 449059

Strand: Direct

Name: ydaO [C]

Synonym: Igni_0506

Alternate gene names: 156937300

Gene position: 448145-449059 (Clockwise)

Preceding gene: 156937299

Following gene: 156937302

Centisome position: 34.54

GC content: 59.78

Gene sequence:

>915_bases
ATGAGGTGTGCAGTCTGCGGAAAGAGGGTCGTGGCCAAGGACTACTCCGGGAGGCCGCTCTGCGAGGAACACTTCTTACA
GAGCGTGGTGGAGAGGGCAGAGAAGGAGCTGGAGGGGGTAAACTCTAAGATTTTGCTCGCGGTCTCCGGCGGGAAGGACT
CGTTAGTACTCATGGACGTGGTCGCCCAGCTGCGGGACCCGAAGGACTTGGTGGCGGCCACCGTGGTGGAAGGGGCCCCA
GGAGGGTACAGAGTTAAGGAAGCTCAAGTCGCCAAAAGGTTCGCAGAAAAGCTCGGAATAAAACACATTACAATTACGTT
TAAGGAGCTGTTCGGGAAGAGCTTAGAGGAGATGGTTGCCAAAGGGAAGCTCAGTCCTTGCACTTACTGCGGCGTCTTCC
GCAGGAGGGCGCTGGAGGTCCTCGCTAGGAGGTTGGGCGCCGTGGTGGCGACCGGCCACACCTTGGACGACGAGGCCCAC
ACGGCCCTCTTGAATTTGTTGAGGGGCTCTTGGGACGACCTCTTGAGGCTGAACGCCAAGAGCAGGATAAAACCGCTAAG
AAAGGTCTACGAGAGGGAGGTGTCTATATACGCGTACATAAAGAAGTTCCCCTTCCAGAGCGAGGAGTGTCCGTACATAG
TTAGGAGGCCCTCCCTGAGGGGGAGGCTGAGGGAGGAGCTCTTCGAGTACGAGAGGGAGAGGCCGGGGACGCTCTTCAAG
TGGAGGGAGAGGTTCGAGGGGCTCGGGGAGCCGAAGAGGCGCTTCAAGCTCTGCGAGCGCTGCGGCTTCCCGACCTCCCC
GAACCGGAGGGTCTGCAAGGTCTGCGAGCTGGCAGAGGAGGTGGGGGCCTCAGTGCCCAGACTCGAGGAGCATCTCCAAG
TAGGTCTTCTCGACGACCTCGGCGTCCGGGAATAG

Upstream 100 bases:

>100_bases
TAACTATAGAGGGTAACGACATAGACTTCGACAAGGTAGTAGACGTCCTCGAGAGGTTAGGGGTGGTGATCCACTCGATA
GACGAGGCCGAGGCCGAGCC

Downstream 100 bases:

>100_bases
GGACGCAAGCTCCTTGAGCTCCTCCGGCCCGGCCCCCTCCGACTCTATCTCTACGAAGTAGCCGAGGCCCTCCACGTAGT
CCAGAGTTATTGTGGCGCCC

Product: PP-loop domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRCAVCGKRVVAKDYSGRPLCEEHFLQSVVERAEKELEGVNSKILLAVSGGKDSLVLMDVVAQLRDPKDLVAATVVEGAP
GGYRVKEAQVAKRFAEKLGIKHITITFKELFGKSLEEMVAKGKLSPCTYCGVFRRRALEVLARRLGAVVATGHTLDDEAH
TALLNLLRGSWDDLLRLNAKSRIKPLRKVYEREVSIYAYIKKFPFQSEECPYIVRRPSLRGRLREELFEYERERPGTLFK
WRERFEGLGEPKRRFKLCERCGFPTSPNRRVCKVCELAEEVGASVPRLEEHLQVGLLDDLGVRE

Sequences:

>Translated_304_residues
MRCAVCGKRVVAKDYSGRPLCEEHFLQSVVERAEKELEGVNSKILLAVSGGKDSLVLMDVVAQLRDPKDLVAATVVEGAP
GGYRVKEAQVAKRFAEKLGIKHITITFKELFGKSLEEMVAKGKLSPCTYCGVFRRRALEVLARRLGAVVATGHTLDDEAH
TALLNLLRGSWDDLLRLNAKSRIKPLRKVYEREVSIYAYIKKFPFQSEECPYIVRRPSLRGRLREELFEYERERPGTLFK
WRERFEGLGEPKRRFKLCERCGFPTSPNRRVCKVCELAEEVGASVPRLEEHLQVGLLDDLGVRE
>Mature_304_residues
MRCAVCGKRVVAKDYSGRPLCEEHFLQSVVERAEKELEGVNSKILLAVSGGKDSLVLMDVVAQLRDPKDLVAATVVEGAP
GGYRVKEAQVAKRFAEKLGIKHITITFKELFGKSLEEMVAKGKLSPCTYCGVFRRRALEVLARRLGAVVATGHTLDDEAH
TALLNLLRGSWDDLLRLNAKSRIKPLRKVYEREVSIYAYIKKFPFQSEECPYIVRRPSLRGRLREELFEYERERPGTLFK
WRERFEGLGEPKRRFKLCERCGFPTSPNRRVCKVCELAEEVGASVPRLEEHLQVGLLDDLGVRE

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=315, Percent_Identity=32.3809523809524, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1787606, Length=213, Percent_Identity=28.169014084507, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17540090, Length=305, Percent_Identity=31.8032786885246, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24651972, Length=310, Percent_Identity=32.9032258064516, Blast_Score=136, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 34534; Mature: 34534

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCAVCGKRVVAKDYSGRPLCEEHFLQSVVERAEKELEGVNSKILLAVSGGKDSLVLMDV
CCCCHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
VAQLRDPKDLVAATVVEGAPGGYRVKEAQVAKRFAEKLGIKHITITFKELFGKSLEEMVA
HHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH
KGKLSPCTYCGVFRRRALEVLARRLGAVVATGHTLDDEAHTALLNLLRGSWDDLLRLNAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCH
SRIKPLRKVYEREVSIYAYIKKFPFQSEECPYIVRRPSLRGRLREELFEYERERPGTLFK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHH
WRERFEGLGEPKRRFKLCERCGFPTSPNRRVCKVCELAEEVGASVPRLEEHLQVGLLDDL
HHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCC
GVRE
CCCC
>Mature Secondary Structure
MRCAVCGKRVVAKDYSGRPLCEEHFLQSVVERAEKELEGVNSKILLAVSGGKDSLVLMDV
CCCCHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
VAQLRDPKDLVAATVVEGAPGGYRVKEAQVAKRFAEKLGIKHITITFKELFGKSLEEMVA
HHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH
KGKLSPCTYCGVFRRRALEVLARRLGAVVATGHTLDDEAHTALLNLLRGSWDDLLRLNAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCH
SRIKPLRKVYEREVSIYAYIKKFPFQSEECPYIVRRPSLRGRLREELFEYERERPGTLFK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHH
WRERFEGLGEPKRRFKLCERCGFPTSPNRRVCKVCELAEEVGASVPRLEEHLQVGLLDDL
HHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCC
GVRE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]