| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937255
Identifier: 156937255
GI number: 156937255
Start: 406562
End: 407170
Strand: Direct
Name: 156937255
Synonym: Igni_0461
Alternate gene names: NA
Gene position: 406562-407170 (Clockwise)
Preceding gene: 156937254
Following gene: 156937256
Centisome position: 31.33
GC content: 57.14
Gene sequence:
>609_bases ATGAGCCGGGCTGAGCGCCTCTCACCCGTGCACTTGGCGTTGGACCACATCATAAAGATAAACGAACTGTGGAGGGCCAT CGTAGCTTCAGAGGAGATGAAGGAGAAGAACCTAGAGGGGTTCGTCCGGAGAGCTAGGCAGTACCCCTCCCTATTGGCCG CCTCAGGGCTGGTGCCCTCCGTAACGTTCTTCCTCTCCAAAATCATAGACAAGGACAACCCGGACGAGGCCCTGAGGCTC CTCGTGGAATACTTGACGGCTGAGGACGAGGACAAGGCGAAGGAGATAATGAATAAAATGAGGAGCGAGGCGGAAGCGCT CAACGCTTTGAAGGAGGACGCGGGAAAGAAGGAGTCAGAGGGCTACTTGTGGTTCACCGGGGCCTTGCTGGCAGCGCTCT TCGCGTTCTCCGAAGCCGTGGGAATAAAGGTGCAACTGTCGGACGAGGAACGATTCGTACACGAGGTGGCGACCTTCCTG AGGGGCCTTCAAGAAGGCCGGAAGGAGGCCCTCGTCTTAGAGAGGCTTTTGTTAGAATACTCTTCGGAGTTGAAGAACTT GGCTGCGGCTTACGCGGGAGCCGTCTGGGGTGCTAAGGGTGAGGGCTGA
Upstream 100 bases:
>100_bases CGTCTCTTGGGCTTGGAAGGTCCCAAGTCGTTAGTCTTGGGCGGGAAGGAGACCGTCGGCAAGGGGCTGGTAAGGATAAC GTTGGCTTGAGGTGATAGGG
Downstream 100 bases:
>100_bases CCTAAAGGCAATTAAAAAATACGTGGACGAGGTACTGAAAGGAGTCACGCAGGAGAACATGAAGGTCTTGAAGAGGGCCG TGCTGGACGAGCTCCTCAAA
Product: CRISPR-associated Cmr5 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSRAERLSPVHLALDHIIKINELWRAIVASEEMKEKNLEGFVRRARQYPSLLAASGLVPSVTFFLSKIIDKDNPDEALRL LVEYLTAEDEDKAKEIMNKMRSEAEALNALKEDAGKKESEGYLWFTGALLAALFAFSEAVGIKVQLSDEERFVHEVATFL RGLQEGRKEALVLERLLLEYSSELKNLAAAYAGAVWGAKGEG
Sequences:
>Translated_202_residues MSRAERLSPVHLALDHIIKINELWRAIVASEEMKEKNLEGFVRRARQYPSLLAASGLVPSVTFFLSKIIDKDNPDEALRL LVEYLTAEDEDKAKEIMNKMRSEAEALNALKEDAGKKESEGYLWFTGALLAALFAFSEAVGIKVQLSDEERFVHEVATFL RGLQEGRKEALVLERLLLEYSSELKNLAAAYAGAVWGAKGEG >Mature_201_residues SRAERLSPVHLALDHIIKINELWRAIVASEEMKEKNLEGFVRRARQYPSLLAASGLVPSVTFFLSKIIDKDNPDEALRLL VEYLTAEDEDKAKEIMNKMRSEAEALNALKEDAGKKESEGYLWFTGALLAALFAFSEAVGIKVQLSDEERFVHEVATFLR GLQEGRKEALVLERLLLEYSSELKNLAAAYAGAVWGAKGEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22555; Mature: 22424
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAERLSPVHLALDHIIKINELWRAIVASEEMKEKNLEGFVRRARQYPSLLAASGLVPS CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VTFFLSKIIDKDNPDEALRLLVEYLTAEDEDKAKEIMNKMRSEAEALNALKEDAGKKESE HHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GYLWFTGALLAALFAFSEAVGIKVQLSDEERFVHEVATFLRGLQEGRKEALVLERLLLEY CEEEHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSELKNLAAAYAGAVWGAKGEG HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRAERLSPVHLALDHIIKINELWRAIVASEEMKEKNLEGFVRRARQYPSLLAASGLVPS CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VTFFLSKIIDKDNPDEALRLLVEYLTAEDEDKAKEIMNKMRSEAEALNALKEDAGKKESE HHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GYLWFTGALLAALFAFSEAVGIKVQLSDEERFVHEVATFLRGLQEGRKEALVLERLLLEY CEEEHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSELKNLAAAYAGAVWGAKGEG HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA