| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937237
Identifier: 156937237
GI number: 156937237
Start: 393910
End: 394365
Strand: Direct
Name: 156937237
Synonym: Igni_0443
Alternate gene names: NA
Gene position: 393910-394365 (Clockwise)
Preceding gene: 156937236
Following gene: 156937239
Centisome position: 30.36
GC content: 62.94
Gene sequence:
>456_bases TTGGACTGCCTCGCTTGCGTCGCCTTGTCGGCCTTGCCGGCCGTGGAGGTTCGCGGCTCCGTCCCTTGCTTGGCGCTCGC CGGCTGCGGGGCCCACTACGCGGCCTTGAGCTACTTGCTCAGCTCCTCCACCGGGGCCCTCGTTTATCTATTGTTGGAGA AGCTGTTCCCGTTGGTGGAGGAGTTCTTGAAGGGGAGGTGGGAGCTCGGGGCCAAACTATTGGAGAAGGTCGTGGAGAGG ACCAAAAAGAAGGCGAGCAAGAAGGTAGAGGAGATGGGTACGTTGGGGTTGGCCGCGTTCGTAGCGCTCCCCGTGCCGGG GACCGGGGTGTGGACCGGGGCCCTCGCGGGCTACCTCTTGGGGCTGAAAAGGAGGGACGTGGTGCTGGCGCTCTTCGCGG GAAACGCGGTAACTACCGCGATAATGAGCTTGAGCTACTTGCTTCAGTCGCCGTAA
Upstream 100 bases:
>100_bases TGAGGTGTTTTCGGGGTGCCCGAGGGGCTCCGATGAGGAAGCGGTTACCCCACCGAGGCCTTTTGGGGGAGGCCCGGGGC TCGGGGGTAGGAAGGGAGCC
Downstream 100 bases:
>100_bases ATGGACTCCAGTATTTTACCCGCTATCCTGACCACGTCTATGGTGGTTATTACAGCGTACGGCTCCTCGTTTTCGTTCAA GACCACCAGCTCCTCCTCCT
Product: membrane protein-like protein
Products: NA
Alternate protein names: Small Multidrug Export Protein; Small Multi-Drug Export Protein; Small Multi-Drug Exporter; Small Multidrug Export Related Protein
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MDCLACVALSALPAVEVRGSVPCLALAGCGAHYAALSYLLSSSTGALVYLLLEKLFPLVEEFLKGRWELGAKLLEKVVER TKKKASKKVEEMGTLGLAAFVALPVPGTGVWTGALAGYLLGLKRRDVVLALFAGNAVTTAIMSLSYLLQSP
Sequences:
>Translated_151_residues MDCLACVALSALPAVEVRGSVPCLALAGCGAHYAALSYLLSSSTGALVYLLLEKLFPLVEEFLKGRWELGAKLLEKVVER TKKKASKKVEEMGTLGLAAFVALPVPGTGVWTGALAGYLLGLKRRDVVLALFAGNAVTTAIMSLSYLLQSP >Mature_151_residues MDCLACVALSALPAVEVRGSVPCLALAGCGAHYAALSYLLSSSTGALVYLLLEKLFPLVEEFLKGRWELGAKLLEKVVER TKKKASKKVEEMGTLGLAAFVALPVPGTGVWTGALAGYLLGLKRRDVVLALFAGNAVTTAIMSLSYLLQSP
Specific function: Unknown
COG id: COG2426
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15883; Mature: 15883
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCLACVALSALPAVEVRGSVPCLALAGCGAHYAALSYLLSSSTGALVYLLLEKLFPLVE CHHHHHHHHHHCCHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EFLKGRWELGAKLLEKVVERTKKKASKKVEEMGTLGLAAFVALPVPGTGVWTGALAGYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GLKRRDVVLALFAGNAVTTAIMSLSYLLQSP CCCCCCEEEEEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDCLACVALSALPAVEVRGSVPCLALAGCGAHYAALSYLLSSSTGALVYLLLEKLFPLVE CHHHHHHHHHHCCHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EFLKGRWELGAKLLEKVVERTKKKASKKVEEMGTLGLAAFVALPVPGTGVWTGALAGYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH GLKRRDVVLALFAGNAVTTAIMSLSYLLQSP CCCCCCEEEEEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA