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The map label for this gene is 156937163

Identifier: 156937163

GI number: 156937163

Start: 322627

End: 323802

Strand: Direct

Name: 156937163

Synonym: Igni_0369

Alternate gene names: NA

Gene position: 322627-323802 (Clockwise)

Preceding gene: 156937162

Following gene: 156937165

Centisome position: 24.86

GC content: 55.95

Gene sequence:

>1176_bases
GTGGAGGGAGGCAAGTACTTGGAGGTCACCGGGCCGGCAGCGGTGAGGTTAGTAAGGGGCAGCGCGGTCCTAATGGGGAA
GACGTTAGAGGAGAACGACGTCATAGTGGTTCCCCAGTGGAGGACTTACGCGTTCAAGGCTATAAAGGACTCCGAGCTGG
ACGTTTCAATTACATCGACGACGAAGGTAGAAATTAAGGACAAGAACGTTATGGACGAGTGGGTAAAGGGGCTCTCGAAG
ATCGTGGGAGCGAAGAGGGTTGTGATACTGGGCCCCACGGACTCCGGGAAGAGCAGCGCGACTGCAACCTTAGTTAACAT
GAATTTGAACGAGGGCTACGAGGTCAGCGTGGTGGACAGCGACGTTGGCCAGAGCAACTTGTGCTTCCCCACTATGGTGT
GCAAGGCGAAGGTCAAGGGTTACGTCTTCACGTTGAGCGACTTGGAGGCCGAGGAGCAACGCTTTACCGGCACCATAACC
CCGGCGGTGGAGAAGAGCCGGATAATCTCCTCCGTCTCTTCCCTCTCCAAGGGGAGGGTAATAGTTGACACCGACGGGTG
GGTGGACGGCTTCGAGGCCGGCTGCTACAAGCACGAGCTCCTCCGGGCGGTCTCGCCGGAGGTCGTTGTTTACATGGGTA
AGGCCCCCTGGTGGGCCAAGGGCCCTTGGGAGCTGGTGGAGCTTCCCCCCTCCACGGGCAAGGAGAGGAGTAGGAACGAC
AGGAGGAGCATAAGGAAAAATAAGTACAGGAAGGCCCTAGAGGGGTGCAAGACTAAGGACATAGACCTAACTAAGGTTAA
CGCACTCATGTCCGTTATATTCAACAACCCGTGGGGCGACGAGGTCCTTAAGGAGGGCGTGAAGGAGCTCATAGGGGTCA
AGCCGTTATTGGTGGTGCCTTGGGGCAACAAGGTAGTCGCCGTAATAAAGAGGGGCTTGAAGTACAAGAAAGTACCGAAC
GTCGAGGTGCTGGAGGAGGGCGAGGAGAGGGGGCTGTTGGTAGGCTTGGGGGACGGCTCCGGCAACGAGCGGCTGGGCGT
CGTGGTGAAGATAGACCACTTGAAGAAAGTTATGAAAGTAAAGACTTGTATGGAGGAAGAGCCCCTTTACGTTATATTCG
GGAGGGTCAAGCTCGAAGAGGACTACAGCGACAAGGTTGTAAAAAAGCCCTTTTAG

Upstream 100 bases:

>100_bases
TAGGAAGGGGGTGATCCTCCCCAAGAGGAGGGCACTCATTTCCTCCCCCGGCCTTCCAGCGAGGGGCTGAGGGCTGCTGC
TGGACCACAAGAGGCTCAAG

Downstream 100 bases:

>100_bases
CTACACTTGACGCAGTAAGGCCCGTTGACCAGCACGTGCCAGTTCGCCTTGTTTATCATTATTATGCTCGTGCCGTTCAG
TTCGCTGGGCTTGGTCAAAG

Product: GTPase or GTP-binding protein-like protein

Products: NA

Alternate protein names: Polynucleotide kinase PF0112 [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MEGGKYLEVTGPAAVRLVRGSAVLMGKTLEENDVIVVPQWRTYAFKAIKDSELDVSITSTTKVEIKDKNVMDEWVKGLSK
IVGAKRVVILGPTDSGKSSATATLVNMNLNEGYEVSVVDSDVGQSNLCFPTMVCKAKVKGYVFTLSDLEAEEQRFTGTIT
PAVEKSRIISSVSSLSKGRVIVDTDGWVDGFEAGCYKHELLRAVSPEVVVYMGKAPWWAKGPWELVELPPSTGKERSRND
RRSIRKNKYRKALEGCKTKDIDLTKVNALMSVIFNNPWGDEVLKEGVKELIGVKPLLVVPWGNKVVAVIKRGLKYKKVPN
VEVLEEGEERGLLVGLGDGSGNERLGVVVKIDHLKKVMKVKTCMEEEPLYVIFGRVKLEEDYSDKVVKKPF

Sequences:

>Translated_391_residues
MEGGKYLEVTGPAAVRLVRGSAVLMGKTLEENDVIVVPQWRTYAFKAIKDSELDVSITSTTKVEIKDKNVMDEWVKGLSK
IVGAKRVVILGPTDSGKSSATATLVNMNLNEGYEVSVVDSDVGQSNLCFPTMVCKAKVKGYVFTLSDLEAEEQRFTGTIT
PAVEKSRIISSVSSLSKGRVIVDTDGWVDGFEAGCYKHELLRAVSPEVVVYMGKAPWWAKGPWELVELPPSTGKERSRND
RRSIRKNKYRKALEGCKTKDIDLTKVNALMSVIFNNPWGDEVLKEGVKELIGVKPLLVVPWGNKVVAVIKRGLKYKKVPN
VEVLEEGEERGLLVGLGDGSGNERLGVVVKIDHLKKVMKVKTCMEEEPLYVIFGRVKLEEDYSDKVVKKPF
>Mature_391_residues
MEGGKYLEVTGPAAVRLVRGSAVLMGKTLEENDVIVVPQWRTYAFKAIKDSELDVSITSTTKVEIKDKNVMDEWVKGLSK
IVGAKRVVILGPTDSGKSSATATLVNMNLNEGYEVSVVDSDVGQSNLCFPTMVCKAKVKGYVFTLSDLEAEEQRFTGTIT
PAVEKSRIISSVSSLSKGRVIVDTDGWVDGFEAGCYKHELLRAVSPEVVVYMGKAPWWAKGPWELVELPPSTGKERSRND
RRSIRKNKYRKALEGCKTKDIDLTKVNALMSVIFNNPWGDEVLKEGVKELIGVKPLLVVPWGNKVVAVIKRGLKYKKVPN
VEVLEEGEERGLLVGLGDGSGNERLGVVVKIDHLKKVMKVKTCMEEEPLYVIFGRVKLEEDYSDKVVKKPF

Specific function: Polynucleotide kinase that can phosphorylate the 5'- hydroxyl groups of both single-stranded RNA (ssRNA) and single- stranded DNA (ssDNA). Exhibits a strong preference for ssRNA [H]

COG id: COG1341

COG function: function code R; Predicted GTPase or GTP-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010655 [H]

Pfam domain/function: PF06807 Clp1 [H]

EC number: =2.7.1.78 [H]

Molecular weight: Translated: 43266; Mature: 43266

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGGKYLEVTGPAAVRLVRGSAVLMGKTLEENDVIVVPQWRTYAFKAIKDSELDVSITST
CCCCCEEEEECCCEEEEEECCEEEEECEECCCCEEEEECCCCEEEEEECCCCCEEEEECE
TKVEIKDKNVMDEWVKGLSKIVGAKRVVILGPTDSGKSSATATLVNMNLNEGYEVSVVDS
EEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEC
DVGQSNLCFPTMVCKAKVKGYVFTLSDLEAEEQRFTGTITPAVEKSRIISSVSSLSKGRV
CCCCCCCCHHHHHHHHHHCEEEEEECCCCCHHHHCCEEECCHHHHHHHHHHHHHHCCCEE
IVDTDGWVDGFEAGCYKHELLRAVSPEVVVYMGKAPWWAKGPWELVELPPSTGKERSRND
EEECCCCCCCHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHH
RRSIRKNKYRKALEGCKTKDIDLTKVNALMSVIFNNPWGDEVLKEGVKELIGVKPLLVVP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE
WGNKVVAVIKRGLKYKKVPNVEVLEEGEERGLLVGLGDGSGNERLGVVVKIDHLKKVMKV
CCCHHHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHH
KTCMEEEPLYVIFGRVKLEEDYSDKVVKKPF
HHHHCCCCEEEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MEGGKYLEVTGPAAVRLVRGSAVLMGKTLEENDVIVVPQWRTYAFKAIKDSELDVSITST
CCCCCEEEEECCCEEEEEECCEEEEECEECCCCEEEEECCCCEEEEEECCCCCEEEEECE
TKVEIKDKNVMDEWVKGLSKIVGAKRVVILGPTDSGKSSATATLVNMNLNEGYEVSVVDS
EEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEC
DVGQSNLCFPTMVCKAKVKGYVFTLSDLEAEEQRFTGTITPAVEKSRIISSVSSLSKGRV
CCCCCCCCHHHHHHHHHHCEEEEEECCCCCHHHHCCEEECCHHHHHHHHHHHHHHCCCEE
IVDTDGWVDGFEAGCYKHELLRAVSPEVVVYMGKAPWWAKGPWELVELPPSTGKERSRND
EEECCCCCCCHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHH
RRSIRKNKYRKALEGCKTKDIDLTKVNALMSVIFNNPWGDEVLKEGVKELIGVKPLLVVP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE
WGNKVVAVIKRGLKYKKVPNVEVLEEGEERGLLVGLGDGSGNERLGVVVKIDHLKKVMKV
CCCHHHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHH
KTCMEEEPLYVIFGRVKLEEDYSDKVVKKPF
HHHHCCCCEEEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA