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The map label for this gene is yfhQ [C]

Identifier: 156936922

GI number: 156936922

Start: 114019

End: 114705

Strand: Direct

Name: yfhQ [C]

Synonym: Igni_0127

Alternate gene names: 156936922

Gene position: 114019-114705 (Clockwise)

Preceding gene: 156936921

Following gene: 156936925

Centisome position: 8.79

GC content: 55.9

Gene sequence:

>687_bases
GTGAAGGTCCGCCTCGTCTTGGTGGAGCCCGAAGGTAAGATAAATTTCGGATTCATATTGAGATTATGCAAAAACTTCGA
AGTGGATGAAATAGTAGCCGTGAGGCCAAAATTTGACGTACGCGACGAAGAGGTACTCACGTTTGCTGCGAACGGAAGGG
ATTACGTGGACAAGGTGAAGGTGGTAGACGACTACAAGGAAGCTCTGGAAGGCTTGGTAGTGTGTACGAGCGCCAAGGTC
TCCAGCGCTGATCCCCTCAGGGACTTCGTCTTGCCGTGGGAACTCAAGGAGAAGTTCGGCGAGCCCGAAAGGCTGACCTT
GGTCTTCGGTAGGGAGAGCGTGGGGCTGACGAGAGAGGAGCTGAAGGAGTGCGACGCGCTCCTCCACGTCCCGGCGTCCC
CCCAGTACCCGGTGATGAACTTGTCCCACGCGGTCGCGGTAGTCTTATGGGAGGTGTGGAAGCAATACAGAATAGAAAAA
GGGGCGCAGCCGGAGAGGCCGGACGAGAGGGACCTGAGGCTGGCCTTGGGAGTGGCGGAACGCCTAGCGAGGGCCTTGAT
AAAGGACGAAGCCAAGAGGGAAAGGGTAACAGTCGCGATAAAGAGGCTTCTGGCCAAGGCCACTAGACAAGAGCTGAGGA
ACTTGCTATACTTGTTGAGCAAGTGCGCTAACCGACTGGGCGAATGA

Upstream 100 bases:

>100_bases
GGGCGAGCTGCTGCTGGAGGCCGTAAAGAGGATACAGGCACACGTGGAGGAGGTCGTACAATAAACCCTTTTCAAAACCC
ACATCCGGGGTTCCGTCTGA

Downstream 100 bases:

>100_bases
AGGTTAAGAGGCCTTCCCTAACCATGGCTATCCCCAGCCCAGCCATCAGTATCGCCAGTATCCTGTTTAAGGCTAGGGTC
CCGTTCTTGCCTAGCAGCTT

Product: tRNA/rRNA methyltransferase (SpoU)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKVVDDYKEALEGLVVCTSAKV
SSADPLRDFVLPWELKEKFGEPERLTLVFGRESVGLTREELKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEK
GAQPERPDERDLRLALGVAERLARALIKDEAKRERVTVAIKRLLAKATRQELRNLLYLLSKCANRLGE

Sequences:

>Translated_228_residues
MKVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKVVDDYKEALEGLVVCTSAKV
SSADPLRDFVLPWELKEKFGEPERLTLVFGRESVGLTREELKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEK
GAQPERPDERDLRLALGVAERLARALIKDEAKRERVTVAIKRLLAKATRQELRNLLYLLSKCANRLGE
>Mature_228_residues
MKVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVKVVDDYKEALEGLVVCTSAKV
SSADPLRDFVLPWELKEKFGEPERLTLVFGRESVGLTREELKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEK
GAQPERPDERDLRLALGVAERLARALIKDEAKRERVTVAIKRLLAKATRQELRNLLYLLSKCANRLGE

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=245, Percent_Identity=32.6530612244898, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790865, Length=157, Percent_Identity=29.9363057324841, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 26071; Mature: 26071

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVK
CEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHH
VVDDYKEALEGLVVCTSAKVSSADPLRDFVLPWELKEKFGEPERLTLVFGRESVGLTREE
HHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCHHH
LKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEKGAQPERPDERDLRLALGVAE
HHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RLARALIKDEAKRERVTVAIKRLLAKATRQELRNLLYLLSKCANRLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVRLVLVEPEGKINFGFILRLCKNFEVDEIVAVRPKFDVRDEEVLTFAANGRDYVDKVK
CEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCHHHHHHHH
VVDDYKEALEGLVVCTSAKVSSADPLRDFVLPWELKEKFGEPERLTLVFGRESVGLTREE
HHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCHHH
LKECDALLHVPASPQYPVMNLSHAVAVVLWEVWKQYRIEKGAQPERPDERDLRLALGVAE
HHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RLARALIKDEAKRERVTVAIKRLLAKATRQELRNLLYLLSKCANRLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]