| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936811
Identifier: 156936811
GI number: 156936811
Start: 14447
End: 16678
Strand: Direct
Name: 156936811
Synonym: Igni_0016
Alternate gene names: NA
Gene position: 14447-16678 (Clockwise)
Preceding gene: 156936807
Following gene: 156936812
Centisome position: 1.11
GC content: 51.08
Gene sequence:
>2232_bases TTGAAATATATCTTAAAGGAACACAAGAAAACAGTCGTTCTGATAGTAACCATCTTGATCATAGCATCATCCTTCTATGT TAGGCTGATTCCGTACTTCAAGTATTCTCGTTATGGCATCTGGCTTCAGTACGACGACAGCATGTTCGAGTATTGGCTTT CCAAAACTCTTTACGAAAAGGGAGTTGGTTACTGGTACCAACTGACGCCCGAGAACACTAGACACTTGTGGTGGTGGCCG GAGGGAAGGGACGTTAGGAGGACCGAAACCCCGGGGTTGTCCTTCACGGGGGCGCTCTTATATCCCGTGGCGAAGGCTTT CAACTTAAGGCTAGTGGACTGGGTGGGGATAATCCCGGCCTTCTACGGCACGTTAGCTACGGCCGCGTCGGCCCTCTTGG GCTACACCATAGGGGGTCCAGCGCTCGCCGTTTTGATGGCGACGTCGACGGGATATCAATACGCCTTCATGCAGAGGAGC ATTTCGAGTTTCGTAGAGAAGATGGCGCCGTGTATGTTCTTTGGAACGCTCTTCTTAGTGACTCTGGCGCTCTTGTTGAA GAGGTCTAACCTCGACGTACCCGCAGCGGCGCTCCTCGGAGCCCTCGGGGGAGGCGCTCTAATGCTCGCTTCGGCCTTCT GGGGCGGCTTCCTAGCGTTCTTGGCGGTTACTCTGATCTTCTCGATGCTAGTATTGTTCTTCACGGACAACGAAGCCGTT CTCAAAAACCTCATCATATTCTTAGCCGCGTCCACAATAACTTTCCTAGTCACCTCGAAATGGATAACAACTATTTGGAT GCACAAGACTTGGGCCTTCACACTGCTTCTCTACTCGCTCTCAATGGTTTTCGCGGCGGCAGAGCTTTTGGTGCTGAAGA AGTTCGACGAGGAGAAGAGGCTTAAGCTCTGGAGCGTCACGTTGATAGCCTCAATAATTGCAATGATACTGATAGTTACT CACCCCTACGTTTTGAGGACGTATCTTAACGCAAGGTACATAATGATGGTAATGCCGTGGACTAGAAGGATAGAGAGCCC GCTGGCGAGGAGCGTGGCAGAACACCAAGGCATATTTAACGTCTTTGCGCCCAACGACTTGATAAACGTCCTCGGTATAG GCCTCGCCGCCCCTCTCGCCTTACTGATTGCAGTATACTATTACTTCAAGGGTCAAAAGGACGAGCTCCTACACGCCCTC CCTATAATAGCCTTGGGGGTGTTCGCTACGTACTTAGTCCTTACAAACGTATCAGTTTACATGCTCACGACGGTTGGTTA CCTAAGCGCGATAGCCGGCGCGCTGGCCTTGTATTGGGCTTTGAAGAGCACAACTCTCGACACGGGCAGCTTGGCAAAGC TCCTCTGGTCCACAATAGCGTTAATCGCGGCGGTACTTTTGATAAGTGGGTCTTACACCGGGATCAATTACGCTTTAAAC TATCCGCCGCCATCCTTCCTCTCCGCCGGTACCGCCTTCTACAGCCCCCTATTCCCAGACACCATGAAAGTGATCGAAAG TAAGTGTAAGTTCGTCTTGGCGTGGTGGGACTACGGCTACATGATAGGTACCGTAGCTAACAGAACCACCGTGGTCGACC CGGCCACTCTCAACTCCACAAAGATAGCCCAGGTAGCGAAGGCGCTCATAGGCAACGAGAACGACTTGTTGAAGGTTCTG AACGAGTTTTACCTTCCGAAGGAGAACACATGCATATTCACTTACGAAGTCTTTCCGCTCCTCTCAGACAAAACTGTAAT CTTAATACCCCAAGCCGGAGACTTCGCCAAGTCTGTATGGATGTTCAGAATAGCGGGGTTCGACGACACCACCATATTTA GCAAGTACATAAGGCTCAAGTACGTCGTGATCGGGACGACGGAGGACGGGCGTAGGGTTACCTTGATAGTCGATAGCCCC AACGACGTCGTTCCCACCCAGAGAGGCGTCTTAGTGAGGACCCCCCAAAGGGGCTCGGTACTGTTGAGAAGTGTAGAAGC AGTGACCTCGCGTCCCCTCTACGACATAGAGGAAGTGAACCTCTACAAGATGATATACTTAGGCTTGAAGAAAAAGGGCT TTACAGTGCTCGACTCCTTAGGACGCAAGCTGAACATGAACGTGGACTTCAGGCACTTGAAACTGGAAGAGGTAGTGGTG GACAGACTTTACCTCTCGAACAACAGAACTCTTCCATTCGTGGGGGTCGCTGTCGTTTACAAGTTCCGTTAA
Upstream 100 bases:
>100_bases GTCTTAGAGAGGGGGCCTATGGCCATTATGCTTGCTCCGAGGACGCCGGGATGAAACATACCTACAAAAGCTTTCTCAAG GAGGGCCGAGAGGGTGAGAT
Downstream 100 bases:
>100_bases GCGCTGACGACTAAGGTTTTTGAAAGCGGAAGCGGCGGGAGTCGCGTGGAAGGAAGTAATGAGGCTAGCATTGCTATTAA TACTGATGACGTTCTCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Oligosaccharyl Transferase STT3 Like-Protein
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MKYILKEHKKTVVLIVTILIIASSFYVRLIPYFKYSRYGIWLQYDDSMFEYWLSKTLYEKGVGYWYQLTPENTRHLWWWP EGRDVRRTETPGLSFTGALLYPVAKAFNLRLVDWVGIIPAFYGTLATAASALLGYTIGGPALAVLMATSTGYQYAFMQRS ISSFVEKMAPCMFFGTLFLVTLALLLKRSNLDVPAAALLGALGGGALMLASAFWGGFLAFLAVTLIFSMLVLFFTDNEAV LKNLIIFLAASTITFLVTSKWITTIWMHKTWAFTLLLYSLSMVFAAAELLVLKKFDEEKRLKLWSVTLIASIIAMILIVT HPYVLRTYLNARYIMMVMPWTRRIESPLARSVAEHQGIFNVFAPNDLINVLGIGLAAPLALLIAVYYYFKGQKDELLHAL PIIALGVFATYLVLTNVSVYMLTTVGYLSAIAGALALYWALKSTTLDTGSLAKLLWSTIALIAAVLLISGSYTGINYALN YPPPSFLSAGTAFYSPLFPDTMKVIESKCKFVLAWWDYGYMIGTVANRTTVVDPATLNSTKIAQVAKALIGNENDLLKVL NEFYLPKENTCIFTYEVFPLLSDKTVILIPQAGDFAKSVWMFRIAGFDDTTIFSKYIRLKYVVIGTTEDGRRVTLIVDSP NDVVPTQRGVLVRTPQRGSVLLRSVEAVTSRPLYDIEEVNLYKMIYLGLKKKGFTVLDSLGRKLNMNVDFRHLKLEEVVV DRLYLSNNRTLPFVGVAVVYKFR
Sequences:
>Translated_743_residues MKYILKEHKKTVVLIVTILIIASSFYVRLIPYFKYSRYGIWLQYDDSMFEYWLSKTLYEKGVGYWYQLTPENTRHLWWWP EGRDVRRTETPGLSFTGALLYPVAKAFNLRLVDWVGIIPAFYGTLATAASALLGYTIGGPALAVLMATSTGYQYAFMQRS ISSFVEKMAPCMFFGTLFLVTLALLLKRSNLDVPAAALLGALGGGALMLASAFWGGFLAFLAVTLIFSMLVLFFTDNEAV LKNLIIFLAASTITFLVTSKWITTIWMHKTWAFTLLLYSLSMVFAAAELLVLKKFDEEKRLKLWSVTLIASIIAMILIVT HPYVLRTYLNARYIMMVMPWTRRIESPLARSVAEHQGIFNVFAPNDLINVLGIGLAAPLALLIAVYYYFKGQKDELLHAL PIIALGVFATYLVLTNVSVYMLTTVGYLSAIAGALALYWALKSTTLDTGSLAKLLWSTIALIAAVLLISGSYTGINYALN YPPPSFLSAGTAFYSPLFPDTMKVIESKCKFVLAWWDYGYMIGTVANRTTVVDPATLNSTKIAQVAKALIGNENDLLKVL NEFYLPKENTCIFTYEVFPLLSDKTVILIPQAGDFAKSVWMFRIAGFDDTTIFSKYIRLKYVVIGTTEDGRRVTLIVDSP NDVVPTQRGVLVRTPQRGSVLLRSVEAVTSRPLYDIEEVNLYKMIYLGLKKKGFTVLDSLGRKLNMNVDFRHLKLEEVVV DRLYLSNNRTLPFVGVAVVYKFR >Mature_743_residues MKYILKEHKKTVVLIVTILIIASSFYVRLIPYFKYSRYGIWLQYDDSMFEYWLSKTLYEKGVGYWYQLTPENTRHLWWWP EGRDVRRTETPGLSFTGALLYPVAKAFNLRLVDWVGIIPAFYGTLATAASALLGYTIGGPALAVLMATSTGYQYAFMQRS ISSFVEKMAPCMFFGTLFLVTLALLLKRSNLDVPAAALLGALGGGALMLASAFWGGFLAFLAVTLIFSMLVLFFTDNEAV LKNLIIFLAASTITFLVTSKWITTIWMHKTWAFTLLLYSLSMVFAAAELLVLKKFDEEKRLKLWSVTLIASIIAMILIVT HPYVLRTYLNARYIMMVMPWTRRIESPLARSVAEHQGIFNVFAPNDLINVLGIGLAAPLALLIAVYYYFKGQKDELLHAL PIIALGVFATYLVLTNVSVYMLTTVGYLSAIAGALALYWALKSTTLDTGSLAKLLWSTIALIAAVLLISGSYTGINYALN YPPPSFLSAGTAFYSPLFPDTMKVIESKCKFVLAWWDYGYMIGTVANRTTVVDPATLNSTKIAQVAKALIGNENDLLKVL NEFYLPKENTCIFTYEVFPLLSDKTVILIPQAGDFAKSVWMFRIAGFDDTTIFSKYIRLKYVVIGTTEDGRRVTLIVDSP NDVVPTQRGVLVRTPQRGSVLLRSVEAVTSRPLYDIEEVNLYKMIYLGLKKKGFTVLDSLGRKLNMNVDFRHLKLEEVVV DRLYLSNNRTLPFVGVAVVYKFR
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83448; Mature: 83448
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYILKEHKKTVVLIVTILIIASSFYVRLIPYFKYSRYGIWLQYDDSMFEYWLSKTLYEK CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECHHHHHHHHHHHHHHC GVGYWYQLTPENTRHLWWWPEGRDVRRTETPGLSFTGALLYPVAKAFNLRLVDWVGIIPA CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH FYGTLATAASALLGYTIGGPALAVLMATSTGYQYAFMQRSISSFVEKMAPCMFFGTLFLV HHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLALLLKRSNLDVPAAALLGALGGGALMLASAFWGGFLAFLAVTLIFSMLVLFFTDNEAV HHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LKNLIIFLAASTITFLVTSKWITTIWMHKTWAFTLLLYSLSMVFAAAELLVLKKFDEEKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LKLWSVTLIASIIAMILIVTHPYVLRTYLNARYIMMVMPWTRRIESPLARSVAEHQGIFN HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCEE VFAPNDLINVLGIGLAAPLALLIAVYYYFKGQKDELLHALPIIALGVFATYLVLTNVSVY EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH MLTTVGYLSAIAGALALYWALKSTTLDTGSLAKLLWSTIALIAAVLLISGSYTGINYALN HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC YPPPSFLSAGTAFYSPLFPDTMKVIESKCKFVLAWWDYGYMIGTVANRTTVVDPATLNST CCCCHHHHCCHHHHCCCCHHHHHHHHHHCCEEEEEECCCHHEEECCCCCEEECCCCCCCH KIAQVAKALIGNENDLLKVLNEFYLPKENTCIFTYEVFPLLSDKTVILIPQAGDFAKSVW HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEEEECCCCHHHHHH MFRIAGFDDTTIFSKYIRLKYVVIGTTEDGRRVTLIVDSPNDVVPTQRGVLVRTPQRGSV EEEEECCCCHHHHHHHEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCHH LLRSVEAVTSRPLYDIEEVNLYKMIYLGLKKKGFTVLDSLGRKLNMNVDFRHLKLEEVVV HHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHCCCEEECCCCHHHHHHHHHHH DRLYLSNNRTLPFVGVAVVYKFR HHHHHCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MKYILKEHKKTVVLIVTILIIASSFYVRLIPYFKYSRYGIWLQYDDSMFEYWLSKTLYEK CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECHHHHHHHHHHHHHHC GVGYWYQLTPENTRHLWWWPEGRDVRRTETPGLSFTGALLYPVAKAFNLRLVDWVGIIPA CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH FYGTLATAASALLGYTIGGPALAVLMATSTGYQYAFMQRSISSFVEKMAPCMFFGTLFLV HHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLALLLKRSNLDVPAAALLGALGGGALMLASAFWGGFLAFLAVTLIFSMLVLFFTDNEAV HHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LKNLIIFLAASTITFLVTSKWITTIWMHKTWAFTLLLYSLSMVFAAAELLVLKKFDEEKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LKLWSVTLIASIIAMILIVTHPYVLRTYLNARYIMMVMPWTRRIESPLARSVAEHQGIFN HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCEE VFAPNDLINVLGIGLAAPLALLIAVYYYFKGQKDELLHALPIIALGVFATYLVLTNVSVY EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH MLTTVGYLSAIAGALALYWALKSTTLDTGSLAKLLWSTIALIAAVLLISGSYTGINYALN HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC YPPPSFLSAGTAFYSPLFPDTMKVIESKCKFVLAWWDYGYMIGTVANRTTVVDPATLNST CCCCHHHHCCHHHHCCCCHHHHHHHHHHCCEEEEEECCCHHEEECCCCCEEECCCCCCCH KIAQVAKALIGNENDLLKVLNEFYLPKENTCIFTYEVFPLLSDKTVILIPQAGDFAKSVW HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEEEECCCCHHHHHH MFRIAGFDDTTIFSKYIRLKYVVIGTTEDGRRVTLIVDSPNDVVPTQRGVLVRTPQRGSV EEEEECCCCHHHHHHHEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEECCCCCHH LLRSVEAVTSRPLYDIEEVNLYKMIYLGLKKKGFTVLDSLGRKLNMNVDFRHLKLEEVVV HHHHHHHHHCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHCCCEEECCCCHHHHHHHHHHH DRLYLSNNRTLPFVGVAVVYKFR HHHHHCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA