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The map label for this gene is hcp1 [H]

Identifier: 156936600

GI number: 156936600

Start: 43387

End: 43995

Strand: Direct

Name: hcp1 [H]

Synonym: ESA_pESA3p05481

Alternate gene names: 156936600

Gene position: 43387-43995 (Clockwise)

Preceding gene: 156936599

Following gene: 156936601

Centisome position: 33.07

GC content: 48.44

Gene sequence:

>609_bases
ATGAGATTCGTCTTAATTTCCGGAGCGGTATTGTTTAGCGTTTTGAATGAACTTACAGTGAAACCGAATTATTTGCCTCC
GGGCTTTGCTTATTCTCACCTGCTATCTGATAACACGGAGTATTACATGGCTATTGATATGTTCCTGAAAGTGGAAGGCG
TGACCGGCGAATCTAAAGATGCTAATCATGCCAGCTGGATCGATGTCCTTTCTTTTAACTGGGGCGCAGCGCAGCCGGGC
AATATGGCGGTCGGCGGTGGCGGCGGTGCCGGTAAAGTTAACTTTCAGGATTTAGCCGTACAGGCCATTGTGGATAAAGG
CACGCCCGCCATTCTTAAATTCTGCGCCAGCGGTAAACATGTCAATAAGGTGGAGCTTTCTGTCTGTAAGGCCGGTGGTC
AGCAGGTAGAATATTCAAAAATCGTTCTTGAAGATGTGCTGGTGACCCGCACGGAATTCACGGGCGTGGGGCAGACAGAT
ACGGTTCTTGTCAGTTACTACTTCCAGGCCGCGAAGGTGAATTTCCATTACTGGGAACAGTCGAACCAGGGTACCAAAGG
TGCGGAAACCAAAGCCGGTTGGGATATTAAACAAAATAAAGAGCTCTGA

Upstream 100 bases:

>100_bases
GGGTTTTTTGTGAACCACTCCACATTTAATTCGTTCATAACGATTAATGCTCCTGCAATAAAAGTGAAACACATACAGGA
TATACGCGGAAATAATTCGA

Downstream 100 bases:

>100_bases
TAAGAAAGGAGTGGCAAGATGGCAGAAATTAACTCCATGATAAATGCCCTTCTTTCCGATCGGTCCCACTTTACTGAACA
AGAAATACATACCATTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRFVLISGAVLFSVLNELTVKPNYLPPGFAYSHLLSDNTEYYMAIDMFLKVEGVTGESKDANHASWIDVLSFNWGAAQPG
NMAVGGGGGAGKVNFQDLAVQAIVDKGTPAILKFCASGKHVNKVELSVCKAGGQQVEYSKIVLEDVLVTRTEFTGVGQTD
TVLVSYYFQAAKVNFHYWEQSNQGTKGAETKAGWDIKQNKEL

Sequences:

>Translated_202_residues
MRFVLISGAVLFSVLNELTVKPNYLPPGFAYSHLLSDNTEYYMAIDMFLKVEGVTGESKDANHASWIDVLSFNWGAAQPG
NMAVGGGGGAGKVNFQDLAVQAIVDKGTPAILKFCASGKHVNKVELSVCKAGGQQVEYSKIVLEDVLVTRTEFTGVGQTD
TVLVSYYFQAAKVNFHYWEQSNQGTKGAETKAGWDIKQNKEL
>Mature_202_residues
MRFVLISGAVLFSVLNELTVKPNYLPPGFAYSHLLSDNTEYYMAIDMFLKVEGVTGESKDANHASWIDVLSFNWGAAQPG
NMAVGGGGGAGKVNFQDLAVQAIVDKGTPAILKFCASGKHVNKVELSVCKAGGQQVEYSKIVLEDVLVTRTEFTGVGQTD
TVLVSYYFQAAKVNFHYWEQSNQGTKGAETKAGWDIKQNKEL

Specific function: Required for assembly of the protein secretion apparatus HSI-I. Actively secreted during chronic infection of cystic fibrosis patients [H]

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 21951; Mature: 21951

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVLISGAVLFSVLNELTVKPNYLPPGFAYSHLLSDNTEYYMAIDMFLKVEGVTGESKD
CEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCC
ANHASWIDVLSFNWGAAQPGNMAVGGGGGAGKVNFQDLAVQAIVDKGTPAILKFCASGKH
CCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHEEEEECCCCCHHHHHHHCCCCC
VNKVELSVCKAGGQQVEYSKIVLEDVLVTRTEFTGVGQTDTVLVSYYFQAAKVNFHYWEQ
CCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHEEEEEEEEC
SNQGTKGAETKAGWDIKQNKEL
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFVLISGAVLFSVLNELTVKPNYLPPGFAYSHLLSDNTEYYMAIDMFLKVEGVTGESKD
CEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCC
ANHASWIDVLSFNWGAAQPGNMAVGGGGGAGKVNFQDLAVQAIVDKGTPAILKFCASGKH
CCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHEEEEECCCCCHHHHHHHCCCCC
VNKVELSVCKAGGQQVEYSKIVLEDVLVTRTEFTGVGQTDTVLVSYYFQAAKVNFHYWEQ
CCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHEEEEEEEEC
SNQGTKGAETKAGWDIKQNKEL
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]