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The map label for this gene is ydfF [H]

Identifier: 156936589

GI number: 156936589

Start: 34122

End: 34847

Strand: Direct

Name: ydfF [H]

Synonym: ESA_pESA3p05470

Alternate gene names: 156936589

Gene position: 34122-34847 (Clockwise)

Preceding gene: 156936588

Following gene: 156936590

Centisome position: 26.01

GC content: 66.25

Gene sequence:

>726_bases
ATGGGCAATCCCGGACGACACCCCCTGACAGACGCCGACACCGCGCCGGAGCTTGGACAGGCGATGTCGGGCGTCGCGGC
GGCGATGGCCGATCCGTCGCGCGTGGCGATGTTGTGCGCGCTGATGGATGGCCGGGCGTGGACGGCGACAGAGCTTAGCG
CGGTGGCGGATATCGCGCCGTCCACCGCGAGCGCGCATCTCGCGCGGCTGCTCAGCCACGGTCTGGTGGTTTGCCTTTCT
CAGGGGCGGCATCGCTACTACCGGCTGGCGGGCCATGAGATCGCCGGGCTGCTGGAGACGCTGATGGGCGTCTCCATGAA
TCCACAGCGCCAGCCAGTGTCCAGCACACCCGGACATTTACGCCAGGCGCGCACCTGCTATGACCATCTGGCGGGCGAGC
TCGCCGTGCAGCTCTACGCGTTTATGCTGGAGGAAAAATGGCTGACGCCGGACGGCAATGCGCTCACCGAACGCGGGCGC
GAGCGTTTTACGGCGCTTGGCGTACCGCTTAATCCAAAGCCCCGGCGCAAAGCGTGCTGCCCGTGTCTCGACTGGAGCGA
ACGGCGTTATCACCTGGGCGGTGATGCCGGTGCGGCGCTACTGACGCTCTTTTTACAGGAAGGCTGGCTTCTGAGAACGC
CAGGCTACCGGGAAGTGACCGTCACCGCCGCCGGGCGCGCTGCGCTGCAACGCGTCTTCGCTGTTAATGGCGCGGTAACA
GTCTGA

Upstream 100 bases:

>100_bases
CCGAAGGCGGCGTGAATATTCTTGTGCAGTACAGCGATCACGCGAACCGGTTGATTCTTGTCACCGATAATCCTGAACAG
GCAGAAAAGGTAACCAGACC

Downstream 100 bases:

>100_bases
AAACCGCACGATAATTCATCGTCCCGTCATGCAAACACTATACTTATCAGCCTTGGACCATCGCTAAATGAGGAACCACT
GATGAGCACGATCAAGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MGNPGRHPLTDADTAPELGQAMSGVAAAMADPSRVAMLCALMDGRAWTATELSAVADIAPSTASAHLARLLSHGLVVCLS
QGRHRYYRLAGHEIAGLLETLMGVSMNPQRQPVSSTPGHLRQARTCYDHLAGELAVQLYAFMLEEKWLTPDGNALTERGR
ERFTALGVPLNPKPRRKACCPCLDWSERRYHLGGDAGAALLTLFLQEGWLLRTPGYREVTVTAAGRAALQRVFAVNGAVT
V

Sequences:

>Translated_241_residues
MGNPGRHPLTDADTAPELGQAMSGVAAAMADPSRVAMLCALMDGRAWTATELSAVADIAPSTASAHLARLLSHGLVVCLS
QGRHRYYRLAGHEIAGLLETLMGVSMNPQRQPVSSTPGHLRQARTCYDHLAGELAVQLYAFMLEEKWLTPDGNALTERGR
ERFTALGVPLNPKPRRKACCPCLDWSERRYHLGGDAGAALLTLFLQEGWLLRTPGYREVTVTAAGRAALQRVFAVNGAVT
V
>Mature_240_residues
GNPGRHPLTDADTAPELGQAMSGVAAAMADPSRVAMLCALMDGRAWTATELSAVADIAPSTASAHLARLLSHGLVVCLSQ
GRHRYYRLAGHEIAGLLETLMGVSMNPQRQPVSSTPGHLRQARTCYDHLAGELAVQLYAFMLEEKWLTPDGNALTERGRE
RFTALGVPLNPKPRRKACCPCLDWSERRYHLGGDAGAALLTLFLQEGWLLRTPGYREVTVTAAGRAALQRVFAVNGAVTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 25954; Mature: 25823

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNPGRHPLTDADTAPELGQAMSGVAAAMADPSRVAMLCALMDGRAWTATELSAVADIAP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
STASAHLARLLSHGLVVCLSQGRHRYYRLAGHEIAGLLETLMGVSMNPQRQPVSSTPGHL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
RQARTCYDHLAGELAVQLYAFMLEEKWLTPDGNALTERGRERFTALGVPLNPKPRRKACC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCC
PCLDWSERRYHLGGDAGAALLTLFLQEGWLLRTPGYREVTVTAAGRAALQRVFAVNGAVT
CCCCCCCCEEECCCCHHHHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHHHCCCCC
V
C
>Mature Secondary Structure 
GNPGRHPLTDADTAPELGQAMSGVAAAMADPSRVAMLCALMDGRAWTATELSAVADIAP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
STASAHLARLLSHGLVVCLSQGRHRYYRLAGHEIAGLLETLMGVSMNPQRQPVSSTPGHL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
RQARTCYDHLAGELAVQLYAFMLEEKWLTPDGNALTERGRERFTALGVPLNPKPRRKACC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCC
PCLDWSERRYHLGGDAGAALLTLFLQEGWLLRTPGYREVTVTAAGRAALQRVFAVNGAVT
CCCCCCCCEEECCCCHHHHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHHHCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]