| Definition | Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence. |
|---|---|
| Accession | NC_009780 |
| Length | 131,196 |
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The map label for this gene is 156936573
Identifier: 156936573
GI number: 156936573
Start: 24448
End: 25110
Strand: Direct
Name: 156936573
Synonym: ESA_pESA3p05454
Alternate gene names: NA
Gene position: 24448-25110 (Clockwise)
Preceding gene: 156936570
Following gene: 156936574
Centisome position: 18.63
GC content: 62.14
Gene sequence:
>663_bases ATGCTTGTAGATGTTGTGTTAAGACGACGCCGTTATGATATCGGGACACGTTATATTCAGGGACTCGCGTTTATGTATGC CATTCAGCCGCCGCTGACACCGCGTAAAGCGCCGCGCCAGGCGCGTTCACGCGCGCTGGTGGAGGCGATTATCGAGGCGA CGGCTCGCATTTTCGAGCGCGAGGGCGCGGCGGCCTGCACGACGAATGCCGTCGCGGAAATCGCAGGCGTCAGCATCGGC TCGCTGTATCAGTATTTCCCGAACCGTCACGCCTTAACGGCGGCGCTGGTGGCGCGCGAACATGAATCGCTGCTTTCGGC CATGCAGCACGCAGCGGCGCGTCCCGATCCGGCGGATCGTCTTTCAGGCATGGTTGACGCAGCTGTGGATTATGAGTTTG CACGGCCCGCGCTTGCACGCACGCTGGATTTGCAGGAGGCAGCGCCGGAATTTCAGGCGCATCAGCAGGCGATGCTGGCC ACGCTTCATCGCTGTGTTGCAACGGCGCTTGAAGAGAGTGAGACCACGGCATGGGATGTCATCGCGCTGGTGCAGGGCAT GATCGCGATGGCCATCGCGCGAGGCGAGAGCTCGCCGGCTGCGCTGAAGCGCCGCATTCACCGCGCCGCCTTTGGTTATC TCGGCTGGGCTGCGCCTGATTAA
Upstream 100 bases:
>100_bases TCGGCGCTGGCATCAAGCCAGCTACGGTTGGCTTTCACCAGCATAAACAGCGTGACGGTCTCTGGTGCGGTATTCATAAC GCTCTCCCTGAAAACTATTA
Downstream 100 bases:
>100_bases GCATTTAATAAAGGAGAAAACATGATAGTCAGAACCTGGCATGGCTGCGTGCCGCTGGAACACGCCGACGGCTTTGCCGC GCATTTACAGAAAACCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcription Regulator Protein; Transcriptional Regulator Protein; AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; TetR Family Regulatory Protein; TetR Family Transcriptional Regulatory Protein; TetR Family Regulatory
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MLVDVVLRRRRYDIGTRYIQGLAFMYAIQPPLTPRKAPRQARSRALVEAIIEATARIFEREGAAACTTNAVAEIAGVSIG SLYQYFPNRHALTAALVAREHESLLSAMQHAAARPDPADRLSGMVDAAVDYEFARPALARTLDLQEAAPEFQAHQQAMLA TLHRCVATALEESETTAWDVIALVQGMIAMAIARGESSPAALKRRIHRAAFGYLGWAAPD
Sequences:
>Translated_220_residues MLVDVVLRRRRYDIGTRYIQGLAFMYAIQPPLTPRKAPRQARSRALVEAIIEATARIFEREGAAACTTNAVAEIAGVSIG SLYQYFPNRHALTAALVAREHESLLSAMQHAAARPDPADRLSGMVDAAVDYEFARPALARTLDLQEAAPEFQAHQQAMLA TLHRCVATALEESETTAWDVIALVQGMIAMAIARGESSPAALKRRIHRAAFGYLGWAAPD >Mature_220_residues MLVDVVLRRRRYDIGTRYIQGLAFMYAIQPPLTPRKAPRQARSRALVEAIIEATARIFEREGAAACTTNAVAEIAGVSIG SLYQYFPNRHALTAALVAREHESLLSAMQHAAARPDPADRLSGMVDAAVDYEFARPALARTLDLQEAAPEFQAHQQAMLA TLHRCVATALEESETTAWDVIALVQGMIAMAIARGESSPAALKRRIHRAAFGYLGWAAPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24024; Mature: 24024
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVDVVLRRRRYDIGTRYIQGLAFMYAIQPPLTPRKAPRQARSRALVEAIIEATARIFER CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EGAAACTTNAVAEIAGVSIGSLYQYFPNRHALTAALVAREHESLLSAMQHAAARPDPADR CCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LSGMVDAAVDYEFARPALARTLDLQEAAPEFQAHQQAMLATLHRCVATALEESETTAWDV HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IALVQGMIAMAIARGESSPAALKRRIHRAAFGYLGWAAPD HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLVDVVLRRRRYDIGTRYIQGLAFMYAIQPPLTPRKAPRQARSRALVEAIIEATARIFER CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EGAAACTTNAVAEIAGVSIGSLYQYFPNRHALTAALVAREHESLLSAMQHAAARPDPADR CCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LSGMVDAAVDYEFARPALARTLDLQEAAPEFQAHQQAMLATLHRCVATALEESETTAWDV HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IALVQGMIAMAIARGESSPAALKRRIHRAAFGYLGWAAPD HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA