| Definition | Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence. |
|---|---|
| Accession | NC_009780 |
| Length | 131,196 |
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The map label for this gene is 156936567
Identifier: 156936567
GI number: 156936567
Start: 20030
End: 20689
Strand: Direct
Name: 156936567
Synonym: ESA_pESA3p05448
Alternate gene names: NA
Gene position: 20030-20689 (Clockwise)
Preceding gene: 156936566
Following gene: 156936569
Centisome position: 15.27
GC content: 53.18
Gene sequence:
>660_bases ATGATTTCTGTTAATCTTCAGTTAGAGCATTTGCTCAAGTGGGGTGGGATGCTATTTGAGCAACTGCTCAAAGTCAATCA GAGAAAAGCAGAGCGGGCCTTTGTGAAAGAGAAAATCATTAATGCGGCGATCGCCTTGTTCATTGAACAGGGCATTGAAA ACGTCAAAACGCGCGATCTGACGGAGCATCTGGGCATTTCGCGCAGCCATATCTATCACTATTTCAAAAACTGGCAGGCG CTGTGCGTGGAGTCGATTTCCACGTTTCTTGAGAATGAACTGAATGAATTTGTCTTGCGGACGGCATCGTTGCCCGCCCG CGAAAGGCTGAAAGCGTTTATCGAAGGGGTGATTTCCACCACGCCGGACCCGACCGCGAAGCTGTACGGCTCGCTGTGGC AGCTCGCGGCCCATAATGCTGAGTATGCGCAGTTAATGGAATCGATACTCGCGCGCTGGCATGACGCGCTGGTGGATATT CTCGCGGCGGGCGCGCAGGAAGGCGTGTTTCGCCCTGTCAATACCGCGCGTTTCGCAAGGCAGCTCGACGCCATGCTGTT CGGCTACAGCGATCATCTCTACACGCTGCCTTCTGATGACGCGCTCCGCCAGGCACAGGACGATATCGACGATTTTATCG GACAGAATTTGCTGGTGTAG
Upstream 100 bases:
>100_bases AAAAAAGAGCTTTTTGCGGTGGCGTCGCGCCAGCGTTTTCAGCGTGCCGGCGGCGCTGGCAGTGGCAGGTGAGGTCGGGA TATTTACGCTGTGCGTCTTC
Downstream 100 bases:
>100_bases CGGTGCCGGTCGCTTTCCATAAGCGGGCCTGAGGGTTGTGAAAATTCGGTAAACATGCACGTTCACACTCAGGCCTTTGT CACAAAACGGAAAACTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator; HTH-Type Transcriptional Regulator BetI
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MISVNLQLEHLLKWGGMLFEQLLKVNQRKAERAFVKEKIINAAIALFIEQGIENVKTRDLTEHLGISRSHIYHYFKNWQA LCVESISTFLENELNEFVLRTASLPARERLKAFIEGVISTTPDPTAKLYGSLWQLAAHNAEYAQLMESILARWHDALVDI LAAGAQEGVFRPVNTARFARQLDAMLFGYSDHLYTLPSDDALRQAQDDIDDFIGQNLLV
Sequences:
>Translated_219_residues MISVNLQLEHLLKWGGMLFEQLLKVNQRKAERAFVKEKIINAAIALFIEQGIENVKTRDLTEHLGISRSHIYHYFKNWQA LCVESISTFLENELNEFVLRTASLPARERLKAFIEGVISTTPDPTAKLYGSLWQLAAHNAEYAQLMESILARWHDALVDI LAAGAQEGVFRPVNTARFARQLDAMLFGYSDHLYTLPSDDALRQAQDDIDDFIGQNLLV >Mature_219_residues MISVNLQLEHLLKWGGMLFEQLLKVNQRKAERAFVKEKIINAAIALFIEQGIENVKTRDLTEHLGISRSHIYHYFKNWQA LCVESISTFLENELNEFVLRTASLPARERLKAFIEGVISTTPDPTAKLYGSLWQLAAHNAEYAQLMESILARWHDALVDI LAAGAQEGVFRPVNTARFARQLDAMLFGYSDHLYTLPSDDALRQAQDDIDDFIGQNLLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24915; Mature: 24915
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVNLQLEHLLKWGGMLFEQLLKVNQRKAERAFVKEKIINAAIALFIEQGIENVKTRDL CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEHLGISRSHIYHYFKNWQALCVESISTFLENELNEFVLRTASLPARERLKAFIEGVIST HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC TPDPTAKLYGSLWQLAAHNAEYAQLMESILARWHDALVDILAAGAQEGVFRPVNTARFAR CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHH QLDAMLFGYSDHLYTLPSDDALRQAQDDIDDFIGQNLLV HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MISVNLQLEHLLKWGGMLFEQLLKVNQRKAERAFVKEKIINAAIALFIEQGIENVKTRDL CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEHLGISRSHIYHYFKNWQALCVESISTFLENELNEFVLRTASLPARERLKAFIEGVIST HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC TPDPTAKLYGSLWQLAAHNAEYAQLMESILARWHDALVDILAAGAQEGVFRPVNTARFAR CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHH QLDAMLFGYSDHLYTLPSDDALRQAQDDIDDFIGQNLLV HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA