Click here to switch to the map view.

The map label for this gene is mtrC [H]

Identifier: 156936562

GI number: 156936562

Start: 13373

End: 14521

Strand: Direct

Name: mtrC [H]

Synonym: ESA_pESA3p05443

Alternate gene names: 156936562

Gene position: 13373-14521 (Clockwise)

Preceding gene: 156936561

Following gene: 156936563

Centisome position: 10.19

GC content: 64.49

Gene sequence:

>1149_bases
ATGTCCGAAGCATTCACCGATTATTTTCGTCATTGCGTGCAGCATCTTTTCCATGCGGCGCGTGCTTTTTCTTTCTTTGC
CCTGCTACCCATTGTGGTACTGGCTGCGATCCTGCCACTCTTAACAGGCTGTGGCGACAATCATCAGACCGACCGGCCCG
CGCCGCCACGTCCGGTGCGGTATCTGGTTATCACAGCTTCCTCGCCTGCGCACGCTGACCTGCGCACAGGCGAGATCCGC
GCCCATGACGAAACCACCCTGAGCTTTCGTACCGATGGCAGACTCGCCAGCCGTGAAGTGGACATGGGTGCCACGGTTCA
CGCGGGGCAGTTGCTTGCCACGCTTGAGCGCGCCACCGGCGAAAACCAGCAGGCCAGCGCTGAGGCGGAGCGCCAGGGCG
CGCAGGCGGCGGAGCGGGTGGCAGCGCTGAATCTTAAGCGTATGCAGAAGCTAATGCCGTCCGGCGCTATCGCCCAAAGC
CAGCTCGACAGCGCGCGGGCGGACTGGCAGAGCGCCGTTGCGCGGCTGAAAAGCAGCGAGGCCGCGTTGCGTAACGCGCG
TGAGAGCCTTGACTGGACGCAACTGGCGGCGCCTGCCGACGGCGTGATTACCAGCGTCAGCGCGTCGGCAGGGCAGGTGG
TAAGCGCCGGGCAGAGCATCTTCACACTCGCTACCAGCCATGCGCGTGACGTCGTGCTGGATGTCAGCGATCCGCAGCGG
TTTTCGCGCGCGATGCAGGCCCGGTGGCAAGTCGCCTCACTCACGGAGCCCGCCATCACCGCGACCGCCGTGCTGCGGGA
CATCAGTCCGCAGGCCGACCCGCAGACGCGCACCTGGCGAGTGCGGCTGATTTTAACGGATCCCCCTGACGCCATGGCGC
TCGGCGCGAGCGTCACGGTAGCGCTCCCGCAAACGCAGACGCCGGGTTTTACCGTGCCCGCTTGCGCGCTCACCCGCCTG
AATGGTCATCCGACGCTCTTTATCATCGATGCGCAACAGCGGGCGCAGCCGCGGCCAGTGACTATCGCGCAGTACACCTC
AGACAGCGTCATCATCGCAGGCGGCGTGCGTCCTGGCGATAAAGTGATTGTGGCGGGCGTCAGTAAATTGCGCGCCGGTG
AAAAGGTCATCCCTGGCGAGGCGATGTAA

Upstream 100 bases:

>100_bases
CCAATAAAAATTGCTGGCTTGATGGTTTCTTGACGCAAAAACGAACGAATCTCGACGCAACCACGCTGAAATGACGCTGA
TTTCCTGAAGGAGCGGCGTC

Downstream 100 bases:

>100_bases
ATGAAACCGACCTTTAATCTCTCGGCGTGGGCGCTGGCGCACCAGCAACTGGTGAGTTTTTTTATGCTGCTGATTATCGC
GACAGGCGTGCTCTGTTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSEAFTDYFRHCVQHLFHAARAFSFFALLPIVVLAAILPLLTGCGDNHQTDRPAPPRPVRYLVITASSPAHADLRTGEIR
AHDETTLSFRTDGRLASREVDMGATVHAGQLLATLERATGENQQASAEAERQGAQAAERVAALNLKRMQKLMPSGAIAQS
QLDSARADWQSAVARLKSSEAALRNARESLDWTQLAAPADGVITSVSASAGQVVSAGQSIFTLATSHARDVVLDVSDPQR
FSRAMQARWQVASLTEPAITATAVLRDISPQADPQTRTWRVRLILTDPPDAMALGASVTVALPQTQTPGFTVPACALTRL
NGHPTLFIIDAQQRAQPRPVTIAQYTSDSVIIAGGVRPGDKVIVAGVSKLRAGEKVIPGEAM

Sequences:

>Translated_382_residues
MSEAFTDYFRHCVQHLFHAARAFSFFALLPIVVLAAILPLLTGCGDNHQTDRPAPPRPVRYLVITASSPAHADLRTGEIR
AHDETTLSFRTDGRLASREVDMGATVHAGQLLATLERATGENQQASAEAERQGAQAAERVAALNLKRMQKLMPSGAIAQS
QLDSARADWQSAVARLKSSEAALRNARESLDWTQLAAPADGVITSVSASAGQVVSAGQSIFTLATSHARDVVLDVSDPQR
FSRAMQARWQVASLTEPAITATAVLRDISPQADPQTRTWRVRLILTDPPDAMALGASVTVALPQTQTPGFTVPACALTRL
NGHPTLFIIDAQQRAQPRPVTIAQYTSDSVIIAGGVRPGDKVIVAGVSKLRAGEKVIPGEAM
>Mature_381_residues
SEAFTDYFRHCVQHLFHAARAFSFFALLPIVVLAAILPLLTGCGDNHQTDRPAPPRPVRYLVITASSPAHADLRTGEIRA
HDETTLSFRTDGRLASREVDMGATVHAGQLLATLERATGENQQASAEAERQGAQAAERVAALNLKRMQKLMPSGAIAQSQ
LDSARADWQSAVARLKSSEAALRNARESLDWTQLAAPADGVITSVSASAGQVVSAGQSIFTLATSHARDVVLDVSDPQRF
SRAMQARWQVASLTEPAITATAVLRDISPQADPQTRTWRVRLILTDPPDAMALGASVTVALPQTQTPGFTVPACALTRLN
GHPTLFIIDAQQRAQPRPVTIAQYTSDSVIIAGGVRPGDKVIVAGVSKLRAGEKVIPGEAM

Specific function: Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789665, Length=371, Percent_Identity=27.2237196765499, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082036, Length=316, Percent_Identity=25.9493670886076, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786668, Length=380, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081796, Length=336, Percent_Identity=25.5952380952381, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789929, Length=364, Percent_Identity=21.7032967032967, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 40798; Mature: 40667

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAFTDYFRHCVQHLFHAARAFSFFALLPIVVLAAILPLLTGCGDNHQTDRPAPPRPVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
YLVITASSPAHADLRTGEIRAHDETTLSFRTDGRLASREVDMGATVHAGQLLATLERATG
EEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHCC
ENQQASAEAERQGAQAAERVAALNLKRMQKLMPSGAIAQSQLDSARADWQSAVARLKSSE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALRNARESLDWTQLAAPADGVITSVSASAGQVVSAGQSIFTLATSHARDVVLDVSDPQR
HHHHHHHHHCCHHHHCCCCCCCEEECCCCCCHHHHCCCHHEEEECCCCCEEEEECCCHHH
FSRAMQARWQVASLTEPAITATAVLRDISPQADPQTRTWRVRLILTDPPDAMALGASVTV
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHEECCEEEE
ALPQTQTPGFTVPACALTRLNGHPTLFIIDAQQRAQPRPVTIAQYTSDSVIIAGGVRPGD
EECCCCCCCCCCHHHHHEECCCCCEEEEEECHHHCCCCCEEEEEECCCCEEEECCCCCCC
KVIVAGVSKLRAGEKVIPGEAM
CEEEEEHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SEAFTDYFRHCVQHLFHAARAFSFFALLPIVVLAAILPLLTGCGDNHQTDRPAPPRPVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
YLVITASSPAHADLRTGEIRAHDETTLSFRTDGRLASREVDMGATVHAGQLLATLERATG
EEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHCC
ENQQASAEAERQGAQAAERVAALNLKRMQKLMPSGAIAQSQLDSARADWQSAVARLKSSE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALRNARESLDWTQLAAPADGVITSVSASAGQVVSAGQSIFTLATSHARDVVLDVSDPQR
HHHHHHHHHCCHHHHCCCCCCCEEECCCCCCHHHHCCCHHEEEECCCCCEEEEECCCHHH
FSRAMQARWQVASLTEPAITATAVLRDISPQADPQTRTWRVRLILTDPPDAMALGASVTV
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHEECCEEEE
ALPQTQTPGFTVPACALTRLNGHPTLFIIDAQQRAQPRPVTIAQYTSDSVIIAGGVRPGD
EECCCCCCCCCCHHHHHEECCCCCEEEEEECHHHCCCCCEEEEEECCCCEEEECCCCCCC
KVIVAGVSKLRAGEKVIPGEAM
CEEEEEHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8196548 [H]