Definition Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence.
Accession NC_009780
Length 131,196

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The map label for this gene is 156936556

Identifier: 156936556

GI number: 156936556

Start: 8276

End: 8971

Strand: Direct

Name: 156936556

Synonym: ESA_pESA3p05437

Alternate gene names: NA

Gene position: 8276-8971 (Clockwise)

Preceding gene: 156936555

Following gene: 156936557

Centisome position: 6.31

GC content: 56.75

Gene sequence:

>696_bases
ATGACCCGGACACAACGGCTTTTAGAACTGCTCCAGCTTTTGCGATCCTACCGTTACCCGGTGACGGCGATGACGCTCGC
GGAACGGCTTGATGTCAGCGTGCGCAGTATTTATCGCGATATCGAGACGCTGAAAATGCAGGGTGTGGATATCGAAGGCA
GCGCGGGGATTGGTTATGTCCTGCAATCCGATTACCACCTGCCGCCGCTGATGTTTGATGCGCATGAAGTTGACGCGCTG
ATACTCGGCCTGCACTGGGTGATGCGCCATACCGACCCGCAACTGGAAGCCGCGGCCCGTAACGCGGTGGCGAAAATTCA
CGCCATTCTTCCGGAGAATCTCGCGCAGCAGATAAATTCCCCGTCGCTGATGGTGGCACCGACCGGCAATGAAGGTAGCC
TTCGGTTTCTGACGGATATTCGCAGCGCAATCCATCAGCGCAGAAAGCTTGAGCTGGTCTATACCGATAAAGACGGCACG
GCGTCATCGCGTCTCGTGTGGCCGATTGCGCTGGGTTTTTTTGACGCGGTCAGGGTACTGGCGTGCTGGTGCGAGCTGCG
CCAGGCGTTCCGCCATTTTCGTATCGACCGGATGCAACAGGTGGCCATTAGCGAGCAGTTGTGTCCGCAATCGCGCTATA
AATTGCTGAAAGAGTGGAAGAGCGCGGAAGGGATTGCGCAGGCAAAAACCTACTGA

Upstream 100 bases:

>100_bases
TTATTCGCGGGGATAATGGCAAACTCCGGCTCGTCCGCGGGCCAGAACCGCTGGATTTACTTTACTGATCGCATAACACG
TACTGCACCCGAGACCCGAC

Downstream 100 bases:

>100_bases
CAAAAACTGTCACACCCCGCTGTTACTGTCATGGCTCACTACACAAGGAGAGCCAAATGATCACTGCCGATATGTCTATT
CTCTATGTTGAGAACGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; DeoR-Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; Transcription Regulator Protein; NB-Dependent Receptor; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Type; Regulatory Protein; Bacterial Regulatory Protein DeoR Family; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; HTH Domain-Containing; Regulatory Protein Deor; Helix-Turn-Helix Domain-Containing Protein; Deor Family Transcriptional Regulator; HTH Domain Protein; Deor-Family Transcriptional Regulator; Transcriptional Regulator-Like; Transcriptional Repressor

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYVLQSDYHLPPLMFDAHEVDAL
ILGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINSPSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGT
ASSRLVWPIALGFFDAVRVLACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY

Sequences:

>Translated_231_residues
MTRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYVLQSDYHLPPLMFDAHEVDAL
ILGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINSPSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGT
ASSRLVWPIALGFFDAVRVLACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY
>Mature_230_residues
TRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYVLQSDYHLPPLMFDAHEVDALI
LGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINSPSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGTA
SSRLVWPIALGFFDAVRVLACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26376; Mature: 26245

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LQSDYHLPPLMFDAHEVDALILGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINS
EECCCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGTASSRLVWPIALGFFDAVRVL
CCEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHH
ACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
TRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYV
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LQSDYHLPPLMFDAHEVDALILGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINS
EECCCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGTASSRLVWPIALGFFDAVRVL
CCEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHH
ACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA