| Definition | Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence. |
|---|---|
| Accession | NC_009780 |
| Length | 131,196 |
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The map label for this gene is 156936556
Identifier: 156936556
GI number: 156936556
Start: 8276
End: 8971
Strand: Direct
Name: 156936556
Synonym: ESA_pESA3p05437
Alternate gene names: NA
Gene position: 8276-8971 (Clockwise)
Preceding gene: 156936555
Following gene: 156936557
Centisome position: 6.31
GC content: 56.75
Gene sequence:
>696_bases ATGACCCGGACACAACGGCTTTTAGAACTGCTCCAGCTTTTGCGATCCTACCGTTACCCGGTGACGGCGATGACGCTCGC GGAACGGCTTGATGTCAGCGTGCGCAGTATTTATCGCGATATCGAGACGCTGAAAATGCAGGGTGTGGATATCGAAGGCA GCGCGGGGATTGGTTATGTCCTGCAATCCGATTACCACCTGCCGCCGCTGATGTTTGATGCGCATGAAGTTGACGCGCTG ATACTCGGCCTGCACTGGGTGATGCGCCATACCGACCCGCAACTGGAAGCCGCGGCCCGTAACGCGGTGGCGAAAATTCA CGCCATTCTTCCGGAGAATCTCGCGCAGCAGATAAATTCCCCGTCGCTGATGGTGGCACCGACCGGCAATGAAGGTAGCC TTCGGTTTCTGACGGATATTCGCAGCGCAATCCATCAGCGCAGAAAGCTTGAGCTGGTCTATACCGATAAAGACGGCACG GCGTCATCGCGTCTCGTGTGGCCGATTGCGCTGGGTTTTTTTGACGCGGTCAGGGTACTGGCGTGCTGGTGCGAGCTGCG CCAGGCGTTCCGCCATTTTCGTATCGACCGGATGCAACAGGTGGCCATTAGCGAGCAGTTGTGTCCGCAATCGCGCTATA AATTGCTGAAAGAGTGGAAGAGCGCGGAAGGGATTGCGCAGGCAAAAACCTACTGA
Upstream 100 bases:
>100_bases TTATTCGCGGGGATAATGGCAAACTCCGGCTCGTCCGCGGGCCAGAACCGCTGGATTTACTTTACTGATCGCATAACACG TACTGCACCCGAGACCCGAC
Downstream 100 bases:
>100_bases CAAAAACTGTCACACCCCGCTGTTACTGTCATGGCTCACTACACAAGGAGAGCCAAATGATCACTGCCGATATGTCTATT CTCTATGTTGAGAACGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; DeoR-Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; Transcription Regulator Protein; NB-Dependent Receptor; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Type; Regulatory Protein; Bacterial Regulatory Protein DeoR Family; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; HTH Domain-Containing; Regulatory Protein Deor; Helix-Turn-Helix Domain-Containing Protein; Deor Family Transcriptional Regulator; HTH Domain Protein; Deor-Family Transcriptional Regulator; Transcriptional Regulator-Like; Transcriptional Repressor
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYVLQSDYHLPPLMFDAHEVDAL ILGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINSPSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGT ASSRLVWPIALGFFDAVRVLACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY
Sequences:
>Translated_231_residues MTRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYVLQSDYHLPPLMFDAHEVDAL ILGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINSPSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGT ASSRLVWPIALGFFDAVRVLACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY >Mature_230_residues TRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYVLQSDYHLPPLMFDAHEVDALI LGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINSPSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGTA SSRLVWPIALGFFDAVRVLACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26376; Mature: 26245
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYV CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LQSDYHLPPLMFDAHEVDALILGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINS EECCCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGTASSRLVWPIALGFFDAVRVL CCEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHH ACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure TRTQRLLELLQLLRSYRYPVTAMTLAERLDVSVRSIYRDIETLKMQGVDIEGSAGIGYV CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE LQSDYHLPPLMFDAHEVDALILGLHWVMRHTDPQLEAAARNAVAKIHAILPENLAQQINS EECCCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSLMVAPTGNEGSLRFLTDIRSAIHQRRKLELVYTDKDGTASSRLVWPIALGFFDAVRVL CCEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHH ACWCELRQAFRHFRIDRMQQVAISEQLCPQSRYKLLKEWKSAEGIAQAKTY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA