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Identifier: 15679785

GI number: 15679785

Start: 1642429

End: 1642842

Strand: Direct

Name: Not Available

Synonym: MTH1797

Alternate gene names: 15679785

Gene position: 1642429-1642842 (Clockwise)

Preceding gene: 15679784

Following gene: 15679789

Centisome position: 93.78

GC content: 51.93

Gene sequence:

>414_bases
ATGAGTGACATGGAAATAAGGATAAGGCCCGTCGGGGTTGTAAGGTCACCCTTCAAGACCAGGAGCGATGCACCGGCACA
GGGAAGGTTTTCCAGCGAGGAAAGTGAGATCCACATCTTTCCAGAGTACCTGGACGCGGTGGACGGTCTTGAACTCTTCA
GCCACATCTTTGTTTTATACTGGCTGCACCTCGCTGAGAGGAATGTTTTAAGGGTGGTACCCAGGGGTAAAAGGAAGAAG
AGGGGTGTTTTCTCTACAAGGGCTCCTGCGAGGCCCAACCCTGTGGGGCTCTGTCTTGTGGAGCTACTTGAGTGTGGGGA
GATACTGAGGGTCAGGGGCCTTGATGCCCTGGACGGTTCCCCGGTTATTGATATAAAACCATACTATGAGGATATAGATT
CACTGGGGTTCTGA

Upstream 100 bases:

>100_bases
AACTTGACAGGGTCCGGGAGGTTACCGGGAGGGTGTTTGCTGTTCCATGGATGCTTGGATCTGTTGACAGCGCACCCTGC
ACCGTTATAGCGGAGCTGAG

Downstream 100 bases:

>100_bases
TGGTTTTCTGAATGGTTCTTCAGCATCCGGGGGATATGGATTCACTGGGGTTCTGATGGTTTTCTGAATGGTTCTTCAAC
ATCCCTTACGAAGGGTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSDMEIRIRPVGVVRSPFKTRSDAPAQGRFSSEESEIHIFPEYLDAVDGLELFSHIFVLYWLHLAERNVLRVVPRGKRKK
RGVFSTRAPARPNPVGLCLVELLECGEILRVRGLDALDGSPVIDIKPYYEDIDSLGF

Sequences:

>Translated_137_residues
MSDMEIRIRPVGVVRSPFKTRSDAPAQGRFSSEESEIHIFPEYLDAVDGLELFSHIFVLYWLHLAERNVLRVVPRGKRKK
RGVFSTRAPARPNPVGLCLVELLECGEILRVRGLDALDGSPVIDIKPYYEDIDSLGF
>Mature_136_residues
SDMEIRIRPVGVVRSPFKTRSDAPAQGRFSSEESEIHIFPEYLDAVDGLELFSHIFVLYWLHLAERNVLRVVPRGKRKKR
GVFSTRAPARPNPVGLCLVELLECGEILRVRGLDALDGSPVIDIKPYYEDIDSLGF

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family

Homologues:

Organism=Homo sapiens, GI118600979, Length=134, Percent_Identity=35.8208955223881, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1786393, Length=137, Percent_Identity=42.3357664233577, Blast_Score=96, Evalue=9e-22,
Organism=Drosophila melanogaster, GI45552503, Length=134, Percent_Identity=36.5671641791045, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24586408, Length=134, Percent_Identity=36.5671641791045, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1797_METTH (O27825)

Other databases:

- EMBL:   AE000666
- PIR:   A69107
- RefSeq:   NP_276903.1
- ProteinModelPortal:   O27825
- SMR:   O27825
- STRING:   O27825
- GeneID:   1470882
- GenomeReviews:   AE000666_GR
- KEGG:   mth:MTH1797
- NMPDR:   fig|187420.1.peg.1758
- eggNOG:   arNOG11351
- HOGENOM:   HBG419053
- OMA:   FIGRIRT
- PhylomeDB:   O27825
- ProtClustDB:   CLSK2750678
- BioCyc:   MTHE187420:MTH1797-MONOMER
- InterPro:   IPR001378
- TIGRFAMs:   TIGR00104

Pfam domain/function: PF01980 UPF0066

EC number: NA

Molecular weight: Translated: 15524; Mature: 15393

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDMEIRIRPVGVVRSPFKTRSDAPAQGRFSSEESEIHIFPEYLDAVDGLELFSHIFVLY
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
WLHLAERNVLRVVPRGKRKKRGVFSTRAPARPNPVGLCLVELLECGEILRVRGLDALDGS
HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PVIDIKPYYEDIDSLGF
CEEECCHHHHHHHHCCC
>Mature Secondary Structure 
SDMEIRIRPVGVVRSPFKTRSDAPAQGRFSSEESEIHIFPEYLDAVDGLELFSHIFVLY
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
WLHLAERNVLRVVPRGKRKKRGVFSTRAPARPNPVGLCLVELLECGEILRVRGLDALDGS
HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PVIDIKPYYEDIDSLGF
CEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463