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Identifier: 15679480

GI number: 15679480

Start: 1340157

End: 1340435

Strand: Direct

Name: Not Available

Synonym: MTH1483

Alternate gene names: 15679480

Gene position: 1340157-1340435 (Clockwise)

Preceding gene: 15679479

Following gene: 15679486

Centisome position: 76.52

GC content: 45.52

Gene sequence:

>279_bases
GTGATGTCAGAGGAGAATGTAGTATACATCGGAAACAAGCCTGTAATGAACTATGTTCTGGCCGTGGTTACTCAGATGAA
CGGTGGGACCAGTGAAGTGATCCTTAAAGCCCGTGGAATAGCCATAAGCCGGGCTGTTGACGTTGCAGAGATTGTAAGGA
ACCGCTTCATACCAGACATACAGATAGAGAACATCGACATATGCACAGAGGAGATCATTGGTAACGAGGGAACCGCTACC
AATGTTTCAGCAATAGAAATTCAGCTCCGAAAGGATTAA

Upstream 100 bases:

>100_bases
TATGGGGATCATGATTGTTATTAAATTTTTCAGTTACCATATCACAAAGTTTATATAATCTTGGGTTTCTATCTTTATTA
CAGACACTCTTGGAGGTTAA

Downstream 100 bases:

>100_bases
AAATATAAAAGATGGAAGCCACAGGTTTCCATTTTTTATATTTTATTATCAAAGGTTGCAGTGACCTCTGATTAATCATT
TAAGGGTTTTTACGTGCAGT

Product: DNA/RNA-binding protein albA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MMSEENVVYIGNKPVMNYVLAVVTQMNGGTSEVILKARGIAISRAVDVAEIVRNRFIPDIQIENIDICTEEIIGNEGTAT
NVSAIEIQLRKD

Sequences:

>Translated_92_residues
MMSEENVVYIGNKPVMNYVLAVVTQMNGGTSEVILKARGIAISRAVDVAEIVRNRFIPDIQIENIDICTEEIIGNEGTAT
NVSAIEIQLRKD
>Mature_92_residues
MMSEENVVYIGNKPVMNYVLAVVTQMNGGTSEVILKARGIAISRAVDVAEIVRNRFIPDIQIENIDICTEEIIGNEGTAT
NVSAIEIQLRKD

Specific function: Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May

COG id: COG1581

COG function: function code K; Archaeal DNA-binding protein

Gene ontology:

Cell location: Cytoplasm (Probable). Chromosome (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like Alba family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013795
- InterPro:   IPR002775 [H]

Pfam domain/function: PF01918 Alba [H]

EC number: NA

Molecular weight: Translated: 10107; Mature: 10107

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSEENVVYIGNKPVMNYVLAVVTQMNGGTSEVILKARGIAISRAVDVAEIVRNRFIPDI
CCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCEEEEHHHHHHHHHHHHCCCCE
QIENIDICTEEIIGNEGTATNVSAIEIQLRKD
EECCCCEEHHHHCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MMSEENVVYIGNKPVMNYVLAVVTQMNGGTSEVILKARGIAISRAVDVAEIVRNRFIPDI
CCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCEEEEHHHHHHHHHHHHCCCCE
QIENIDICTEEIIGNEGTATNVSAIEIQLRKD
EECCCCEEHHHHCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]