Definition Methanothermobacter thermautotrophicus str. Delta H chromosome, complete genome.
Accession NC_000916
Length 1,751,377

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15679371

GI number: 15679371

Start: 1235655

End: 1236779

Strand: Direct

Name: Not Available

Synonym: MTH1372

Alternate gene names: 15679371

Gene position: 1235655-1236779 (Clockwise)

Preceding gene: 15679370

Following gene: 15679376

Centisome position: 70.55

GC content: 51.82

Gene sequence:

>1125_bases
ATGAAACTGAAAGCACTGGCACTTAAGGAGGCCCGTGATATATTCTCCAACAGGATCTACATGCTTCTCATCCTCGTTCA
GGTCATAATAATACTGGGGGCCTATGGACTCGCCATTGTGAGCTCGGTTGCTGCCGACCCCCAGCTGATAGAGAGGTGGG
GTGGTTCAGGTTTCCTGAAGGTCGGTGTGGTTGATGGTGACGGGCTCCTCACTGAGGGCCTTGAAAGGGAGGGTCTCAGT
GTAAGGGAATTCAGTGACATTGAGAGCGCCAGGAAGAGCCTTGGATCAGAGGTTGTGGCCATCGTCTACCTGAGTGGAGG
AGACGTGAGGATAGAGGCCGACACCTCCAGCGTGTTCTACACAATCATGAGCGAAAGGCTTCAGGGCGCAGCTTCATGGT
ATATAAGTCAGAAAAGGTTCAGGGAGTCTGGACTCCCGGCCGGGACAATCCAGGCCCTTGAGGAACCTGTGAAGCTTAAG
GTTGTCCCCATCAGGAGGGAGGACTACAGGCCCCTTGCCCTTGAGAGCTCCTACTTTGTGGAGATAATGTACGGCTTCAT
CCTCCCCTTCGTTGTCTTCCTCCCCTTCTTCCTGGGGAGCAACATGGTAACGGACAGTGTCGTGGGAGAGAAGGAGCGGA
AGACCTTTGAGGTGCTGCTCATGGTACCCCTCTCCGAGACCATGATAATCCTCGGTAAGATACTGCCATCACTGGTATTC
TCATTTATCCAGAGCATGCTCTGGCTTGGACTCCTGGTCCTTCTGAGGGTACCTGTGTATAACATGCCATTACTGGCCCT
TCTCCTCCTCATTACAGGTCTTGGATTCATTGGTGTGGGTCTGTTCATATCAATCCTTGCAGACAGCACAAAGGAGGCCA
ACTCAGCAATTACCGTTGTACTCTTCTTTGCAACCTTTATCCTCTTTGTGCCGCTCTTCATGGATATGGGTGCCCTCAAC
CCCCTAATAAGGTTCATACCCAGCCTGCTAATTGTTAAAATGTCATCAGGACCCCACCTGGACCCCGGGATTATCTATGA
CATGGTACCATCTACAGTTTTCTCGGTGCTCATATTCCTGGCAGCCGTTGTCTCCTTCAGAAGGGAGGGCGTTATAAGGC
TCTGA

Upstream 100 bases:

>100_bases
TACTCAGCATCATATTCTATGGCCTTGCAGTCAGGCTGTTCGGGAGGGATGATGTGGTATTCGGTCCCAGACCAGGTATA
CTGAGGTTAATGGTGAAACC

Downstream 100 bases:

>100_bases
ACAGAAAAACCTCTCAAAACTGAATATCGCTTATAAACTTAACATAAACTGAAAATAACTAATTGTGTCCCGGTGTAAGG
ACATTTAAATCAGTAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKLKALALKEARDIFSNRIYMLLILVQVIIILGAYGLAIVSSVAADPQLIERWGGSGFLKVGVVDGDGLLTEGLEREGLS
VREFSDIESARKSLGSEVVAIVYLSGGDVRIEADTSSVFYTIMSERLQGAASWYISQKRFRESGLPAGTIQALEEPVKLK
VVPIRREDYRPLALESSYFVEIMYGFILPFVVFLPFFLGSNMVTDSVVGEKERKTFEVLLMVPLSETMIILGKILPSLVF
SFIQSMLWLGLLVLLRVPVYNMPLLALLLLITGLGFIGVGLFISILADSTKEANSAITVVLFFATFILFVPLFMDMGALN
PLIRFIPSLLIVKMSSGPHLDPGIIYDMVPSTVFSVLIFLAAVVSFRREGVIRL

Sequences:

>Translated_374_residues
MKLKALALKEARDIFSNRIYMLLILVQVIIILGAYGLAIVSSVAADPQLIERWGGSGFLKVGVVDGDGLLTEGLEREGLS
VREFSDIESARKSLGSEVVAIVYLSGGDVRIEADTSSVFYTIMSERLQGAASWYISQKRFRESGLPAGTIQALEEPVKLK
VVPIRREDYRPLALESSYFVEIMYGFILPFVVFLPFFLGSNMVTDSVVGEKERKTFEVLLMVPLSETMIILGKILPSLVF
SFIQSMLWLGLLVLLRVPVYNMPLLALLLLITGLGFIGVGLFISILADSTKEANSAITVVLFFATFILFVPLFMDMGALN
PLIRFIPSLLIVKMSSGPHLDPGIIYDMVPSTVFSVLIFLAAVVSFRREGVIRL
>Mature_374_residues
MKLKALALKEARDIFSNRIYMLLILVQVIIILGAYGLAIVSSVAADPQLIERWGGSGFLKVGVVDGDGLLTEGLEREGLS
VREFSDIESARKSLGSEVVAIVYLSGGDVRIEADTSSVFYTIMSERLQGAASWYISQKRFRESGLPAGTIQALEEPVKLK
VVPIRREDYRPLALESSYFVEIMYGFILPFVVFLPFFLGSNMVTDSVVGEKERKTFEVLLMVPLSETMIILGKILPSLVF
SFIQSMLWLGLLVLLRVPVYNMPLLALLLLITGLGFIGVGLFISILADSTKEANSAITVVLFFATFILFVPLFMDMGALN
PLIRFIPSLLIVKMSSGPHLDPGIIYDMVPSTVFSVLIFLAAVVSFRREGVIRL

Specific function: Unknown

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41232; Mature: 41232

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKALALKEARDIFSNRIYMLLILVQVIIILGAYGLAIVSSVAADPQLIERWGGSGFLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
VGVVDGDGLLTEGLEREGLSVREFSDIESARKSLGSEVVAIVYLSGGDVRIEADTSSVFY
EEEECCCCHHHHCHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCHHHHH
TIMSERLQGAASWYISQKRFRESGLPAGTIQALEEPVKLKVVPIRREDYRPLALESSYFV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCEEECCHHHH
EIMYGFILPFVVFLPFFLGSNMVTDSVVGEKERKTFEVLLMVPLSETMIILGKILPSLVF
HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCEEEEEEEECCHHHHHHHHHHHHHHHH
SFIQSMLWLGLLVLLRVPVYNMPLLALLLLITGLGFIGVGLFISILADSTKEANSAITVV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LFFATFILFVPLFMDMGALNPLIRFIPSLLIVKMSSGPHLDPGIIYDMVPSTVFSVLIFL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
AAVVSFRREGVIRL
HHHHHHHHCCCCCC
>Mature Secondary Structure
MKLKALALKEARDIFSNRIYMLLILVQVIIILGAYGLAIVSSVAADPQLIERWGGSGFLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
VGVVDGDGLLTEGLEREGLSVREFSDIESARKSLGSEVVAIVYLSGGDVRIEADTSSVFY
EEEECCCCHHHHCHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCHHHHH
TIMSERLQGAASWYISQKRFRESGLPAGTIQALEEPVKLKVVPIRREDYRPLALESSYFV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCEEECCHHHH
EIMYGFILPFVVFLPFFLGSNMVTDSVVGEKERKTFEVLLMVPLSETMIILGKILPSLVF
HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCEEEEEEEECCHHHHHHHHHHHHHHHH
SFIQSMLWLGLLVLLRVPVYNMPLLALLLLITGLGFIGVGLFISILADSTKEANSAITVV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LFFATFILFVPLFMDMGALNPLIRFIPSLLIVKMSSGPHLDPGIIYDMVPSTVFSVLIFL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
AAVVSFRREGVIRL
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA