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Identifier: 15679105

GI number: 15679105

Start: 1010511

End: 1011923

Strand: Direct

Name: Not Available

Synonym: MTH1094

Alternate gene names: 15679105

Gene position: 1010511-1011923 (Clockwise)

Preceding gene: 15679086

Following gene: 15679106

Centisome position: 57.7

GC content: 53.86

Gene sequence:

>1413_bases
ATGGATTTTGAGAACATTGAGAAGGCCCCTACCGGAATAAAGGGCCTTGATATGATTACTGAGGGTGGTTTTCCAAGGGG
TCGTAACACGCTGATATATGGGGGTCCCGGGACAGGGAAGACTTTCATTGCAATGGAGTTCCTGCTTAAGGGTGCATCGG
TCTATGGAGAGCCCGGTGTCATGGTGAGCTTCGATGAAGCCATGGAAAACCTCATTGAGAACTTCAGATCATCGGACAGG
CTTCTTGAAAGGCTTATTGATGAGGGCCTGCTCTTCATAGAGGATGCTTCCAGGGGTATGGACCCGGATGCGGGGTCCTA
CAGCCTTGAGGCCCTGAAGCTCCGGCTTGAGGATGCCATAAGGAGGACAGGTGCCAGGCGGGTGGTCCTGGATAAGGTAG
ATAATCTCTTTGATGGCACTGAAAGGCAGGGAATGATTGGCTTCGAACTCAGGGAACTCATAAGGTGGCTGAATGGCATG
GGGGTTACCAGCGTATTCACCTCAGGGGATTATGGTGGTTCCCCAACCCATAGGCTTGAGGAGTACATATCCGACTGTGT
TATCCACCTGACACACACCTTTGAGGGACAGGTGGGTACAAGGCACCTGAGGATAGTGAAGTACCGTGGATCAGGCCACG
GCCTGAACAGGTACCCCTTCATTATAACCCGGCGCGGTGCATCCATATTCCCCATCACCTCCATCAGCCTTGATTACAGT
GTGAGCAGGGAACTTGTATCAACAGGAATCCCTACCCTGGATGAGATGCTCGGTGGGGGCGTGTACAGGGGGTCAGCAGT
GCTCGTATCAGGTACCACCGGGGCCGGTAAGACCAGCCTGCTCTCGAAGTTTGCCTATGAGTCATGCAGGAGGGGGGAGA
GGTGCCTATTCTTTTCCAATGAGGAACCCGCTGACCAGATAGTCCGCAACATGGAATCCATAGGCATCAAACTTGGTGAG
TTCCTGGGCGATAAGCTACTCATACACTCTGACCGCCCCACATCCCTTGGCCTTGAGGCCCACCTCACATACATGCAGGA
CCTTATCATGGACTTCAACCCGGACAGTGTTCTGGTCGACCCGGTCACCGGGCTGGCAGGGGCTGGTGGGAGCCCTGAAA
CCCGGAATGAGAATGCTAAGCACCTCTTCATAAGGTTAACGGATTTCCTCAAAGGCAGGGGGATCACCTCAATATTCAGC
TATCTGATAGCCTCGCCCTTCACCGCGACAACGACTGAGCTTAAACTCTCCTCCCTGATAGACACCTGGATCGTCCTTGA
GAGCATCCGGGCCAACGGAGAGTACCGGAGGTCCCTCAGGATACTCAAGAGCAGGGGTATGAACCATTCAAGCAGCGTCG
CCGAGGTCAGATTCACAGACAGGGGTATACTCATCAAGGGGGGCTCCTGGTGA

Upstream 100 bases:

>100_bases
CCATCCAAATCCTCCGCGACCCTGAAGCATCGGGTATTATGGTTAGATTTTTATCCCTGATAGTATAAATTGTTATAGTG
ATGCTGTGGAGGGTGCATGA

Downstream 100 bases:

>100_bases
AGGCTGGGGGTGTTATCTGATGATAAGGCTGCGCTCTATGTAACCGGGGATAGCCTCTCAGAGAGGGCCCTTGAAAACCT
CATGGATGTCATTGATGATA

Product: circadian clock protein KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MDFENIEKAPTGIKGLDMITEGGFPRGRNTLIYGGPGTGKTFIAMEFLLKGASVYGEPGVMVSFDEAMENLIENFRSSDR
LLERLIDEGLLFIEDASRGMDPDAGSYSLEALKLRLEDAIRRTGARRVVLDKVDNLFDGTERQGMIGFELRELIRWLNGM
GVTSVFTSGDYGGSPTHRLEEYISDCVIHLTHTFEGQVGTRHLRIVKYRGSGHGLNRYPFIITRRGASIFPITSISLDYS
VSRELVSTGIPTLDEMLGGGVYRGSAVLVSGTTGAGKTSLLSKFAYESCRRGERCLFFSNEEPADQIVRNMESIGIKLGE
FLGDKLLIHSDRPTSLGLEAHLTYMQDLIMDFNPDSVLVDPVTGLAGAGGSPETRNENAKHLFIRLTDFLKGRGITSIFS
YLIASPFTATTTELKLSSLIDTWIVLESIRANGEYRRSLRILKSRGMNHSSSVAEVRFTDRGILIKGGSW

Sequences:

>Translated_470_residues
MDFENIEKAPTGIKGLDMITEGGFPRGRNTLIYGGPGTGKTFIAMEFLLKGASVYGEPGVMVSFDEAMENLIENFRSSDR
LLERLIDEGLLFIEDASRGMDPDAGSYSLEALKLRLEDAIRRTGARRVVLDKVDNLFDGTERQGMIGFELRELIRWLNGM
GVTSVFTSGDYGGSPTHRLEEYISDCVIHLTHTFEGQVGTRHLRIVKYRGSGHGLNRYPFIITRRGASIFPITSISLDYS
VSRELVSTGIPTLDEMLGGGVYRGSAVLVSGTTGAGKTSLLSKFAYESCRRGERCLFFSNEEPADQIVRNMESIGIKLGE
FLGDKLLIHSDRPTSLGLEAHLTYMQDLIMDFNPDSVLVDPVTGLAGAGGSPETRNENAKHLFIRLTDFLKGRGITSIFS
YLIASPFTATTTELKLSSLIDTWIVLESIRANGEYRRSLRILKSRGMNHSSSVAEVRFTDRGILIKGGSW
>Mature_470_residues
MDFENIEKAPTGIKGLDMITEGGFPRGRNTLIYGGPGTGKTFIAMEFLLKGASVYGEPGVMVSFDEAMENLIENFRSSDR
LLERLIDEGLLFIEDASRGMDPDAGSYSLEALKLRLEDAIRRTGARRVVLDKVDNLFDGTERQGMIGFELRELIRWLNGM
GVTSVFTSGDYGGSPTHRLEEYISDCVIHLTHTFEGQVGTRHLRIVKYRGSGHGLNRYPFIITRRGASIFPITSISLDYS
VSRELVSTGIPTLDEMLGGGVYRGSAVLVSGTTGAGKTSLLSKFAYESCRRGERCLFFSNEEPADQIVRNMESIGIKLGE
FLGDKLLIHSDRPTSLGLEAHLTYMQDLIMDFNPDSVLVDPVTGLAGAGGSPETRNENAKHLFIRLTDFLKGRGITSIFS
YLIASPFTATTTELKLSSLIDTWIVLESIRANGEYRRSLRILKSRGMNHSSSVAEVRFTDRGILIKGGSW

Specific function: May Play A Role In The Repair Of Endogenous Alkylation Damage. [C]

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 51843; Mature: 51843

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFENIEKAPTGIKGLDMITEGGFPRGRNTLIYGGPGTGKTFIAMEFLLKGASVYGEPGV
CCCHHHHCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCC
MVSFDEAMENLIENFRSSDRLLERLIDEGLLFIEDASRGMDPDAGSYSLEALKLRLEDAI
EEEHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
RRTGARRVVLDKVDNLFDGTERQGMIGFELRELIRWLNGMGVTSVFTSGDYGGSPTHRLE
HHCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
EYISDCVIHLTHTFEGQVGTRHLRIVKYRGSGHGLNRYPFIITRRGASIFPITSISLDYS
HHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEEECHH
VSRELVSTGIPTLDEMLGGGVYRGSAVLVSGTTGAGKTSLLSKFAYESCRRGERCLFFSN
HHHHHHHCCCCHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECC
EEPADQIVRNMESIGIKLGEFLGDKLLIHSDRPTSLGLEAHLTYMQDLIMDFNPDSVLVD
CCCHHHHHHHHHHHCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
PVTGLAGAGGSPETRNENAKHLFIRLTDFLKGRGITSIFSYLIASPFTATTTELKLSSLI
CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
DTWIVLESIRANGEYRRSLRILKSRGMNHSSSVAEVRFTDRGILIKGGSW
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCC
>Mature Secondary Structure
MDFENIEKAPTGIKGLDMITEGGFPRGRNTLIYGGPGTGKTFIAMEFLLKGASVYGEPGV
CCCHHHHCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCC
MVSFDEAMENLIENFRSSDRLLERLIDEGLLFIEDASRGMDPDAGSYSLEALKLRLEDAI
EEEHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
RRTGARRVVLDKVDNLFDGTERQGMIGFELRELIRWLNGMGVTSVFTSGDYGGSPTHRLE
HHCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
EYISDCVIHLTHTFEGQVGTRHLRIVKYRGSGHGLNRYPFIITRRGASIFPITSISLDYS
HHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEEECHH
VSRELVSTGIPTLDEMLGGGVYRGSAVLVSGTTGAGKTSLLSKFAYESCRRGERCLFFSN
HHHHHHHCCCCHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECC
EEPADQIVRNMESIGIKLGEFLGDKLLIHSDRPTSLGLEAHLTYMQDLIMDFNPDSVLVD
CCCHHHHHHHHHHHCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
PVTGLAGAGGSPETRNENAKHLFIRLTDFLKGRGITSIFSYLIASPFTATTTELKLSSLI
CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
DTWIVLESIRANGEYRRSLRILKSRGMNHSSSVAEVRFTDRGILIKGGSW
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]