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Identifier: 15678293

GI number: 15678293

Start: 204400

End: 204582

Strand: Direct

Name: Not Available

Synonym: MTH265

Alternate gene names: 15678293

Gene position: 204400-204582 (Clockwise)

Preceding gene: 15678292

Following gene: 15678294

Centisome position: 11.67

GC content: 49.73

Gene sequence:

>183_bases
ATGACTGAGAAGGCATGCACAAGGTGTAAGAGAATCACCAGTGACGAAAGATGCCCGGTCTGCAATGTCCCGGCATCCAC
CAACTGGAGCGGACTCCTCATAATAATAGATCCGGATAAATCAGATATAGCCAGGGAGCTCAACATAACACTGCCTGGTG
AATACGCGCTGAGGGTCAGATAG

Upstream 100 bases:

>100_bases
TCAAGGGCCGAAGAGAGGGCGTAAAGGTGGGCCTCACCATGAGGCAGCCCGGCCTTGGAAAATTCGAATGGATTGAAGAA
GAGAAGAGGAAGAGTAAAAA

Downstream 100 bases:

>100_bases
TGTACATACTGCCGGAGGAACTGAGGGCGGAGCTCAAAAGGCCACTTGGAGAGCTCCACAGGTCATTCAGTGACGTTGAT
GTGGGGAACTCATTCCTCAT

Product: DNA-dependent RNA polymerase, subunit E''

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MTEKACTRCKRITSDERCPVCNVPASTNWSGLLIIIDPDKSDIARELNITLPGEYALRVR

Sequences:

>Translated_60_residues
MTEKACTRCKRITSDERCPVCNVPASTNWSGLLIIIDPDKSDIARELNITLPGEYALRVR
>Mature_59_residues
TEKACTRCKRITSDERCPVCNVPASTNWSGLLIIIDPDKSDIARELNITLPGEYALRVR

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]

COG id: COG2093

COG function: function code K; DNA-directed RNA polymerase, subunit E''

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007178
- InterPro:   IPR022800
- ProDom:   PD019197 [H]

Pfam domain/function: PF06093 Spt4 [H]

EC number: =2.7.7.6 [H]

Molecular weight: Translated: 6735; Mature: 6604

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKACTRCKRITSDERCPVCNVPASTNWSGLLIIIDPDKSDIARELNITLPGEYALRVR
CCHHHHHHHHHCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure 
TEKACTRCKRITSDERCPVCNVPASTNWSGLLIIIDPDKSDIARELNITLPGEYALRVR
CHHHHHHHHHCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]