Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

Click here to switch to the map view.

The map label for this gene is yxcE

Identifier: 15674225

GI number: 15674225

Start: 2329167

End: 2329913

Strand: Reverse

Name: yxcE

Synonym: L112616

Alternate gene names: NA

Gene position: 2329913-2329167 (Counterclockwise)

Preceding gene: 15674226

Following gene: 15674223

Centisome position: 98.49

GC content: 32.53

Gene sequence:

>747_bases
ATGAGTAAAATGGATAATGAAAAATTAGACCACTTGATTTTAGAAACGTGGACAGATTTTATTGACTTAAAAAATAAGGC
TGAGCTGTCAGAAGTTTTGATTCCAAATAGTATGCCACTTTTGTGGTTTGGTGACTTAGCCAAATATGAAAAATCAGACT
TAAAAATACTGACGGTCAGTAAAAATGCTTCTTATGCAGAATTTGGTGAAAATCAACGTTATGAAAAATTACTGACAGAA
TTTTCGTCAGTAAATTTGGAAACTTACAAGTCAAATCTCAATCGGTATTTTGAATACAATCCTAGTCCTTGGTTCAATCA
GTTAGCAAAATTTTTACCTGTTTTTGATTCAGCTTATAAAGAATCTGAAAATCAAATTAATCGAGCCTTACATATTGATT
TGTTTACCCCAATTGCGACACATCCAGTTTGGCCAGGTTTAGCTAAGAGCCAACAAGAACAATTCAAGATGAAATTTCCG
CAACTTTTGCAACTTTTAGAACCAGATGTTTTACTGACAAGTCTGTCAGTAAGTAATTTAAAAATTTTACTTAAAAATGC
TGGAACTGAAATCGAAGAAATATTTGATAAAGAAGAAGTAGGAAAAGCTGCCAAATACGTTCGAGCTTATCGTGTCGATA
AAAAATTAATCGTGATTAACGGTCGAAACTTTCAAGGAACTTATTTCGGTGGAATGACTGACCAGTTTGTTAGAAAATGT
CTGACAGAAATTAAAGGGATGATTTGA

Upstream 100 bases:

>100_bases
TTTTAGAAGTGGCTAGAAAAGAAGCAGTTGAAATTTTTAAAAATGCAGATGAGTTTCCTGATTTGATTGCTCAAGTTAAT
GTTGACGGGGGCTTTGATTG

Downstream 100 bases:

>100_bases
TGATTGACCAATTTCTGTCAGTAAAAAAAAGAGTTCATTTGAACTCTTTTTTATTTTCCCAAACAAAATTGTGAAAAAAG
TTGTGTAATCAATTCATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSKMDNEKLDHLILETWTDFIDLKNKAELSEVLIPNSMPLLWFGDLAKYEKSDLKILTVSKNASYAEFGENQRYEKLLTE
FSSVNLETYKSNLNRYFEYNPSPWFNQLAKFLPVFDSAYKESENQINRALHIDLFTPIATHPVWPGLAKSQQEQFKMKFP
QLLQLLEPDVLLTSLSVSNLKILLKNAGTEIEEIFDKEEVGKAAKYVRAYRVDKKLIVINGRNFQGTYFGGMTDQFVRKC
LTEIKGMI

Sequences:

>Translated_248_residues
MSKMDNEKLDHLILETWTDFIDLKNKAELSEVLIPNSMPLLWFGDLAKYEKSDLKILTVSKNASYAEFGENQRYEKLLTE
FSSVNLETYKSNLNRYFEYNPSPWFNQLAKFLPVFDSAYKESENQINRALHIDLFTPIATHPVWPGLAKSQQEQFKMKFP
QLLQLLEPDVLLTSLSVSNLKILLKNAGTEIEEIFDKEEVGKAAKYVRAYRVDKKLIVINGRNFQGTYFGGMTDQFVRKC
LTEIKGMI
>Mature_247_residues
SKMDNEKLDHLILETWTDFIDLKNKAELSEVLIPNSMPLLWFGDLAKYEKSDLKILTVSKNASYAEFGENQRYEKLLTEF
SSVNLETYKSNLNRYFEYNPSPWFNQLAKFLPVFDSAYKESENQINRALHIDLFTPIATHPVWPGLAKSQQEQFKMKFPQ
LLQLLEPDVLLTSLSVSNLKILLKNAGTEIEEIFDKEEVGKAAKYVRAYRVDKKLIVINGRNFQGTYFGGMTDQFVRKCL
TEIKGMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28740; Mature: 28609

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMDNEKLDHLILETWTDFIDLKNKAELSEVLIPNSMPLLWFGDLAKYEKSDLKILTVS
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCHHHHCCCCEEEEEEE
KNASYAEFGENQRYEKLLTEFSSVNLETYKSNLNRYFEYNPSPWFNQLAKFLPVFDSAYK
CCCCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH
ESENQINRALHIDLFTPIATHPVWPGLAKSQQEQFKMKFPQLLQLLEPDVLLTSLSVSNL
HHHHHHHHEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
KILLKNAGTEIEEIFDKEEVGKAAKYVRAYRVDKKLIVINGRNFQGTYFGGMTDQFVRKC
HHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCHHHHHHH
LTEIKGMI
HHHHHCCC
>Mature Secondary Structure 
SKMDNEKLDHLILETWTDFIDLKNKAELSEVLIPNSMPLLWFGDLAKYEKSDLKILTVS
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCHHHHCCCCEEEEEEE
KNASYAEFGENQRYEKLLTEFSSVNLETYKSNLNRYFEYNPSPWFNQLAKFLPVFDSAYK
CCCCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH
ESENQINRALHIDLFTPIATHPVWPGLAKSQQEQFKMKFPQLLQLLEPDVLLTSLSVSNL
HHHHHHHHEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
KILLKNAGTEIEEIFDKEEVGKAAKYVRAYRVDKKLIVINGRNFQGTYFGGMTDQFVRKC
HHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCHHHHHHH
LTEIKGMI
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA