| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yxaA
Identifier: 15674200
GI number: 15674200
Start: 2300033
End: 2300884
Strand: Reverse
Name: yxaA
Synonym: L83481
Alternate gene names: NA
Gene position: 2300884-2300033 (Counterclockwise)
Preceding gene: 15674203
Following gene: 15674199
Centisome position: 97.26
GC content: 37.56
Gene sequence:
>852_bases ATGTCTTTATTAGTATTTACTCTGTTGATGTTACTTCTTGGTTTCGTTGCAGGGGTATTTGGCTCAATTTTGGGTCTTGG GGGTGGAATTATTATCACGCCTATTATTACGACATTTTTTGGTGTTGATATTAAATATGCCATTGGGGCAAGTATTGTTG CCGTTATTGCAACAAGTTCTGGTGCGGCCATTTCTTATCTGAAAGATGATATGATTAATGTTCGTACCGCTATGTTTTTG GAAATATTTACCACAATTGGTGGTTTAGTTGGTGCAATTTTAGCAGGATTTTTTGATGCTACGATTTTAAATATTTTATT TGGTTGTCTTTTGATTTTCCAAGGCTACAATATGTGGCGGAAAATGCATAAAGGTGAGGAAGTTGTTCAAAAGGTTGAGT CAGATAAGATAGCTGAGAAGTTAAAATTAAACTCAAGCTATTACGATAAACAACTTGGCAAAGAAATTCCTTATCAAGTA GAAAAGGTTCCAGGTGGTGCTGCTGTAATGCTTGGTGCTGGTGTTGCGTCAGGTCTTTTGGGAATTGGTTCTGGGGTCTT TAAGGTCATGGCAATGGATTCAATGATGAAAATGCCTTTAAAAGCTTCAACAGCGACTTCAAATTTGATGATTGGGGTAA CAGCAGCGGCTTCTGCAACGGTTTATTTTTTCAATGGCTATGTTAATCCAAGTTTAGCAGGTCCGCTTGCTATTGGGATT GTTGCCGGTGCAGCTTTGGGCTCAAAAATTATGCCTAAGTTACCAGCAAAAACAATTCGATTGATTTTCATTCCAGTTAT TTTAATTATGGCATTGCAAATGTTGCTTAAAGGATTGGGGGTATCGTTCTAA
Upstream 100 bases:
>100_bases AGAATAGGATTTAAATGTTCTTGATAAAGTATCTTAATCAAAGGAACAAGCAGCTTTAAAAAGTTTTTGGTAGAATAGGG TTATTAGATTGGAGAAACAC
Downstream 100 bases:
>100_bases TGGTAAATAAAGAATTAACAAAAGAAGAGTTACTCAAAATAGAGCGAAATATCGGAAAGATTCTTAGGATTGGTGTATTT GTTAGTACTACAGTCATTAT
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSLLVFTLLMLLLGFVAGVFGSILGLGGGIIITPIITTFFGVDIKYAIGASIVAVIATSSGAAISYLKDDMINVRTAMFL EIFTTIGGLVGAILAGFFDATILNILFGCLLIFQGYNMWRKMHKGEEVVQKVESDKIAEKLKLNSSYYDKQLGKEIPYQV EKVPGGAAVMLGAGVASGLLGIGSGVFKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYFFNGYVNPSLAGPLAIGI VAGAALGSKIMPKLPAKTIRLIFIPVILIMALQMLLKGLGVSF
Sequences:
>Translated_283_residues MSLLVFTLLMLLLGFVAGVFGSILGLGGGIIITPIITTFFGVDIKYAIGASIVAVIATSSGAAISYLKDDMINVRTAMFL EIFTTIGGLVGAILAGFFDATILNILFGCLLIFQGYNMWRKMHKGEEVVQKVESDKIAEKLKLNSSYYDKQLGKEIPYQV EKVPGGAAVMLGAGVASGLLGIGSGVFKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYFFNGYVNPSLAGPLAIGI VAGAALGSKIMPKLPAKTIRLIFIPVILIMALQMLLKGLGVSF >Mature_282_residues SLLVFTLLMLLLGFVAGVFGSILGLGGGIIITPIITTFFGVDIKYAIGASIVAVIATSSGAAISYLKDDMINVRTAMFLE IFTTIGGLVGAILAGFFDATILNILFGCLLIFQGYNMWRKMHKGEEVVQKVESDKIAEKLKLNSSYYDKQLGKEIPYQVE KVPGGAAVMLGAGVASGLLGIGSGVFKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYFFNGYVNPSLAGPLAIGIV AGAALGSKIMPKLPAKTIRLIFIPVILIMALQMLLKGLGVSF
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 29693; Mature: 29562
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLVFTLLMLLLGFVAGVFGSILGLGGGIIITPIITTFFGVDIKYAIGASIVAVIATSS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC GAAISYLKDDMINVRTAMFLEIFTTIGGLVGAILAGFFDATILNILFGCLLIFQGYNMWR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMHKGEEVVQKVESDKIAEKLKLNSSYYDKQLGKEIPYQVEKVPGGAAVMLGAGVASGLL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHH GIGSGVFKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYFFNGYVNPSLAGPLAIGI HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHEEEEEEECCCCCCHHHHHHHHH VAGAALGSKIMPKLPAKTIRLIFIPVILIMALQMLLKGLGVSF HHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLLVFTLLMLLLGFVAGVFGSILGLGGGIIITPIITTFFGVDIKYAIGASIVAVIATSS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC GAAISYLKDDMINVRTAMFLEIFTTIGGLVGAILAGFFDATILNILFGCLLIFQGYNMWR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMHKGEEVVQKVESDKIAEKLKLNSSYYDKQLGKEIPYQVEKVPGGAAVMLGAGVASGLL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHH GIGSGVFKVMAMDSMMKMPLKASTATSNLMIGVTAAASATVYFFNGYVNPSLAGPLAIGI HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHEEEEEEECCCCCCHHHHHHHHH VAGAALGSKIMPKLPAKTIRLIFIPVILIMALQMLLKGLGVSF HHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]