| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ywdA
Identifier: 15674138
GI number: 15674138
Start: 2232776
End: 2233273
Strand: Reverse
Name: ywdA
Synonym: L16221
Alternate gene names: NA
Gene position: 2233273-2232776 (Counterclockwise)
Preceding gene: 15674139
Following gene: 15674135
Centisome position: 94.41
GC content: 27.91
Gene sequence:
>498_bases TTGAAGAATCTTGAAGAGCTTCTTCAACTAAGAAAATCAAATAAATTTCATAATATTGGTGTAAATGTTGAAAGTGTAAT AGAAGTAGTAAAAAAATCCTACTATAATTTTGAGAAACATAGCGTTCCTTCTGCCGGAGCTATATATGGTTTGAAAGTTT TACTTTTTTATAAGACCAATAAAAAAATATTTAACTCTAAAGGGGAGATAAGTACAGAGAAATTCGAGATAAATCAAATT AAAAAAACTTGTTTTTATGATGATAAATATTTTTCTTCAAGTTCAATTCTTATTGCTGTGACATATGATTACGATAAATA TTTTGGTAAATATGGTAATTGTGGGATAAGGTATGCTTCAATCGAATGTGGTGCTTTTCTGCAAAATTTTCAACTACTAC TTTCAGAAAAAGAGATATACGGTTGTCCATTAGGCTTCGTAGATAATGATGCTCTGTTGGGAATAGAAGAACCCCTAATT TATTTTATTATTAATTAA
Upstream 100 bases:
>100_bases GGTTTTGATATTTTATTGGCAGTTCTTGAACAAGAAAGTGATAGAGAGTGGACAGATGATGAAGATGAATTTCTGAAAGA GTTAATCAAGGAGAAAATCG
Downstream 100 bases:
>100_bases TCTTTGATAAGATATCCGAAGTTTAGGATTCTTATATAACTATTTGGGCTCAAAATAGTACCATAATAAGGAGGAATTTT CATGAACAAAGAAACTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKNLEELLQLRKSNKFHNIGVNVESVIEVVKKSYYNFEKHSVPSAGAIYGLKVLLFYKTNKKIFNSKGEISTEKFEINQI KKTCFYDDKYFSSSSILIAVTYDYDKYFGKYGNCGIRYASIECGAFLQNFQLLLSEKEIYGCPLGFVDNDALLGIEEPLI YFIIN
Sequences:
>Translated_165_residues MKNLEELLQLRKSNKFHNIGVNVESVIEVVKKSYYNFEKHSVPSAGAIYGLKVLLFYKTNKKIFNSKGEISTEKFEINQI KKTCFYDDKYFSSSSILIAVTYDYDKYFGKYGNCGIRYASIECGAFLQNFQLLLSEKEIYGCPLGFVDNDALLGIEEPLI YFIIN >Mature_165_residues MKNLEELLQLRKSNKFHNIGVNVESVIEVVKKSYYNFEKHSVPSAGAIYGLKVLLFYKTNKKIFNSKGEISTEKFEINQI KKTCFYDDKYFSSSSILIAVTYDYDKYFGKYGNCGIRYASIECGAFLQNFQLLLSEKEIYGCPLGFVDNDALLGIEEPLI YFIIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18989; Mature: 18989
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLEELLQLRKSNKFHNIGVNVESVIEVVKKSYYNFEKHSVPSAGAIYGLKVLLFYKTN CCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCHHHCCCCCCHHEEEEEEEEEECC KKIFNSKGEISTEKFEINQIKKTCFYDDKYFSSSSILIAVTYDYDKYFGKYGNCGIRYAS CCEECCCCCCCCCEEHHHHHHHHHCCCCCEECCCCEEEEEEECHHHHCCCCCCCCEEEEE IECGAFLQNFQLLLSEKEIYGCPLGFVDNDALLGIEEPLIYFIIN EHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEECCCCEEEEEEC >Mature Secondary Structure MKNLEELLQLRKSNKFHNIGVNVESVIEVVKKSYYNFEKHSVPSAGAIYGLKVLLFYKTN CCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCHHHCCCCCCHHEEEEEEEEEECC KKIFNSKGEISTEKFEINQIKKTCFYDDKYFSSSSILIAVTYDYDKYFGKYGNCGIRYAS CCEECCCCCCCCCEEHHHHHHHHHCCCCCEECCCCEEEEEEECHHHHCCCCCCCCEEEEE IECGAFLQNFQLLLSEKEIYGCPLGFVDNDALLGIEEPLIYFIIN EHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA