| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yvgA
Identifier: 15674067
GI number: 15674067
Start: 2162827
End: 2163411
Strand: Reverse
Name: yvgA
Synonym: L146261
Alternate gene names: NA
Gene position: 2163411-2162827 (Counterclockwise)
Preceding gene: 15674068
Following gene: 15674066
Centisome position: 91.45
GC content: 34.19
Gene sequence:
>585_bases ATGGAAAAAACATCAGCTAATATTAAAAAGTTTGTGGTAATTAGCCTAATTACTTTAGGAACTTTAACTGTTTTAACGGC CTGTGGCAGTAAAGAAAGTAAAAAGTCTGAACAAAGCAGTTTCTCTTCGAGTATTAATAATAAAAGTAGTCAAAGTAGTA GTAGTTCAAATTCTTCAAGTACAAGTTCAAGTTCTTCCACTCAGGAAGGATTTGGAGATGTTCCACAAATTCTATCAGGG AATTATTCTTCCTTGAATGGAACTTGGCAGACTGCTGACGGGTCTACTAAAATTATTTTGAATAATGGCAATATCATTTT TAGTCCAGACTATGAGAGAATAATATCAAATCCGGTGGCTAAGGATGGAATAGTTATTGGTGATGCGTTGAATGATAAAA GGCATATGGGCTTTATGTTTGCCGCTGCCCACAATTCGCCAATATTTCCAAATTCCTCAAATGTGGATAAGACAGATTCA GGAAAAGACAGACTTATAATAACTACGGATGAAGAGGGAATAGAAATATTTGATACTATGCCAACAGCATTTTTTTACAA AGTAAGTAATGATATCACACTTTGA
Upstream 100 bases:
>100_bases GTAATTTTTTTTGTATCTTAGATAAATTATTAAAAGCTAGTCTATTATTGTGGATTAAAGGTATAGATTTGCTATAATGG TGAGGAAACGGGAGGAATTT
Downstream 100 bases:
>100_bases GCTCATAAGTTAAAACAAAATTACTGGCAATTCTGTCAGTAATTTTTATTCTATAAAAAACCATGACACACCCGAAAACA TTGTAAAGAAAAGTGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MEKTSANIKKFVVISLITLGTLTVLTACGSKESKKSEQSSFSSSINNKSSQSSSSSNSSSTSSSSSTQEGFGDVPQILSG NYSSLNGTWQTADGSTKIILNNGNIIFSPDYERIISNPVAKDGIVIGDALNDKRHMGFMFAAAHNSPIFPNSSNVDKTDS GKDRLIITTDEEGIEIFDTMPTAFFYKVSNDITL
Sequences:
>Translated_194_residues MEKTSANIKKFVVISLITLGTLTVLTACGSKESKKSEQSSFSSSINNKSSQSSSSSNSSSTSSSSSTQEGFGDVPQILSG NYSSLNGTWQTADGSTKIILNNGNIIFSPDYERIISNPVAKDGIVIGDALNDKRHMGFMFAAAHNSPIFPNSSNVDKTDS GKDRLIITTDEEGIEIFDTMPTAFFYKVSNDITL >Mature_194_residues MEKTSANIKKFVVISLITLGTLTVLTACGSKESKKSEQSSFSSSINNKSSQSSSSSNSSSTSSSSSTQEGFGDVPQILSG NYSSLNGTWQTADGSTKIILNNGNIIFSPDYERIISNPVAKDGIVIGDALNDKRHMGFMFAAAHNSPIFPNSSNVDKTDS GKDRLIITTDEEGIEIFDTMPTAFFYKVSNDITL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20760; Mature: 20760
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTSANIKKFVVISLITLGTLTVLTACGSKESKKSEQSSFSSSINNKSSQSSSSSNSSS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TSSSSSTQEGFGDVPQILSGNYSSLNGTWQTADGSTKIILNNGNIIFSPDYERIISNPVA CCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCEEEEEECCCEEECCCHHHHHCCCCC KDGIVIGDALNDKRHMGFMFAAAHNSPIFPNSSNVDKTDSGKDRLIITTDEEGIEIFDTM CCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECC PTAFFYKVSNDITL CCEEEEEECCCCCC >Mature Secondary Structure MEKTSANIKKFVVISLITLGTLTVLTACGSKESKKSEQSSFSSSINNKSSQSSSSSNSSS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TSSSSSTQEGFGDVPQILSGNYSSLNGTWQTADGSTKIILNNGNIIFSPDYERIISNPVA CCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCEEEEEECCCEEECCCHHHHHCCCCC KDGIVIGDALNDKRHMGFMFAAAHNSPIFPNSSNVDKTDSGKDRLIITTDEEGIEIFDTM CCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECC PTAFFYKVSNDITL CCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA