| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yujE
Identifier: 15674001
GI number: 15674001
Start: 2096910
End: 2098892
Strand: Reverse
Name: yujE
Synonym: L80344
Alternate gene names: NA
Gene position: 2098892-2096910 (Counterclockwise)
Preceding gene: 15674002
Following gene: 15674000
Centisome position: 88.73
GC content: 35.3
Gene sequence:
>1983_bases ATGCAGATGAAAAAACTAAAGTATGTTTTTCTGACTGTGGCTATTGTGTTAGTCACAGCCTTTTATGCTATAAGTATTGA GAATAAAAGTCAAGATATTATTGCAGACCGCCTTCCGCAAGGGGCTCTTGTCATGAATAACATCAATCAAAAGTCAACGC AGATTCCGAAGAATGAGCAGGTTGTTGCGACGTTAGATAACTATGCAATGAGTCATCAGTCATTCATTGTTTCTACAGTT GTTAGACCTGAGGGAAACGGGAGTTTTAAGCCGAGCTATATGACTTTTGGAGATGGGAAGCTTGCGAGTAATATGCGTTT ATTTCCTAAAGCTAATCGAGCTGAAAATGATTTACTGGGAATGGGAGCGACCTACCATATCATGACAGGTCATACGAGTT CTGAGGAACTGAGCAATTACTTGAGCAATAAATTTCACGTGATAGCTGTACCTGTTCAGCGATTGACAATCTTAGGAGAG TACTATAATATCTATGGTAATCCACAGGCTGTAACCTTATTGATAAGTATCTTTCTGGCTTTTGTCGGTTTAGCTATTTT TGTAAGAATCTCAGAGTTACGAAAATCAGGAATAGAGCTTTTGTCTGGAAAGACCTTGTTGAATACTGTATTTTCAGATA GTATTCGTGATATAAAGTTTATCTCAATTTTGACGATTATTGCTATGATAGGGACTTCTAGTTACTTGCTCATAACTGGT CTAAGCAACCTGTCGCTTCACATTTTTGCTTTATTTTCTATCCTCTTTTCTTCTTTGATATTTATGCTACTGTCATGCTT AGTAAGTGCAATAATCATGCTTATCCTCTCTCGGAGTCAACTCAATTCACTTATTAAAGGAAAATTGCCGACAACAGTTT TGATGGTTCTTGTGGTTTTGATGCAATTTGTTGTGAGTATTGTCCTTGTCACAAGCCTATCAGGAATTCACTATAATCAA ATCGAATTAAAAAAACAGGACGCTGATTTAGACAAATGGAAGCAACAAAAAGATTATGACACGATTTCTGGTGCACCAAA TCTTAAGGTTAGCTCTCAGGAAGTAGAAGCATGGTGGAACTTTTATAATATTGAAGTAACGAAAGATGATGCGATATTCG TTAGACATAATTTGTTTGATGGACCAGAAGAAAGTAGCGACGAACAACTCATTGTCACACCAAGTTATCTGAAAGCACAA CATATAAATGTTAAAGAAGACTTTTCTAATCTCAAACTTGGAGAATATGGACTCCTGATACCAAAAAATCAAATGAAAAA TCGTCAAAAATTGATTGCTCAGTACGACAAACTATTGACGGAAACAACACAAAATGGCAAAAAAGAGACCAAGATGAAGG CGAAATACGTTGAAGAAGTACCAAATGGCGAAAAACGTTTTATTTACAATGTGGCTTATGAGAAAATGACAACGCAACAA GAAATCTCTGACCCAATTATTGTTGTGATAACACCGCAATCATCAGGAGAAGAAACGGGCATATCATGGGCAGGGGATAA TGATTACTTTTTTGTGAAAGGTAAAGAACAAACGCTTAATAGGCTGAAAGAGTTGGGACTATACGATAAGGTTCATTATT TAGTTAATGCCTATGGACAGTATGAAGCACAGACAAATCTTGTAAAAGAGAGTTTAAGTATGGCAATCATATCAGCCATT ATAACGATTATTGTCATTAGCTTTTTCTATATTTTACTCCATGTCCTTTACTTTACTCATTTCAGAAGAACAATCGTAAT AAAATTTATTTCTGGAATGCCCAACTTGAGAATTCATCGTCGGTTCATTTTTGTAGAGTTGGGATTACTTTTGATTTTAT TACCAACATTGACAATAATCAGCAATGAGTTTTTATATTCTCTTTTTGTTGTAAGTGCTTTGTGGTTTATTTCGCTCATT ATCCTACTTGTTCAAATGAAGAATTTTGAAAATGGACAAATAAATAGTTTGAAAGGAGAATAG
Upstream 100 bases:
>100_bases TGCGAATCAACAGGCCTATGCATGGTTAAATACGCGTTGGGCAGAACCTGCAACTTTCTATCACAGCAATGGCTGGGTAG GCACTAGAAGTTGGTAATAA
Downstream 100 bases:
>100_bases ATGTTTGAATTAACTAATATTATAAAAGAATTTTTACATAGAAAGGTTTTTGATAACTTTAAATTAACCTTTGAAGCTGG GAAAGTTTATGCCATTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriocine Associated ABC Transporter Permease; Bacteriocin-Associated Membrane Protein; Immunity Protein
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MQMKKLKYVFLTVAIVLVTAFYAISIENKSQDIIADRLPQGALVMNNINQKSTQIPKNEQVVATLDNYAMSHQSFIVSTV VRPEGNGSFKPSYMTFGDGKLASNMRLFPKANRAENDLLGMGATYHIMTGHTSSEELSNYLSNKFHVIAVPVQRLTILGE YYNIYGNPQAVTLLISIFLAFVGLAIFVRISELRKSGIELLSGKTLLNTVFSDSIRDIKFISILTIIAMIGTSSYLLITG LSNLSLHIFALFSILFSSLIFMLLSCLVSAIIMLILSRSQLNSLIKGKLPTTVLMVLVVLMQFVVSIVLVTSLSGIHYNQ IELKKQDADLDKWKQQKDYDTISGAPNLKVSSQEVEAWWNFYNIEVTKDDAIFVRHNLFDGPEESSDEQLIVTPSYLKAQ HINVKEDFSNLKLGEYGLLIPKNQMKNRQKLIAQYDKLLTETTQNGKKETKMKAKYVEEVPNGEKRFIYNVAYEKMTTQQ EISDPIIVVITPQSSGEETGISWAGDNDYFFVKGKEQTLNRLKELGLYDKVHYLVNAYGQYEAQTNLVKESLSMAIISAI ITIIVISFFYILLHVLYFTHFRRTIVIKFISGMPNLRIHRRFIFVELGLLLILLPTLTIISNEFLYSLFVVSALWFISLI ILLVQMKNFENGQINSLKGE
Sequences:
>Translated_660_residues MQMKKLKYVFLTVAIVLVTAFYAISIENKSQDIIADRLPQGALVMNNINQKSTQIPKNEQVVATLDNYAMSHQSFIVSTV VRPEGNGSFKPSYMTFGDGKLASNMRLFPKANRAENDLLGMGATYHIMTGHTSSEELSNYLSNKFHVIAVPVQRLTILGE YYNIYGNPQAVTLLISIFLAFVGLAIFVRISELRKSGIELLSGKTLLNTVFSDSIRDIKFISILTIIAMIGTSSYLLITG LSNLSLHIFALFSILFSSLIFMLLSCLVSAIIMLILSRSQLNSLIKGKLPTTVLMVLVVLMQFVVSIVLVTSLSGIHYNQ IELKKQDADLDKWKQQKDYDTISGAPNLKVSSQEVEAWWNFYNIEVTKDDAIFVRHNLFDGPEESSDEQLIVTPSYLKAQ HINVKEDFSNLKLGEYGLLIPKNQMKNRQKLIAQYDKLLTETTQNGKKETKMKAKYVEEVPNGEKRFIYNVAYEKMTTQQ EISDPIIVVITPQSSGEETGISWAGDNDYFFVKGKEQTLNRLKELGLYDKVHYLVNAYGQYEAQTNLVKESLSMAIISAI ITIIVISFFYILLHVLYFTHFRRTIVIKFISGMPNLRIHRRFIFVELGLLLILLPTLTIISNEFLYSLFVVSALWFISLI ILLVQMKNFENGQINSLKGE >Mature_660_residues MQMKKLKYVFLTVAIVLVTAFYAISIENKSQDIIADRLPQGALVMNNINQKSTQIPKNEQVVATLDNYAMSHQSFIVSTV VRPEGNGSFKPSYMTFGDGKLASNMRLFPKANRAENDLLGMGATYHIMTGHTSSEELSNYLSNKFHVIAVPVQRLTILGE YYNIYGNPQAVTLLISIFLAFVGLAIFVRISELRKSGIELLSGKTLLNTVFSDSIRDIKFISILTIIAMIGTSSYLLITG LSNLSLHIFALFSILFSSLIFMLLSCLVSAIIMLILSRSQLNSLIKGKLPTTVLMVLVVLMQFVVSIVLVTSLSGIHYNQ IELKKQDADLDKWKQQKDYDTISGAPNLKVSSQEVEAWWNFYNIEVTKDDAIFVRHNLFDGPEESSDEQLIVTPSYLKAQ HINVKEDFSNLKLGEYGLLIPKNQMKNRQKLIAQYDKLLTETTQNGKKETKMKAKYVEEVPNGEKRFIYNVAYEKMTTQQ EISDPIIVVITPQSSGEETGISWAGDNDYFFVKGKEQTLNRLKELGLYDKVHYLVNAYGQYEAQTNLVKESLSMAIISAI ITIIVISFFYILLHVLYFTHFRRTIVIKFISGMPNLRIHRRFIFVELGLLLILLPTLTIISNEFLYSLFVVSALWFISLI ILLVQMKNFENGQINSLKGE
Specific function: Unknown
COG id: COG4652
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74701; Mature: 74701
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMKKLKYVFLTVAIVLVTAFYAISIENKSQDIIADRLPQGALVMNNINQKSTQIPKNEQ CCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCCCEEECCCCCHHCCCCCCCC VVATLDNYAMSHQSFIVSTVVRPEGNGSFKPSYMTFGDGKLASNMRLFPKANRAENDLLG EEEEHHHHHHHHHHEEEHEEECCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCCC MGATYHIMTGHTSSEELSNYLSNKFHVIAVPVQRLTILGEYYNIYGNPQAVTLLISIFLA CCCEEEEEECCCCHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVGLAIFVRISELRKSGIELLSGKTLLNTVFSDSIRDIKFISILTIIAMIGTSSYLLITG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE LSNLSLHIFALFSILFSSLIFMLLSCLVSAIIMLILSRSQLNSLIKGKLPTTVLMVLVVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MQFVVSIVLVTSLSGIHYNQIELKKQDADLDKWKQQKDYDTISGAPNLKVSSQEVEAWWN HHHHHHHHHHHHCCCCEECEEEEECCCCCHHHHHHHCCCCCCCCCCCCEECHHHHHHHHC FYNIEVTKDDAIFVRHNLFDGPEESSDEQLIVTPSYLKAQHINVKEDFSNLKLGEYGLLI EEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECHHHHHCCCCCHHHHCCCCCCCCEEEE PKNQMKNRQKLIAQYDKLLTETTQNGKKETKMKAKYVEEVPNGEKRFIYNVAYEKMTTQQ CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHH EISDPIIVVITPQSSGEETGISWAGDNDYFFVKGKEQTLNRLKELGLYDKVHYLVNAYGQ HCCCCEEEEEECCCCCCCCCCEECCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHC YEAQTNLVKESLSMAIISAIITIIVISFFYILLHVLYFTHFRRTIVIKFISGMPNLRIHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH RFIFVELGLLLILLPTLTIISNEFLYSLFVVSALWFISLIILLVQMKNFENGQINSLKGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQMKKLKYVFLTVAIVLVTAFYAISIENKSQDIIADRLPQGALVMNNINQKSTQIPKNEQ CCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCCCEEECCCCCHHCCCCCCCC VVATLDNYAMSHQSFIVSTVVRPEGNGSFKPSYMTFGDGKLASNMRLFPKANRAENDLLG EEEEHHHHHHHHHHEEEHEEECCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCCC MGATYHIMTGHTSSEELSNYLSNKFHVIAVPVQRLTILGEYYNIYGNPQAVTLLISIFLA CCCEEEEEECCCCHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVGLAIFVRISELRKSGIELLSGKTLLNTVFSDSIRDIKFISILTIIAMIGTSSYLLITG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE LSNLSLHIFALFSILFSSLIFMLLSCLVSAIIMLILSRSQLNSLIKGKLPTTVLMVLVVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MQFVVSIVLVTSLSGIHYNQIELKKQDADLDKWKQQKDYDTISGAPNLKVSSQEVEAWWN HHHHHHHHHHHHCCCCEECEEEEECCCCCHHHHHHHCCCCCCCCCCCCEECHHHHHHHHC FYNIEVTKDDAIFVRHNLFDGPEESSDEQLIVTPSYLKAQHINVKEDFSNLKLGEYGLLI EEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECHHHHHCCCCCHHHHCCCCCCCCEEEE PKNQMKNRQKLIAQYDKLLTETTQNGKKETKMKAKYVEEVPNGEKRFIYNVAYEKMTTQQ CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHH EISDPIIVVITPQSSGEETGISWAGDNDYFFVKGKEQTLNRLKELGLYDKVHYLVNAYGQ HCCCCEEEEEECCCCCCCCCCEECCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHC YEAQTNLVKESLSMAIISAIITIIVISFFYILLHVLYFTHFRRTIVIKFISGMPNLRIHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH RFIFVELGLLLILLPTLTIISNEFLYSLFVVSALWFISLIILLVQMKNFENGQINSLKGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA