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The map label for this gene is yuhB

Identifier: 15673973

GI number: 15673973

Start: 2070628

End: 2071551

Strand: Reverse

Name: yuhB

Synonym: L54059

Alternate gene names: 15673973

Gene position: 2071551-2070628 (Counterclockwise)

Preceding gene: 15673975

Following gene: 15673972

Centisome position: 87.57

GC content: 37.55

Gene sequence:

>924_bases
ATGATTACTATTACTTCTACGGCAGAAAGCCTAGAGCAAGCTAAAGCATTGCTCGAAGCTGGAGTCGACCGTTTATACAT
TGGTGAAAAAAATTATGGTTTACGCGTACCAACTGCCTTAACCAACGAAGAGATTCAAAAAATTACAGAACTTGCACATG
ATGCAGGAAAGACAGTGACTGTCGCGGTCAATGCTCTGATGCATACAGAGATGATGGCAAAAATAAAAGATTTTTTAGAT
TTCTTAGTTGAAATTAAAGCTGACCGAATTGCAGTAGGCGATGCGGGTGTGATTTTTGTTTTGCAACGTGATAAATATGA
GTTACCATTTACTTATGATGCCTCAACCATGGTTGCTTCTGCCCGCCAAGTTAATTTTTGGGCCAAACAAGGGGCAATTG
AAGCTGTTCTTGCACGTGAATTGCCAAAAGAAGAACTTGCTGATATGACCGATGAACTAGCTGTACCAGGCGAAATTTTA
GTTTATGGTGCAACAGTGATTCATCATAGCAAACGTCCATTGGTGCAAAACTATTATAATTTCATCAAGACTGAAGAAAA
AGGCAAAGACAGAGAAAGAAATCTTTTTGTCTCTGAACCTAAGAAAGTTGATACACATTATTCAATCTTTGAAGATAATC
ACGGGACGCATATTTTTGCTAATGATGATTTAGATATGATGACAGAACTTTCAGATTTAGTAGCAATGGGTTATGACCAT
TGGAAATTGGATGGAATTTTTACTCGTGGTGAAGATTTTGTAGCGATAAGCAAACTTTTTGTAGAAGCTAAAAAGCTGAT
TGAAGCAGGCGAATTTACAGAACTTAAGGCTTTCCAACTAGATGAAGAAATCCGAAAAATACATCCTGCAGGACGGACAT
TATCACACGGTTTCTATGATTTGGACAAAGATGCCATTAAATAA

Upstream 100 bases:

>100_bases
TATACTTTTTTATGAATAAATATCATTTTGAGTAGTAAATTTTAGTAAGAGGATGAATTAGAAAAAACGTGTAAGAGAAC
AATATGATATAATTATCACT

Downstream 100 bases:

>100_bases
AAAAAGAAAAGAAGTTGTTCATTTACTGACAGCTTTTTTTTGATGAAAAACTATTGTCAAAGGTTCGTAAATCATTTATA
ATTAATTTTAAATAAAATTC

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEEIQKITELAHDAGKTVTVAVNALMHTEMMAKIKDFLD
FLVEIKADRIAVGDAGVIFVLQRDKYELPFTYDASTMVASARQVNFWAKQGAIEAVLARELPKEELADMTDELAVPGEIL
VYGATVIHHSKRPLVQNYYNFIKTEEKGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDLDMMTELSDLVAMGYDH
WKLDGIFTRGEDFVAISKLFVEAKKLIEAGEFTELKAFQLDEEIRKIHPAGRTLSHGFYDLDKDAIK

Sequences:

>Translated_307_residues
MITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEEIQKITELAHDAGKTVTVAVNALMHTEMMAKIKDFLD
FLVEIKADRIAVGDAGVIFVLQRDKYELPFTYDASTMVASARQVNFWAKQGAIEAVLARELPKEELADMTDELAVPGEIL
VYGATVIHHSKRPLVQNYYNFIKTEEKGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDLDMMTELSDLVAMGYDH
WKLDGIFTRGEDFVAISKLFVEAKKLIEAGEFTELKAFQLDEEIRKIHPAGRTLSHGFYDLDKDAIK
>Mature_307_residues
MITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEEIQKITELAHDAGKTVTVAVNALMHTEMMAKIKDFLD
FLVEIKADRIAVGDAGVIFVLQRDKYELPFTYDASTMVASARQVNFWAKQGAIEAVLARELPKEELADMTDELAVPGEIL
VYGATVIHHSKRPLVQNYYNFIKTEEKGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDLDMMTELSDLVAMGYDH
WKLDGIFTRGEDFVAISKLFVEAKKLIEAGEFTELKAFQLDEEIRKIHPAGRTLSHGFYDLDKDAIK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=290, Percent_Identity=25.5172413793103, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 34649; Mature: 34649

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEEIQKITELAHDAGKTVT
CEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCHHCHHHHHHHHHHHHHCCCEEE
VAVNALMHTEMMAKIKDFLDFLVEIKADRIAVGDAGVIFVLQRDKYELPFTYDASTMVAS
EHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCEEECHHHHHHH
ARQVNFWAKQGAIEAVLARELPKEELADMTDELAVPGEILVYGATVIHHSKRPLVQNYYN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHEEECCCCCHHHHHHH
FIKTEEKGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDLDMMTELSDLVAMGYDH
HHHCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCC
WKLDGIFTRGEDFVAISKLFVEAKKLIEAGEFTELKAFQLDEEIRKIHPAGRTLSHGFYD
EEECEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
LDKDAIK
CCHHHCC
>Mature Secondary Structure
MITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEEIQKITELAHDAGKTVT
CEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCHHCHHHHHHHHHHHHHCCCEEE
VAVNALMHTEMMAKIKDFLDFLVEIKADRIAVGDAGVIFVLQRDKYELPFTYDASTMVAS
EHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCEEECHHHHHHH
ARQVNFWAKQGAIEAVLARELPKEELADMTDELAVPGEILVYGATVIHHSKRPLVQNYYN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHEEECCCCCHHHHHHH
FIKTEEKGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDLDMMTELSDLVAMGYDH
HHHCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCC
WKLDGIFTRGEDFVAISKLFVEAKKLIEAGEFTELKAFQLDEEIRKIHPAGRTLSHGFYD
EEECEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
LDKDAIK
CCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]