Click here to switch to the map view.

The map label for this gene is yugA

Identifier: 15673967

GI number: 15673967

Start: 2064540

End: 2065274

Strand: Reverse

Name: yugA

Synonym: L47971

Alternate gene names: 15673967

Gene position: 2065274-2064540 (Counterclockwise)

Preceding gene: 15673969

Following gene: 15673966

Centisome position: 87.3

GC content: 32.24

Gene sequence:

>735_bases
ATGTCCAATTTAACCAATGCTGAATCCTATACTTGGCAAATTATTCAAGAAAACTATGAGAAAATTCCACAATTATCAAT
TTCAGAATTGGCAGAATTGGCTCATGTTTCTCTCTCAACTGTCAATCGAACAGTAAGAAAAAAAGGTTTTGAAGGTTATG
GTGAATTTAGATATTCAATTCGTGAGAAAAAACTTCCTGAAATCAATGGTTTTTCCAAAGAAGTCTTGGGGGCTATTGCT
AAAAATCAAGAAGAACTTTTGAAAACAATAGAAAATATCTCTGCTGAAGAAATTGAAAAAGCTGTGGAGTTGATTCAAGA
ATCAGAGGAAATCTTAATTTTTTCACGAGGCTTATCAACAAACGTTGCTGACGAACTGATGAAAAAGTTGCAACTTTTCC
GTAAGCCCGTCAGTTTGCATGATGATTCAAAATACATGGCTTACTATGCCCGTTTTGTTAATGAAAAAAGCCTAATCATC
GTTTTATCACTTTCAGGAGAAACAGTAGAAATTTTAAATGCTCTAAATATTGCCAAAGGACAAAATCCCAAAATATTATC
CTTAACTGTTAATGCTAATACCAGTCTGACCAATCTTTCGGATATAAGTTTGATTGGTTACAAGAGTAGTCTTGAGGTGA
ATTATTTTGATTTAGATGTTCATAGTAGACTCTCATTATCCATTTTATCAAGAGTTCTAATTGATGCTTACTCCATTTAT
ACTTTAAAACAATAA

Upstream 100 bases:

>100_bases
ACGATTTCAGGGAATTATAGCAAATGTAAGCGTCAAATGTTATAATTTTAGGATAGAAAACATTTTTTGATAACAACAAG
CGAATCAATGGAGTAAAAAT

Downstream 100 bases:

>100_bases
TGCTTCGATATCAAGTCATATCGAGCTTTTTTTTATAAAAAGAGCAAAATAGAAAGGGTTTCCAAAAGATAAGCTAAAAT
TGGAAACCCTTTCTTAAATC

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSNLTNAESYTWQIIQENYEKIPQLSISELAELAHVSLSTVNRTVRKKGFEGYGEFRYSIREKKLPEINGFSKEVLGAIA
KNQEELLKTIENISAEEIEKAVELIQESEEILIFSRGLSTNVADELMKKLQLFRKPVSLHDDSKYMAYYARFVNEKSLII
VLSLSGETVEILNALNIAKGQNPKILSLTVNANTSLTNLSDISLIGYKSSLEVNYFDLDVHSRLSLSILSRVLIDAYSIY
TLKQ

Sequences:

>Translated_244_residues
MSNLTNAESYTWQIIQENYEKIPQLSISELAELAHVSLSTVNRTVRKKGFEGYGEFRYSIREKKLPEINGFSKEVLGAIA
KNQEELLKTIENISAEEIEKAVELIQESEEILIFSRGLSTNVADELMKKLQLFRKPVSLHDDSKYMAYYARFVNEKSLII
VLSLSGETVEILNALNIAKGQNPKILSLTVNANTSLTNLSDISLIGYKSSLEVNYFDLDVHSRLSLSILSRVLIDAYSIY
TLKQ
>Mature_243_residues
SNLTNAESYTWQIIQENYEKIPQLSISELAELAHVSLSTVNRTVRKKGFEGYGEFRYSIREKKLPEINGFSKEVLGAIAK
NQEELLKTIENISAEEIEKAVELIQESEEILIFSRGLSTNVADELMKKLQLFRKPVSLHDDSKYMAYYARFVNEKSLIIV
LSLSGETVEILNALNIAKGQNPKILSLTVNANTSLTNLSDISLIGYKSSLEVNYFDLDVHSRLSLSILSRVLIDAYSIYT
LKQ

Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 27604; Mature: 27473

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLTNAESYTWQIIQENYEKIPQLSISELAELAHVSLSTVNRTVRKKGFEGYGEFRYSI
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
REKKLPEINGFSKEVLGAIAKNQEELLKTIENISAEEIEKAVELIQESEEILIFSRGLST
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCC
NVADELMKKLQLFRKPVSLHDDSKYMAYYARFVNEKSLIIVLSLSGETVEILNALNIAKG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCC
QNPKILSLTVNANTSLTNLSDISLIGYKSSLEVNYFDLDVHSRLSLSILSRVLIDAYSIY
CCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHE
TLKQ
EECC
>Mature Secondary Structure 
SNLTNAESYTWQIIQENYEKIPQLSISELAELAHVSLSTVNRTVRKKGFEGYGEFRYSI
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
REKKLPEINGFSKEVLGAIAKNQEELLKTIENISAEEIEKAVELIQESEEILIFSRGLST
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCC
NVADELMKKLQLFRKPVSLHDDSKYMAYYARFVNEKSLIIVLSLSGETVEILNALNIAKG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCC
QNPKILSLTVNANTSLTNLSDISLIGYKSSLEVNYFDLDVHSRLSLSILSRVLIDAYSIY
CCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHE
TLKQ
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]