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The map label for this gene is ps316

Identifier: 15673930

GI number: 15673930

Start: 2024436

End: 2025635

Strand: Direct

Name: ps316

Synonym: L7798

Alternate gene names: 15673930

Gene position: 2024436-2025635 (Clockwise)

Preceding gene: 15673929

Following gene: 15673931

Centisome position: 85.58

GC content: 36.5

Gene sequence:

>1200_bases
ATGAACAAATTAAATATAAAAGAATACAAAACAAAAGCCGGAGAGGTGCGTTATATTCTCCGTGGCGCTTATATCGGTAC
TGATGTGCTGACAGGTAAGCAAATAAAAACAGATATTAGAGGGCGCACAAAAACAGGCGTCAAGAATGAACTAGAACGCC
TGAAAAATAATTTTAAAAAGAACGGTAACACCAAAGGTAAAGAATCACTCGAAACTTTTGAAGAGGTTGCTGAGAGCTTT
TTTGAACTTTATAAGCTGCAACGTAAAATAGGTTCTATTGACCAAATGAGATCAAATCTCGATAATTATACTTTGCCAGC
TTTTGGTAATAAGAGAATCAGCAAGATTACCACAGCACAAATACAGCAGCAAGTTATCAAATGGGGAAAAAGCGCCGCTG
CTCCTCTTAATGGGAGACAAAAGCGTACTACTGGACAAGCTAAACGATACAAGCTGCAGTTCAATATCATCAATCGCATA
TTTCAACATGCACTTTCACTTGGAATCATTGAGAACAATCCTTGTCAGTCAGTGATCGTACCCCAAGTAAAGGTGGAACA
AGCAAAAAAAGAGATAAAGTTCTACAAAAAATCGGAATTAGCAAAACTCTTTAATTACCTTGAATCTCTAAAGAGTGGCC
AGTGGTCAAATGAATACTTTAAAGCTCTTCTACGCTTGCTTGTGGCTTCTGGTTTGCGTATTGGCGAAGCTATGGCCTTA
TCATGGTCTGATATTAACTTTCAAAACCAGACTGTATCTGTCAGCAAAACCACAGTTAGACGATTTCAAATTCAAGATAC
ACCAAAAAGCAATAAAAGCAATCGAATTATTAGCATTGACGATAAGGCAATTTATGTATTAAAAAGCTGGTACTTCTTTC
AAAAGAAACACTTTATGAAGTTAGGAAATCCACAACAAAACCTAGTATTTCCAAAAATAGAAGGTGGAGTGATGGATTAT
CACAACCTTATCTACAAGCTGAATAATATAATCAAAAATGCTGAACTGCCGTTGTTGAGCTTTCATGGATTCAGGCGTTC
ACACGCTAGCCTTTGTTTAAATGCTGAAATGAGTTATAAAGTGATTCAAGAAAGGCTAGGTCATTCAAAGTTGCAATTGA
CTATGGACCTATACTCACATCTTGAGCCCGAAAAGAAGAATAAAGAGCTTGAACTATTTACTAAGTATGCCAACTTTTAA

Upstream 100 bases:

>100_bases
TAGACCAAAGAATTAAATAGTTAAAAATTTATAACTAATCAGCATAAAATTTTCATGTTCTCAATTTTGCGCACGGCCAA
ATGCAAAGAGGAGAATCAAC

Downstream 100 bases:

>100_bases
AATAGAACTCTGTTAAAAACTCTGTTAATTCTATTGTTAGATAAAAATAAAAAACTCAAACCTTTTAATATCAAAGGTTT
GAGACTAATCCGTCTATATA

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MNKLNIKEYKTKAGEVRYILRGAYIGTDVLTGKQIKTDIRGRTKTGVKNELERLKNNFKKNGNTKGKESLETFEEVAESF
FELYKLQRKIGSIDQMRSNLDNYTLPAFGNKRISKITTAQIQQQVIKWGKSAAAPLNGRQKRTTGQAKRYKLQFNIINRI
FQHALSLGIIENNPCQSVIVPQVKVEQAKKEIKFYKKSELAKLFNYLESLKSGQWSNEYFKALLRLLVASGLRIGEAMAL
SWSDINFQNQTVSVSKTTVRRFQIQDTPKSNKSNRIISIDDKAIYVLKSWYFFQKKHFMKLGNPQQNLVFPKIEGGVMDY
HNLIYKLNNIIKNAELPLLSFHGFRRSHASLCLNAEMSYKVIQERLGHSKLQLTMDLYSHLEPEKKNKELELFTKYANF

Sequences:

>Translated_399_residues
MNKLNIKEYKTKAGEVRYILRGAYIGTDVLTGKQIKTDIRGRTKTGVKNELERLKNNFKKNGNTKGKESLETFEEVAESF
FELYKLQRKIGSIDQMRSNLDNYTLPAFGNKRISKITTAQIQQQVIKWGKSAAAPLNGRQKRTTGQAKRYKLQFNIINRI
FQHALSLGIIENNPCQSVIVPQVKVEQAKKEIKFYKKSELAKLFNYLESLKSGQWSNEYFKALLRLLVASGLRIGEAMAL
SWSDINFQNQTVSVSKTTVRRFQIQDTPKSNKSNRIISIDDKAIYVLKSWYFFQKKHFMKLGNPQQNLVFPKIEGGVMDY
HNLIYKLNNIIKNAELPLLSFHGFRRSHASLCLNAEMSYKVIQERLGHSKLQLTMDLYSHLEPEKKNKELELFTKYANF
>Mature_399_residues
MNKLNIKEYKTKAGEVRYILRGAYIGTDVLTGKQIKTDIRGRTKTGVKNELERLKNNFKKNGNTKGKESLETFEEVAESF
FELYKLQRKIGSIDQMRSNLDNYTLPAFGNKRISKITTAQIQQQVIKWGKSAAAPLNGRQKRTTGQAKRYKLQFNIINRI
FQHALSLGIIENNPCQSVIVPQVKVEQAKKEIKFYKKSELAKLFNYLESLKSGQWSNEYFKALLRLLVASGLRIGEAMAL
SWSDINFQNQTVSVSKTTVRRFQIQDTPKSNKSNRIISIDDKAIYVLKSWYFFQKKHFMKLGNPQQNLVFPKIEGGVMDY
HNLIYKLNNIIKNAELPLLSFHGFRRSHASLCLNAEMSYKVIQERLGHSKLQLTMDLYSHLEPEKKNKELELFTKYANF

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46169; Mature: 46169

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLNIKEYKTKAGEVRYILRGAYIGTDVLTGKQIKTDIRGRTKTGVKNELERLKNNFKK
CCCCCCHHHHCCCCCEEEEEEHHEECCHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHC
NGNTKGKESLETFEEVAESFFELYKLQRKIGSIDQMRSNLDNYTLPAFGNKRISKITTAQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
IQQQVIKWGKSAAAPLNGRQKRTTGQAKRYKLQFNIINRIFQHALSLGIIENNPCQSVIV
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEC
PQVKVEQAKKEIKFYKKSELAKLFNYLESLKSGQWSNEYFKALLRLLVASGLRIGEAMAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
SWSDINFQNQTVSVSKTTVRRFQIQDTPKSNKSNRIISIDDKAIYVLKSWYFFQKKHFMK
EECCCCCCCCEEEEEHHHHHEEEECCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHH
LGNPQQNLVFPKIEGGVMDYHNLIYKLNNIIKNAELPLLSFHGFRRSHASLCLNAEMSYK
CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCHHEEECCCHHHH
VIQERLGHSKLQLTMDLYSHLEPEKKNKELELFTKYANF
HHHHHHCCHHEEEHHHHHHCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNKLNIKEYKTKAGEVRYILRGAYIGTDVLTGKQIKTDIRGRTKTGVKNELERLKNNFKK
CCCCCCHHHHCCCCCEEEEEEHHEECCHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHC
NGNTKGKESLETFEEVAESFFELYKLQRKIGSIDQMRSNLDNYTLPAFGNKRISKITTAQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
IQQQVIKWGKSAAAPLNGRQKRTTGQAKRYKLQFNIINRIFQHALSLGIIENNPCQSVIV
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEC
PQVKVEQAKKEIKFYKKSELAKLFNYLESLKSGQWSNEYFKALLRLLVASGLRIGEAMAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
SWSDINFQNQTVSVSKTTVRRFQIQDTPKSNKSNRIISIDDKAIYVLKSWYFFQKKHFMK
EECCCCCCCCEEEEEHHHHHEEEECCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHH
LGNPQQNLVFPKIEGGVMDYHNLIYKLNNIIKNAELPLLSFHGFRRSHASLCLNAEMSYK
CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCHHEEECCCHHHH
VIQERLGHSKLQLTMDLYSHLEPEKKNKELELFTKYANF
HHHHHHCCHHEEEHHHHHHCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]