Click here to switch to the map view.

The map label for this gene is ps313

Identifier: 15673927

GI number: 15673927

Start: 2022663

End: 2023178

Strand: Reverse

Name: ps313

Synonym: L6094

Alternate gene names: NA

Gene position: 2023178-2022663 (Counterclockwise)

Preceding gene: 15673928

Following gene: 30024067

Centisome position: 85.53

GC content: 35.27

Gene sequence:

>516_bases
ATGAAAGGCTTAGCATTTTTAACCAGTCCTGACTTGAGTAAAGCGGAAGTTGTAACTAACCATGTCGTTATTGCTGAATA
TGCAGGAATTGAAAGAAAATCAGTTCGCAGACTTATCAATAATCATAAAAATGATTTTGAAAATTTTGGTAGGTTGAGAT
TTGAAATCACCACCTTACCAGATAGTCGAGGTCAAAAAGTAAAAATCTATCAACTTAATAGAAATCAAGCCATGCTGATG
ATTACTTATCTTGATAATACTGAAGTAGTTAGAAATTTTAAAATCGCTCTTGTAAAACGATTTGATGAAATGGAAAAGGA
ACTCTATGCTCGCAAGTTTGCAAGAGCAGTTGAAAAACCCAAAGGAGTTACACTTCATCAGGCTATTTCTGAGTGGAATC
ATTACCCGCGGCATGGAAATATATGGCACACAATCATTAGAAGTCTGCTTGCTACAACTGTAACTGGACTAACCAAGAAG
CAAATTCAAGCTAGAGATATAGACTGGCGAAAATAA

Upstream 100 bases:

>100_bases
AAGTTACGATTTTAACATTTGGCCGTGCGCAAAATTGAAAGTATAAAGTCAGCCGTTGAGATACGGTATTGCGTATTAAA
CGCTAGAAAGAAATTTAATA

Downstream 100 bases:

>100_bases
AAAACGCTCCTAGACCTCTTAAATTCAGAGGAAATGGAACGTTACAAAATGCTTGAAAGTATCGCAATAGCAATGATTGA
AGCTGGTTCTGATTATGAAC

Product: prophage ps3 protein 13

Products: NA

Alternate protein names: Phage-Encoded Protein; Phage Rha Family Regulator; Phage Protein By Glimmer/Critica; Prophage Lp4 Phage-Like Repressor

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKGLAFLTSPDLSKAEVVTNHVVIAEYAGIERKSVRRLINNHKNDFENFGRLRFEITTLPDSRGQKVKIYQLNRNQAMLM
ITYLDNTEVVRNFKIALVKRFDEMEKELYARKFARAVEKPKGVTLHQAISEWNHYPRHGNIWHTIIRSLLATTVTGLTKK
QIQARDIDWRK

Sequences:

>Translated_171_residues
MKGLAFLTSPDLSKAEVVTNHVVIAEYAGIERKSVRRLINNHKNDFENFGRLRFEITTLPDSRGQKVKIYQLNRNQAMLM
ITYLDNTEVVRNFKIALVKRFDEMEKELYARKFARAVEKPKGVTLHQAISEWNHYPRHGNIWHTIIRSLLATTVTGLTKK
QIQARDIDWRK
>Mature_171_residues
MKGLAFLTSPDLSKAEVVTNHVVIAEYAGIERKSVRRLINNHKNDFENFGRLRFEITTLPDSRGQKVKIYQLNRNQAMLM
ITYLDNTEVVRNFKIALVKRFDEMEKELYARKFARAVEKPKGVTLHQAISEWNHYPRHGNIWHTIIRSLLATTVTGLTKK
QIQARDIDWRK

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20020; Mature: 20020

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLAFLTSPDLSKAEVVTNHVVIAEYAGIERKSVRRLINNHKNDFENFGRLRFEITTLP
CCCCCCCCCCCCCHHHHHHHHEEEEHHCCCCHHHHHHHHHCCCCCHHHHCEEEEEEEECC
DSRGQKVKIYQLNRNQAMLMITYLDNTEVVRNFKIALVKRFDEMEKELYARKFARAVEKP
CCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KGVTLHQAISEWNHYPRHGNIWHTIIRSLLATTVTGLTKKQIQARDIDWRK
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKGLAFLTSPDLSKAEVVTNHVVIAEYAGIERKSVRRLINNHKNDFENFGRLRFEITTLP
CCCCCCCCCCCCCHHHHHHHHEEEEHHCCCCHHHHHHHHHCCCCCHHHHCEEEEEEEECC
DSRGQKVKIYQLNRNQAMLMITYLDNTEVVRNFKIALVKRFDEMEKELYARKFARAVEKP
CCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KGVTLHQAISEWNHYPRHGNIWHTIIRSLLATTVTGLTKKQIQARDIDWRK
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA