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The map label for this gene is yrjB

Identifier: 15673715

GI number: 15673715

Start: 1790982

End: 1791752

Strand: Direct

Name: yrjB

Synonym: L174321

Alternate gene names: 15673715

Gene position: 1790982-1791752 (Clockwise)

Preceding gene: 15673714

Following gene: 15673716

Centisome position: 75.71

GC content: 36.71

Gene sequence:

>771_bases
ATGAAAGTTTCAATATTCTCCACTTGTGTGATGGACCTGATGTTTCCACAAGTTGGAATTGCCATGGTTGAAGTCCTTGA
ACGTTTGGGGATTGAAACAGATTTGCCAGAAGAACAAATTTGTTGTGGACAACCTACTTATAATTCAGGGTTAGTTAAAG
AATCCATGCCAACAATCAAAAATCAGATTGATGCTTTTGAATCTTCTGATTATGTCGTTGGGATTGCTGGTTCTTGCTCA
GGGATGTTTACAGAATATCCCCATATGTTCGACGAAAATGACCCTTATAAGCAAAAAGCAATTGATTTAGCGAATAAATC
CTATGAATTCACCCAATTTCTTTATCGGGTTTTAGGCCTTGAAGATCTTGGTGCCACATTTAATGGCGAAAAAGCAACTT
ATCACCGTTCTTGCCACATGACTAGAATTCTAGGTGAACGAGAAGCTCCATTCATTTTATTGGATAAAGTCAAAGGGCTT
GAAGTTCTTTCTCTTCCTCATTTGGAAAATTGTTGTGGCTTTGGCGGAACTTTTTCAGTTAAATCTCCTGAGATTTCAGA
GATGATGGTCACTGAAAAAACAAACGATATTCTATCAACTGGTGCTGAAATCTTAATTTCTGCTGACTTAGGCTGCTTGA
TGAATATTGGTGGAAAATTGAATCGCGAAGGTAAAAAAATAAGAGTGATGCATATTGCTGAAATTTTAAACACAAATGTC
GATTTAGAAAGAATAGATGCTGTGAAAAACCCAGCATTTATCAAAGCATAG

Upstream 100 bases:

>100_bases
TTTTTTGAAAATGTAAATAAATCGGCTTATAATGAAAGAGCATACATCTCTAGGAGATGTCTAGTTTTTAACAAAGATTT
CAAAATACTAAGGAGTGCTT

Downstream 100 bases:

>100_bases
GGGGAGAAAATGGGACTTTCTACAAGTACAAAAACTTTCGCTGAACGTTTAGAAGAGAGTAAAAAAGACCAGTTTGCTAA
AGCTGCGGTAGCCAAAGCGC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKVSIFSTCVMDLMFPQVGIAMVEVLERLGIETDLPEEQICCGQPTYNSGLVKESMPTIKNQIDAFESSDYVVGIAGSCS
GMFTEYPHMFDENDPYKQKAIDLANKSYEFTQFLYRVLGLEDLGATFNGEKATYHRSCHMTRILGEREAPFILLDKVKGL
EVLSLPHLENCCGFGGTFSVKSPEISEMMVTEKTNDILSTGAEILISADLGCLMNIGGKLNREGKKIRVMHIAEILNTNV
DLERIDAVKNPAFIKA

Sequences:

>Translated_256_residues
MKVSIFSTCVMDLMFPQVGIAMVEVLERLGIETDLPEEQICCGQPTYNSGLVKESMPTIKNQIDAFESSDYVVGIAGSCS
GMFTEYPHMFDENDPYKQKAIDLANKSYEFTQFLYRVLGLEDLGATFNGEKATYHRSCHMTRILGEREAPFILLDKVKGL
EVLSLPHLENCCGFGGTFSVKSPEISEMMVTEKTNDILSTGAEILISADLGCLMNIGGKLNREGKKIRVMHIAEILNTNV
DLERIDAVKNPAFIKA
>Mature_256_residues
MKVSIFSTCVMDLMFPQVGIAMVEVLERLGIETDLPEEQICCGQPTYNSGLVKESMPTIKNQIDAFESSDYVVGIAGSCS
GMFTEYPHMFDENDPYKQKAIDLANKSYEFTQFLYRVLGLEDLGATFNGEKATYHRSCHMTRILGEREAPFILLDKVKGL
EVLSLPHLENCCGFGGTFSVKSPEISEMMVTEKTNDILSTGAEILISADLGCLMNIGGKLNREGKKIRVMHIAEILNTNV
DLERIDAVKNPAFIKA

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutA/ykgE family [H]

Homologues:

Organism=Escherichia coli, GI1786497, Length=237, Percent_Identity=43.4599156118143, Blast_Score=209, Evalue=1e-55,
Organism=Escherichia coli, GI48994913, Length=250, Percent_Identity=24.4, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004017
- InterPro:   IPR022822 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 28397; Mature: 28397

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSIFSTCVMDLMFPQVGIAMVEVLERLGIETDLPEEQICCGQPTYNSGLVKESMPTIK
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH
NQIDAFESSDYVVGIAGSCSGMFTEYPHMFDENDPYKQKAIDLANKSYEFTQFLYRVLGL
HHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCH
EDLGATFNGEKATYHRSCHMTRILGEREAPFILLDKVKGLEVLSLPHLENCCGFGGTFSV
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCHHHHCCCCCEECC
KSPEISEMMVTEKTNDILSTGAEILISADLGCLMNIGGKLNREGKKIRVMHIAEILNTNV
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCEEEHHHHHHHHCCCC
DLERIDAVKNPAFIKA
CHHHHHHHCCCCEECC
>Mature Secondary Structure
MKVSIFSTCVMDLMFPQVGIAMVEVLERLGIETDLPEEQICCGQPTYNSGLVKESMPTIK
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH
NQIDAFESSDYVVGIAGSCSGMFTEYPHMFDENDPYKQKAIDLANKSYEFTQFLYRVLGL
HHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCH
EDLGATFNGEKATYHRSCHMTRILGEREAPFILLDKVKGLEVLSLPHLENCCGFGGTFSV
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCHHHHCCCCCEECC
KSPEISEMMVTEKTNDILSTGAEILISADLGCLMNIGGKLNREGKKIRVMHIAEILNTNV
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCEEEHHHHHHHHCCCC
DLERIDAVKNPAFIKA
CHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]